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Oryza sativa
cluster # 13189 cluster # 13189       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13189#0 length = 1769 sequences # 11  
consensus_13189#1 length = 487 sequences # 1  

consensusID : consensus_13189#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1769
fasta sequence
                              [GGCAAGGCAGGCAGGCAGGCAGGGCTCGAGCTCCCCCTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGCGCGGTTCCGGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAATTTACGAGAAAGAATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAAACCATTGCTCAGGTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATAGTGCCATTTTTGGCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAAGCACTCTATAGCCTCTTGACGGACATAACTGAAGGCCTTGCTGGAATTGCTATTCTTCACCATTGTCTTGGTAGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGCAGATGGTATTTGGATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCTCACATCAACATCAACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAACAGTCCATTGTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTGA-TG-AAGTGAGCTATTCTGGTG-AGACTGCAAC-TTCGGG-CACCTGAGA-CAAGTTCTA-CT-AAGACT-ATGTTTTGCGTCTTT--CGTGG-AG-ATG-ATGAAGA-CCAG-TCTATT-CA-GGACA-CA--GGGGACA-CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTTTGTTGGCGCGCTAGTGCAGGAGGAATA-GTCT-TTAGGGTGTTATT-CCTTGGCCT-GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCC-CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGATTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGCTTTGAGCGATGTTATGTAT-CTAAACGTGAATGAGCATTGGTGGTGTTCTGCATATCTCGTGTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCATGGCTCTCTTACAAAAAAAAAAAAAAAACTCGAGACT]

