These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13185#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2860 fasta sequence [CAGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGGCCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTCGGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACGGGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGGTGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCTCGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGAAGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGGCGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCGGGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT-GCACTTCAGATTCT-GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT-GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT-GGGGATTCCAGAACACGACGTATCGCAGAGGC-ATCACTGAAGCACATTAACA-AGTTGCCA-ACTTTCTCCCA-AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGATAATCTGCAAGTCTAATGAAGGCAAAAA] [+] EMBL AK099846 [CAGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGGCCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTCGGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACGGGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGGTGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCTCGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGAAGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGGCGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCGGGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCACTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGATAATCTGCAAGTC ] [+] EMBL CB672899 [ AGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGGCCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTCGGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACGGGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGGTGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCTCGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGAAGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGGCGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCGGGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTG ] [+] EMBL AK066847 [ GGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCCGCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAGTCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCGTTCCACCAAGGCTGCAAGAGACCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGGTCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCACTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAAAAAAGAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTT ] [+] EMBL CF306503 [ CGACATGCTGAGGAACGGCAGCGCAAGGGTGCGTCTCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTGTATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTGTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGATCGCTGGTGTTGTTGAAAATGGT ] [+] EMBL CB640118 [ ACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGGAGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAAAGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCACAGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGAAAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTGAAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCT ] [+] EMBL CB675872 [ AAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTAACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAAATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATACAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCTCTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTATCTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTATAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCA ] [+] EMBL AU056255 [ TGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAATACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGTCAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGAGTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACATGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTAGGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCTGGCACTTCAGATTCTGGGCAAATCTTCCTAAAAGGGACAGACGTCTTACCATGGGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAG CTGGGCTTACCTGG TTGGGAAG AACCACCA ] [-] EMBL CB632057 [ ATGCAGATGAGCAAGATGCT GCACTTCAGATTCT GGCAAATCTTCCTAAAAGGGACAGACGTCTTACCAT GGAGCTCATGGAGCAAGGGGCTTTCAAATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTGATAACATGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGGAGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCTTGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATCTCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGTCTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTGGAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCACAGAGGC ATCAGTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCAgga ] [-] EMBL CB675873 [ GATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCCCTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGA ] [+] EMBL AU056256 [ CTTANCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAAT GGGGATTCCAGAACACGACGTATCGCAGAGGC ATCACTGAAGCACATTAACA AGTTGCCA ACTTTCTCCCA AATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAATTTTGATAATCTGCAAGTCTAATGAAGGCAAAAA] [+] EMBL BI809202 [ AATGGGGGATTCCAGAACACGACGTATCGCAGAGGCAATCACTGAAGCACATTAACACAGTTGCCACACTTTCTCCCACAATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTACTTCTAAaaaaaaaa ] consensusID : consensus_13185#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 724 fasta sequence [TGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTTTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGACGTATCGCAGAGGCATCCCTGAAGCCCATTAACAAGTTGCCAACTTTTTCCCAAATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTTTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGCCCTGCCTATCCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATAAGGTTTTCTGTACTTCTAAAAAAAAAAAAAAAAACTTAAAAGG] [-] EMBL CB672900 [TGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGGTTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCACCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATGCGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGGTGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCGACCGTGGCTTGAGTTTTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGACGTATCGCAGAGGCATCCCTGAAGCCCATTAACAAGTTGCCAACTTTTTCCCAAATCATTGATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTTTGATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGCCCTGCCTATCCCTTATGGACAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGGGATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTGCATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATAAGGTTTTCTGTACTTCTAAAAAAAAAAAAAAAAACTTAAAAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13185#0 CAGCTCGGCTTCTCCTCCTCCTCCTCCTCCTCCCGCGGCGTCGACGACGACGGCGAATGG 60 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CCCAGCGCCGCCAAGGATCGCAGCGCCAAGAACAAGCTTGGTGGGTTGCGGAGGGTGCTC 120 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GGGACTGGTGCGGCGAGGGGTCCGACGATGGGGAGGAGGGCGAGGAGGAGGAGGAGGACG 180 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GGGTGCTGTCGGCGTTCCTGTGCCCGATCACCATGGAGGTGATGCGGGACCCGGTGGTGG 240 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TGGAGACGGGCCACGCGTTCGAGCGGGAGGCGATCGCGCGGTGGTTCTCGGAGTGCGCCT 300 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CGCTCGGCGCGGCGCCGCGGTGCCCCGTCACGATGGAGGTGGTCGACGGCGCGGACGTGA 360 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AGCCCGTCGTGGCGCTGCGGGCGGCCATCGAGGAGTGGACGAGCAGGCGGGAGACGGCGG 420 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CGCTCCGGAGGGCGTGCCGGTGGCTCACCAAGGCCGCCTCGGAGAAGGAGGCGCTGCGCG 480 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GGCTCGACGCCGTGATGCGCGGGTGGAAGCTTGCGAGGGTCGGCAAGCGCGTCGTGCGCC 540 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GCGACGGGATGGTGCCCATGGTGGCCGCCATGCTGAGGAACGGCAGCGCAAGGGTGCGTC 600 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TCAAAGCGTTGCAAGCCCTTCGGGAGTTTGCAAGAGAGGACGATGAATACAGGGATTCTG 660 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TATCTGAAGGGGACACAATTCGCAGGATTGTTAAGTTCATCGATTTCGAGGATTGCCAGG 720 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AGAGGGAGTTGGCTGTATCTCTTCTGTGTGAGCTGTCGAAATCTGAAATGGTATGCGAAA 780 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AGATAAGCGAATTGAATGGAGCGATACTTATCTTGGGCAAGGTGGCATGTAGCAAATCAC 840 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AGAATCCAGCGTTAGCCGAGGAGGCTGAGATGACGCTTGAGAATCTGGAGAAATGCGAGA 900 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AAAATGTCCTGCAAATGGCTGAAAATGGAAGACTGGAACCTCTACTAAACCTGCTTATTG 960 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AAGGTTCTCCAGAAAAGCAGTTGCGGATAGCATCATCTCTAGAAAAGATTGTTCTGTCTA 1020 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 ACGACTTGAAAAACTTGGTGGCCCAAAGAGTGGGTTTACTGTTTGCTGGTGTTGTTGAAA 1080 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 ATGGTACCTTGCCGGCAAAAGAAGTTGCTTTCAAGGTGTTAGATCATATATCCACCAATA 1140 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CAGAAAGTGCCAAGGTTCTTATAGAGGATGGAATCCTTTTACCGCTTTTCCGAGTTCTCT 1200 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CTGTTGATGGTGTCAAATTCCTTCCACCAAGGCTGCAAGAGGCCGCTGCAGCAGTTCTAT 1260 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CTAATCTGGTAGCTTGTGGTATTGACTTTGGGACAGTCCCACTGGATGGTAATCGTACTA 1320 