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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2545 fasta sequence
[GGGAAAAAAAAAAGAAAGAAAGAACGGAAGAGAAGGCCGCCGGCCGTCAGAACAGGAACGGGAACGGAACGGTCAGCGGCCCTTTCAACGGGAGACCCCGGCAGCACGGCATCCGTTCCCGTTCCCTTTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCCTCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG-CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC---GGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGCAATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT-CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG-TAAAATGGTATAGTTGGTGATTATTTTTATATGCAAAAGCCTGAAAAAAAAAAAAAAAAAACTCGANGGGGGGGCCCGGTNCCCATTCNCCCTATAGTTGAGTCNTATTACAATCCCTGGGCCGCCGTTTTTACCA]
[+] EMBL AK072138 [GGGAAAAAAAAAAGAAAGAAAGAACGGAAGAGAAGGCCGCCGGCCGTCAGAACAGGAACGGGAACGGAACGGTCAGCGGCCCTTTCAACGGGAGACCCCGGCAGCACGGCATCCGTTCCCGTTCCCTTTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCATCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGCAATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTT ]
[+] EMBL CB632450 [ TTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCAGCTCGCCCTCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCACTAATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTTCAGCAGC ]
[+] EMBL AK102787 [ CCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCCTCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCTATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGCAATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG TAAAATGGTATAGTTGGTGATTATTTTTATATGC ]
[+] EMBL AK105652 [ CTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCCGTAGCAATCGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG TAAAATGGTATAGTTGGTGATTATTTTTATATGC ]
[+] EMBL CB628361 [ TTGGCTTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGCAGGGAAGAAAATCACCTCCACTAATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAACGAGGAACAATGTGATGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGCATATGATAAGG ]
[+] EMBL CB663144 [ TGGATTTGTCAGGTGCTTTACCACGGTCGGCTTGATCGGATCCCCAATCCTGGGTTCCGGCGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCGCTGATTTTATATAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCACACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCAGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAGTGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAATGTGGATGATTTTTCAAGCAGCTCATTCGATGAGGAACTATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCATAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTT ]
[+] EMBL CB642599 [ TGGACCTGTCAGGTTCTTT CCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCACTGATTTTATACACGACGGTGAATACATAGTCTACAGCGTGATGGCTGCTGAATTAGTTACGCAc ]
[-] EMBL CB663145 [ TATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTTTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATTGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG TAAAATGGTATAGTTGGTGATTATTTTTAAAAAAAAAAG ]
[-] EMBL CB632451 [ GAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCAAGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCATGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTGGTATTAAG TAAAATGGTATAGTTGGTGATTAaa ]
[-] EMBL CB628362 [ CAACATTTATTTCATGGTCCAGAAAGTGAAAAATTTAGGGGTTAAAATCTTTTTTGGTGAAGATTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTTCGAGAGGGCATCGTGGAGTCAAGTTCTTTTTTTTTTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTTTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGTTTATTGAACTCAAACAGGGTGGTTTATCCCAGATGGCCAACTCCGTGAAGATGTCAGGATTTTGATATCCCTGAAAATTATACAGGCCTATTGTGATTTCATGGGAAGATACTATAGCCGCCTTGATGGCCTTAGGCCCCTAGAGGGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATTTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACCCAGTTATT TTTGATGAAAGGTGCAGTTGTAATATTTGGTTTGT ]
[+] EMBL AA752901 [ cccnTTGNTGAT ACTGGATCCGGGTGCNCAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTNCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCTTTTTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTANCTTGCAGAGTGTAGAACTTAAAACACAGTTATTCCTTGATGAAATGTGCNNTTGTAATATTTGGTTTGTATTAAGTTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTCCTGAAAAAAAAAAAAAAAAAACTCGANGGGGGGGCCCGGTNCCCATTCNCCCTATAGTTGAGTCNTATTACAATCCCTGGGCCGCCGTTTTTACCA]
consensusID : consensus_13183#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[CTGTTACTGTCNTGGTTCTAAATTTCGTNGTCACNCCCCGATGAANCTACGAGAGGGCTCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCTNNGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTANAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTTCCTGAAAAAAAA]
[+] EMBL AA752944 [CTGTTACTGTCNTGGTTCTAAATTTCGTNGTCACNCCCCGATGAANCTACGAGAGGGCTCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCTNNGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTANAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTTCCTGAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13183#0 GGGAAAAAAAAAAGAAAGAAAGAACGGAAGAGAAGGCCGCCGGCCGTCAGAACAGGAACG 60
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GGAACGGAACGGTCAGCGGCCCTTTCAACGGGAGACCCCGGCAGCACGGCATCCGTTCCC 120
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GTTCCCTTTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCA 180
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCCTCGGGTTGACTTGA 240
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTC 300
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 ACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTT 360
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CTTTACCACGGCGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAG 420
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGGGAAGAAAAT 480
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGA 540
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGA 600
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCG 660
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCT 720
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCAT 780
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 AGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTA 840
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGA 900
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAA 960
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACA 1020
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAA 1080
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTC 1140
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAG 1200
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAG 1260
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTG 1320
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGC 1380
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 AATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAA 1440
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGAC 1500
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATT 1560
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCC 1620
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGA 1680
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTAT 1740
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 GGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAAT 1800
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 TCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACAT 1860
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAAT 1920
consensus_13183#1 ------------------------------------------------------------
consensus_13183#0 CTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAG 1980
consensus_13183#1 ---------CTGTTACTGT-CNTGGTTCTAAATTTCGTNGTCACNCC--CCGATGA--AN 46
* **** ** * * * * * ** * * * ** *
consensus_13183#0 CTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGC 2040
consensus_13183#1 CTACGAGAGGGC-TCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGC 105
************ ***********************************************
consensus_13183#0 TGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTC 2100
consensus_13183#1 TGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTC 165
************************************************************
consensus_13183#0 ATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGA 2160
consensus_13183#1 ATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGA 225
************************************************************
consensus_13183#0 AGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACG 2220
consensus_13183#1 AGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCTNNGGACG 285
**************************************************** *****
consensus_13183#0 ATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGA 2280
consensus_13183#1 ATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGA 345
************************************************************
consensus_13183#0 GGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGC 2340
consensus_13183#1 GGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGC 405
************************************************************
consensus_13183#0 AGAGTGTAGAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTT 2400
consensus_13183#1 AGAGTGTANAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTT 465
******** ***************************************************
consensus_13183#0 TGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCAAAAGCCTGAAAAAAAA 2460
consensus_13183#1 TGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTTCCTGAAAAAAA 525
******************************************* * *******
consensus_13183#0 AAAAAAAAAACTCGANGGGGGGGCCCGGTNCCCATTCNCCCTATAGTTGAGTCNTATTAC 2520
consensus_13183#1 A----------------------------------------------------------- 526
*
consensus_13183#0 AATCCCTGGGCCGCCGTTTTTACCA 2545
consensus_13183#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||