[+] EMBL AK068107             [GGCAAGGCAGGCAGGCAGGCAGGGCTCGAGCTCCCCCTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGCGCGGTTCCGGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAATTTACGAGAAAGAATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAAACCATTGCTCAGGTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATAGTGCCATTTTTGGCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAAGCACTCTATAGCCTCTTGACGGACATAACTGGAGGCCTTGCTGGAATTGCTATTCTTCACCATTGTCTTGGTAGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGCAGATGGTATTTGGATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCTCACATCAACATCAACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAACAGTCCATTGTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTGA TG AAGTGAGCTATTCTGGTG GGACTGCAAC TTCGGG CACCTGAGA CAAGTTCTA CT AAGACT ATGTTTTGCGTCTTT  CGTGG AG ATG ATGAAGA CCAG TCTATT CA GGACA CA  GGGGACA CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTTTGTTGGCGCGCTAGTGCAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCC CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGATTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGCTTTGAGCGATGTTATGTAT CTAAACGTGAATGAGCATTGGTGGTGTTCTGCATATCTCGTGTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCA                                     ]
[+] EMBL CB673179             [   AAGGCAGGCCTGCAGGCAGGGCTCGAGCTCCCCCTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGCGCGGTTCCGGGGAAAGGGATGATTGGATCCTCAGAGCGCAAGAGATAAAGAGAAATTTACGAGAAAGAATATTCAGATTTCAAACTCAACGATGGACTGTACCTTGGACCGGAAAAACCATTGCTCAAGTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCAGGATAGTGCCATTTTTGGCTCATGCTGCTGGCTTTAACAAGGAATCATTGACACATAGGGGCCAAGCACTCTATAGCCTCTTGACAGACATAACTGAAGGCCTTGCTGGAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB646993             [                            AGCTCCCCCTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGCGCGGTTCCGGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAATTTACGAGAAAGAATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAAACCATTGCTCAGGTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATAGTGCCATTTTTGGCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAAGCACTCTATAGCCTCTTGACGGACATAACTGAAGGCCTTGCTGGAATTGCTATTCTTCACCATTGTCTTGGTAGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGCAGATGGTATTTGGATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCTCACATCAACATCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB685183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCAACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAACAGTCCATTGTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTGA TG AAGTGAGCTATTCTGGTG AGACTGCAAC TTCGGG CACCTGAGA CAAGTTCTA CT AAGACT ATGTTTTGCGTCTTT  CGTGG AG ATG ATGAAGA CCAG TCTATT CA GGACA CA  GGGGACA CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTTTGTTGGCGCGTTAGTGCAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCC CATAGTGTGGCCTCTGGAAAATAAATTCATTTAGCAAGACGGCCATTATGCAaaaaaaggg                                                                                                                                                                                                                                   ]
[-] EMBL CB646994             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAACAGTCCATTGTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTGA TG AAGTGAGCTATTCTGGTG AGACTGCAAC TTCGGG CACCTGAGA CAAGTTCTA CT AAGACT ATGTTTTGCGTCTTT  CGTGG AG ATG ATGAAGA CCAG TCTATT CA GGACA CA  GGGGACA CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTTTGTTGGCGCGCTAGTGCAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCCACGTAGTGTGGGCTCTGGAAAATAAATTCATTTAGC                                                                                                                                                                                                                                                             ]
[-] EMBL CB673180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCCCTGGGGTTTCCAGTGTAGAACAGTCCATTGTGCCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCTATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCACTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAGAGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGCAACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTGA TG AAGTGAGCTATTCTGGTG AGACTGCAAC TTCGGG CACCTGAGA CAAGTTCTA CT AAGACT ATGTTTTGCGTCTTT  CGTGG AG ATG ATGAAGA CCAG TCTATT CA GGACA CA  GGGGACA CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTTTGTTGGCGCGCTAGTGCAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCC CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGATTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGCTTTGAGCGATGTTATGTATGGTAAACGTGAATGAGCATTGGTGGTGTTCTGCA                                                                                                 ]
[+] EMBL BI811425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cCTGGGATTTGAGTGAAAGTG GCTATTCTGGTGAAGACTCCAACTTTCGGGCCACCTGAGACCAAGTTCTACCTAAAGACTAATGTTTTGCGTCTTTTCCGTGGAAGAATG ATGAAGACCCAG TCTATTCCAGGGACA CACGGGGGACACCAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGA CAGTTTGTTGGCGCGCTAGTGCAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCC CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGATTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGCTTTGAGCGATGTTATGTAT CTAAACGTGAATGAGCATTGGTGGTGTTCTGCATATCTCGTGTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCATGGCTCTCTTACAAAA                     ]
[+] EMBL BI802121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGA TG AAGTGAGCTATTCTGGTG AGACT CAAC TTCGGG CACCTGAGA CAAGTTCTA CT AAGACT ATGTTTTGCGTCTTT  CGTGG AG ATGTATGAAGA CCAGCTCTATT CA GGACACCA  GGGGACA CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTCCAGAGAAAAGACCAGTTTGTTGGCGCGCTAGT CAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAAGTACATACGCATGAGAATAAGTGTCTCATCGTGTATAGAGTTCCCATCCCGTATTAAATTGTGTATTCGTTTCC                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF326538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       G AAGTGAGCTATTCTGGTG AGACTGCAAC TTCGGG CACCTGAGA CAAGTTCTA CT AAGACT ATGTTTTGCGTCTTT  CGTGG AG ATG ATGAAGA CCAG TCTATT CA GGACA CA  GGGGACA CAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTTTGTTGGCGCGCTAGTGCAGGAGGAATA GTCT TTAGGGTGTTATT CCTTGGCCT GAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCC CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGATTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGCTTTGAGCGATGTTATGTAT CTAAACGTGAATGAGCATTGGTGGTGTTCTGCATATCTCGTGTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCATGGCTCTCTTAAAAAAAAAAAAAAAAAACTCGAGACT]
[+] EMBL BQ906331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATAGGTCTGTTAGGGTGTTATTCCCTTGGCCTGGAGGCCCAGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGTGTATAGATTTCCCATTTCGTATTAAATNGNGTATTCGTTTCC CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAaaa                                                                                                                                                                                                                                                        ]
[-] EMBL CF332138             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTCGTTTCC CCTAGTGTGGGCTCTGGAAAATAAATTCATTTAGCAAaaaa                                                                                                                                                                                                                                                       ]


>consensus_13189#0 GGCAAGGCAGGCAGGCAGGCAGGGCTCGAGCTCCCCCTTCCCACACCCATGTCCTCCTCC GCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCT CCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCC AAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCT GACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCG AGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGCGCGGTTCC GGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAATTTACGAGAAAGA ATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAAACCATTGCTCAG GTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATAGTGCCATTTTTG GCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAAGCACTCTATAGC CTCTTGACGGACATAACTGAAGGCCTTGCTGGAATTGCTATTCTTCACCATTGTCTTGGT AGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGCAGATGGTATTTG GATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCTCACATCAACATC AACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAACAGTCCATT GTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCT ATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCA CTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAG AGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGC AACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTG ATGAAGTGAGCTATTCTGGTGAGACTGCAACTTCGGGCACCTGAGACAAGTTCTACTAAG ACTATGTTTTGCGTCTTTCGTGGAGATGATGAAGACCAGTCTATTCAGGACACAGGGGAC ACAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTT TGTTGGCGCGCTAGTGCAGGAGGAATAGTCTTTAGGGTGTTATTCCTTGGCCTGAGGCCC AGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGT GTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCCCCTAGTGTGGGCTCTGGA AAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGA TTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGC TTTGAGCGATGTTATGTATCTAAACGTGAATGAGCATTGGTGGTGTTCTGCATATCTCGT GTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCATGGCTCTC TTACAAAAAAAAAAAAAAAACTCGAGACT