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TAGTGTCTGAAGACATTGTTCACAGCTTACTTCATTTGATTAGTAACACCTCTCCGCCAA 1380 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TACAGTGCAAGCTTCTTGAAATATTTGTAATGCTAAGTAGTTCTACCACAACAGTTCTGT 1440 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CAATTATCTCAGCTATAAGATCATCTGGGGCTATCACAAACTTGGTACAATTTGTAGAGA 1500 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GTGATCATCAGGAGAGCCGTGCTGCTTCCATAAAGCTGCTGTGCAAAATCTCATTTGACA 1560 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TGGACCATGAGATAGCACAAGTCCTCCGAAGTAGTCCTACATTGCTTGGATGCTTAGTTA 1620 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GGATTGTCAGTGAAAATGATGCAAATGCAGATGAGCAAGATGCTGCACTTCAGATTCTGG 1680 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CAAATCTTCCTAAAAGGGACAGACGTCTTACCATGGAGCTCATGGAGCAAGGGGCTTTCA 1740 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AATATATTGCGCGCAAAGTTTTAAACATATGTAGAAGAGGAACTGCCAATAACATAGTTG 1800 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 ATAACACGATGCTTGAAGGGCTTGTAAAAGTTCTGGCAAGGATAACGTACATTCTACGGG 1860 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 AGGAGCCACGCTGTGTTGCCCTTGCTCGTGAATACAATCTTGCTTCACTGTTTACCAGCT 1920 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TGCTTCGGCTGAATGGGCTGGATGGTGTGCAGCTGCTCTCTGCAAAGGCATTAGTGAATC 1980 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 TCTCTGTTGAATCAAGATATATGACTGGCACACCAAATTTCGATGAACATGAACAGAAGT 2040 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 CTGGGCTTACCTGGTTTGGTAAGAAACCACCAGGTATTCAACTTTGTCGTGTTCACTCTG 2100 consensus_13185#1 ------------------------------------------------------------ consensus_13185#0 GAATCTGCTCGATTAGAGACAATTTTTGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGG 2160 consensus_13185#1 --------------------------TGTATTCTTGAAGGGAAGGCAGTGGAGCGATTGG 34 ********************************** consensus_13185#0 TTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCA 2220 consensus_13185#1 TTGTTTGTCTTAGCCATCAAAACAAGAAGGTCGTTGAAGCCTCTTTGGCTGCACTTTGCA 94 ************************************************************ consensus_13185#0 CCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATG 2280 consensus_13185#1 CCCTACTTGGGGATGGCGTGGAGATCACTGAAGGTGTTTCGGTGCTCTATATGGCCAATG 154 ************************************************************ consensus_13185#0 CGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGG 2340 consensus_13185#1 CGGTTGAACCAATATTTGAAATCTTGAAGGGAAACCCAACAGGCACACTTCAGCAGAGGG 214 ************************************************************ consensus_13185#0 TGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCG 2400 consensus_13185#1 TGACATGGGCTGTCGAGAGGATTTTGCGGGCAGAGAACATTGCAAAAGCAGCTTCAAGCG 274 ************************************************************ consensus_13185#0 ACCGTGGCTTGAGTTCTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGAC 2460 consensus_13185#1 ACCGTGGCTTGAGTTTTGCCCTTGTTCATGCTTTCCAGAATGGGGATTCCAGAACACGAC 334 *************** ******************************************** consensus_13185#0 GTATCGCAGAGGCATCACTGAAGCACATTAACAAGTTGCCAACTTTCTCCCAAATCATTG 2520 consensus_13185#1 GTATCGCAGAGGCATCCCTGAAGCCCATTAACAAGTTGCCAACTTTTTCCCAAATCATTG 394 **************** ******* ********************* ************* consensus_13185#0 ATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTCTG 2580 consensus_13185#1 ATAAGCATCCCTCGAGACGAGGTTCGTCAATTGGAAGCATGGAGCGTTACTTTAGGTTTG 454 ********************************************************* ** consensus_13185#0 ATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGACCTGCCTATGCCTTATGGA 2640 consensus_13185#1 ATCGCTAGGCTATGAAATTGTGAAGTAACCGAATGCCATGCCCTGCCTATCCCTTATGGA 514 **************************************** ********* ********* consensus_13185#0 CAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGG 2700 consensus_13185#1 CAAGGAATTTTTTTGCCATTTCAAGTTAATTTTGTTGATTTGCTAACGTTTGGAATTAGG 574 ************************************************************ consensus_13185#0 GATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTG 2760 consensus_13185#1 GATTTTAGTTTTTGTGTCAGAAAAAAATAGTAGTTAGGCATTGATAGTCTTGGTAATGTG 634 ************************************************************ consensus_13185#0 CATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATATTGTTTTCTGTAC 2820 consensus_13185#1 CATATTGTTCTGTACTTGTAATAAATTTTGTAGATCATGTGTATATAAGGTTTTCTGTAC 694 *********************************************** *********** consensus_13185#0 TTCTAATTTTGATAATCTGCAAGTCTAATGAAGGCAAAAA 2860 consensus_13185#1 TTCTAAAA--AAAAAAAAAAAAACTTAA--AAGG------ 724 ****** * ** ** *** **** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||