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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13185#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2860 fasta sequence
[CAGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGGCCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTCGGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACGGGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGGTGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCTCGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGAAGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGGCGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCGGGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT-GCACTTCAGATTCT-GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT-GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT-GGGGATTCCAGAACACGACGTATCGCAGAGGC-ATCACTGAAGCACATTAACA-AGTTGCCA-ACTTTCTCCCA-AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGATAATCTGCAAGTCTAATGAAGGCAAAAA]
[+] EMBL AK099846 [CAGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGGCCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTCGGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACGGGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGGTGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCTCGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGAAGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGGCGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCGGGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCACTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGATAATCTGCAAGTC ]
[+] EMBL CB672899 [ AGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGGCCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTCGGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACGGGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGGTGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCTCGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGAAGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGGCGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCGGGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTG ]
[+] EMBL AK066847 [ GGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAGTCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCGTTCCACCAAGGCTGCAAGAGACCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGGTCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCACTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAAAAAAGAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTT ]
[+] EMBL CF306503 [ CGACATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTGTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGATCGCTGGTGTTGTTGAAAATGGT ]
[+] EMBL CB640118 [ ACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCT ]
[+] EMBL CB675872 [ AAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCA ]
[+] EMBL AU056255 [ TGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCTGGCACTTCAGATTCTGGGCAAATCTTCCTAAAAGGGACAGACGTCTTACCATGGGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAG CTGGGCTTACCTGG TTGGGAAG AACCACCA ]
[-] EMBL CB632057 [ ATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACATGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCACAGAGGC ATCAGTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCAgga ]
[-] EMBL CB675873 [ GATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCCCTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGA ]
[+] EMBL AU056256 [ CTTANCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCACTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGATAATCTGCAAGTCTAATGAAGGCAAAAA]
[+] EMBL BI809202 [ AATGGGGGATTCCAGAACACGACGTATCGCAGAGGCAATCACTGAAGCACATTAACACAGTTGCCACACTTTCTCCCACAATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAAaaaaaaaa ]
consensusID : consensus_13185#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 724 fasta sequence
[TGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTTTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGACGTATCGCAGAGGCATCCCTGAAGCCCATTAACAAGTTGCCAACTTTTTCCCAAATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTTTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGCCCTGCCTATCCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATAAGGTTTTCTGTACTTCTAAAAAAAAAAAAAAAAACTTAAAAGG]
[-] EMBL CB672900 [TGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTTTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGACGTATCGCAGAGGCATCCCTGAAGCCCATTAACAAGTTGCCAACTTTTTCCCAAATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTTTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGCCCTGCCTATCCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATAAGGTTTTCTGTACTTCTAAAAAAAAAAAAAAAAACTTAAAAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13185#0 CAGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGG 60
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTC 120
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACG 180
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGG 240
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCT 300
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGA 360
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGG 420
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCG 480
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCC 540
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTC 600
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTG 660
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGG 720
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAA 780
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCAC 840
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGA 900
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTG 960
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTA 1020
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 ACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAA 1080
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 ATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATA 1140
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCT 1200
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTAT 1260
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTA 1320
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAA 1380
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGT 1440
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGA 1500
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACA 1560
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTA 1620
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCTGCACTTCAGATTCTGG 1680
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CAAATCTTCCTAAAAGGGACAGACGTCTTACCATGGAGCTCATGGAGCAAGGGGCTTTCA 1740
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTG 1800
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 ATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGG 1860
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 AGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCT 1920
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATC 1980
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 TCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGT 2040
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 CTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTG 2100
consensus_13185#1 ------------------------------------------------------------
consensus_13185#0 GAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGG 2160
consensus_13185#1 --------------------------TGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGG 34
**********************************
consensus_13185#0 TTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCA 2220
consensus_13185#1 TTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCA 94
************************************************************
consensus_13185#0 CCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATG 2280
consensus_13185#1 CCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATG 154
************************************************************
consensus_13185#0 CGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGG 2340
consensus_13185#1 CGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGG 214
************************************************************
consensus_13185#0 TGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCG 2400
consensus_13185#1 TGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCG 274
************************************************************
consensus_13185#0 ACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGAC 2460
consensus_13185#1 ACCGTGGCTTGAGTTTTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGAC 334
*************** ********************************************
consensus_13185#0 GTATCGCAGAGGCATCACTGAAGCACATTAACAAGTTGCCAACTTTCTCCCAAATCATTG 2520
consensus_13185#1 GTATCGCAGAGGCATCCCTGAAGCCCATTAACAAGTTGCCAACTTTTTCCCAAATCATTG 394
**************** ******* ********************* *************
consensus_13185#0 ATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTG 2580
consensus_13185#1 ATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTTTG 454
********************************************************* **
consensus_13185#0 ATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGA 2640
consensus_13185#1 ATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGCCCTGCCTATCCCTTATGGA 514
**************************************** ********* *********
consensus_13185#0 CAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGG 2700
consensus_13185#1 CAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGG 574
************************************************************
consensus_13185#0 GATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTG 2760
consensus_13185#1 GATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTG 634
************************************************************
consensus_13185#0 CATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTAC 2820
consensus_13185#1 CATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATAAGGTTTTCTGTAC 694
*********************************************** ***********
consensus_13185#0 TTCTAATTTTGATAATCTGCAAGTCTAATGAAGGCAAAAA 2860
consensus_13185#1 TTCTAAAA--AAAAAAAAAAAAACTTAA--AAGG------ 724
****** * ** ** *** ****
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||