consensusID : consensus_13189#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 487
fasta sequence
                              [CCCACTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAAGTGAACGCTCGTGCCCGAAGTTGCAGCCCCACCAGAATAACTCGCTTCATCGAATCCAAAAACACCAAACCGTTCCATAAGATGTGCAACACCAATGACGCCAACAAATAGCGTGATCTTGCAAAGACCCCTCCCATCACAACACCATAGAAAAACGCAAGGCATAACCCTCTGTGCACTTGAAGTGTGCCAGT]

[+] EMBL CB685182             [CCCACTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAAGTGAACGCTCGTGCCCGAAGTTGCAGCCCCACCAGAATAACTCGCTTCATCGAATCCAAAAACACCAAACCGTTCCATAAGATGTGCAACACCAATGACGCCAACAAATAGCGTGATCTTGCAAAGACCCCTCCCATCACAACACCATAGAAAAACGCAAGGCATAACCCTCTGTGCACTTGAAGTGTGCCAGT]


>consensus_13189#1 CCCACTTCCCACACCCATGTCCTCCTCCGCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCT CCCGTGCTCCTCCTCCTCCTCCCCCTCTCCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAG GAGGGCGGTAGCCGCGGCTGCTCCGGCCAAGGGATGGAGGCTGGTGCGCGTCTCCTGCTT CAGGCAGGAGGATGTCCCGACGACGTCTGACGACGGGCCCGGCTTCGAGCACATCTCGCG GCCGGAGAGCTCGCGGGGCGCGGAGGCGAGTGGGGAGGAGGGGGAAGGGGAAAGTGAACG CTCGTGCCCGAAGTTGCAGCCCCACCAGAATAACTCGCTTCATCGAATCCAAAAACACCA AACCGTTCCATAAGATGTGCAACACCAATGACGCCAACAAATAGCGTGATCTTGCAAAGA CCCCTCCCATCACAACACCATAGAAAAACGCAAGGCATAACCCTCTGTGCACTTGAAGTG TGCCAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13189#0      GGCAAGGCAGGCAGGCAGGCAGGGCTCGAGCTCCCCCTTCCCACACCCATGTCCTCCTCC 60
consensus_13189#1      --------------------------------CCCACTTCCCACACCCATGTCCTCCTCC 28
                                                       *** ************************

consensus_13189#0      GCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCT 120
consensus_13189#1      GCCTCCTGCCTCGCCCCTCCCCCTCTTCGTCTCCCGTGCTCCTCCTCCTCCTCCCCCTCT 88
                       ************************************************************

consensus_13189#0      CCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCC 180
consensus_13189#1      CCCGCCGCCGCCGCGAGGTTCGGTTCTCGGAGGAGGGCGGTAGCCGCGGCTGCTCCGGCC 148
                       ************************************************************

consensus_13189#0      AAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCT 240
consensus_13189#1      AAGGGATGGAGGCTGGTGCGCGTCTCCTGCTTCAGGCAGGAGGATGTCCCGACGACGTCT 208
                       ************************************************************

consensus_13189#0      GACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCG 300
consensus_13189#1      GACGACGGGCCCGGCTTCGAGCACATCTCGCGGCCGGAGAGCTCGCGGGGCGCGGAGGCG 268
                       ************************************************************

consensus_13189#0      AGTGGGGAGGAGGGGGAAGGGGAAGGGGAAGGCTCGAGCGGGCAGCGTGAGCGCGGTTCC 360
consensus_13189#1      AGTGGGGAGGAGGGGGAAGGGGAAAGTGAACGCTCGTGCCCGAAGT-----TGCAGCCCC 323
                       ************************ * *** ***** **  * **       ** *  **

consensus_13189#0      GGGGAAAGGGATGATTGGTTCCTCAGAGCGCAAGAGATAAAGAGAAATTTACGAGAAAGA 420
consensus_13189#1      ----ACCAGAATAACTCGCTTCATCGAATCCAAAAACACCAAACCGTTCCATAAGATGTG 379
                           *   * ** * * * * *   **   *** *     * *    *  *  ***    

consensus_13189#0      ATATTCAGATTTCAGACTCAACGATGGACTGTACCTTGGACCGGAAAAACCATTGCTCAG 480
consensus_13189#1      CAACACCAATGACG---CCAACAAATAGCGTGATCTT-----GCAAAGACCCCTCCCATC 431
                         *  *  **  *     **** *    *   * ***     * *** ***  * *    

consensus_13189#0      GTCATGATTTTATGGATTGCCACATTTTGGTTTGTGGGTTCCTGGATAGTGCCATTTTTG 540
consensus_13189#1      ACAACACCATAGAAAAACGCAAGGCATAACCCTCTGTGCACTTGAAGTGTGCCAGT---- 487
                          *     *     *  ** *    *     * ** *  * ** *  ****** *    

consensus_13189#0      GCTCATGCTGCTGGCTTTAGCAAGGAATCATTGACACATAGGGGCCAAGCACTCTATAGC 600
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      CTCTTGACGGACATAACTGAAGGCCTTGCTGGAATTGCTATTCTTCACCATTGTCTTGGT 660
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      AGATTTCGTCCCCTTCCTCCAGGCTGGTTTGAGTTCAATTTGAAGGGCAGATGGTATTTG 720
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      GATGTAGCGTTGGGGTGCCTGTTATTCCCGCTGGTCAATTTTCTCTCTCACATCAACATC 780
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      AACCTAATACCAATGTCATCAGGGCCAGTCCCTGGGGTTTCCAGTGTAGAACAGTCCATT 840
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      GTGGCCCGTGATCCAGTGGCGATGGTTTTGTATGCTGTGGTGGTCACTGTATGTGCACCT 900
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      ATATGGGAAGAGATTGTGTTCCGAGGTTTCCTCCTTCCATCTCTAACGCGTTACATGCCA 960
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      CTTCCATGGTCAATCCTGGTAAGCGCTGCAGCTTTTGCACTGGCACACTTCAATGCACAG 1020
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      AGGGTTATGCCTTTGGTTTTTCTTGGTGTTGTGATGGGAGGGGTCTTTGCAAGATCACGC 1080
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      AACTTGTTGGCGTCAATGGTGTTGCACAGCCTATGGAACGGTTTTGTGTTCTTGGATTTG 1140
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      ATGAAGTGAGCTATTCTGGTGAGACTGCAACTTCGGGCACCTGAGACAAGTTCTACTAAG 1200
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      ACTATGTTTTGCGTCTTTCGTGGAGATGATGAAGACCAGTCTATTCAGGACACAGGGGAC 1260
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      ACAAGGTGGTAGTCAGATTTTTGTGGAGAAATTGTGTAGAGTAAAGAGAAAAGAGCAGTT 1320
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      TGTTGGCGCGCTAGTGCAGGAGGAATAGTCTTTAGGGTGTTATTCCTTGGCCTGAGGCCC 1380
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      AGAAGCGTCTTTGTTGCTTTCGTGTAAATTACATACGCATGAGAATAATTGTCTCATCGT 1440
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      GTATAGATTTCCCATTTCGTATTAAATTGTGTATTCGTTTCCCCTAGTGTGGGCTCTGGA 1500
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      AAATAAATTCATTTAGCAAGACGGCCACTATGCATTCGACCGATTCTTTTGCCCATTAGA 1560
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      TTAATAAGCTGTAGTGATTCTAAATTCAGAGAAAACTATCAGTATTATGTGTTGAGATGC 1620
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      TTTGAGCGATGTTATGTATCTAAACGTGAATGAGCATTGGTGGTGTTCTGCATATCTCGT 1680
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      GTGAGTTGTAAAAATCCAGGAGAATGCCTCGATCGATGGAATATTATTTTCATGGCTCTC 1740
consensus_13189#1      ------------------------------------------------------------
                                                                                   

consensus_13189#0      TTACAAAAAAAAAAAAAAAACTCGAGACT 1769
consensus_13189#1      -----------------------------
                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)