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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13193#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1519 fasta sequence
[TGAATTTGCTGAAGGAATTACTTTAGCCAAGTATGAAAAGACCTGTTTTTTTCCCCGTGTAACTCTCCTAAATTAGATAGAAGTGGATGCAATGGGCTGATTGTTCATACAAATTTAAATGGATTTGCTTTTCCTGAAAGTATCTGAATTTGTATGAGCTGTCAGGCATAACAATTCAATTGCAATTTCAAGCTATTCAGGATTCTTAGATACAGATACTTCAATTATATCACAACTTGGGTTTTTTTCTTCTGATATCTTCAATTCTGCATCTTCTTTTTTTTGGGGGTTTTGGTGCAGTTATATACTTTCCTTAGTGCTTACTAGGTGTCTCTTTTGAATGCAATGTGAGTTGTGATTATAGTACCTTTGTGTTGCAACTAGACTCTTTCTTCATGTTTAATTTAGTGATTAACCCACTTGGCAATGTTGGTTATAGTAAAAACTTGATTTCCATCATTAACTGTCTACTGTCTTCGCTGACAGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTTGCATTCTCTCAGCGAATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTGGTGGACTTGTGACTTATGAGGGCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTGCTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTGTCGCACTTGCAGGATCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTCCAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGGAAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCGAGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCCCGATCA-ACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAA-GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAGAACTTTTACTAGGTTGTTTCTTAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK058588 [TGAATTTGCTGAAGGAATTACTTTAGCCAAGTATGAAAAGACCTGTTTTTTTCCCCGTGTAACTCTCCTAAATTAGATAGAAGTGGATGCAATGGGCTGATTGTTCATACAAATTTAAATGGATTTGCTTTTCCTGAAAGTATCTGAATTTGTATGAGCTGTCAGGCATAACAATTCAATTGCAATTTCAAGCTATTCAGGATTCTTAGATACAGATACTTCAATTATATCACAACTTGGGTTTTTTTCTTCTGATATCTTCAATTCTGCATCTTCTTTTTTTTGGGGGTTTTGGTGCAGTTATATACTTTCCTTAGTGCTTACTAGGTGTCTCTTTTGAATGCAATGTGAGTTGTGATTATAGTACCTTTGTGTTGCAACTAGACTCTTTCTTCATGTTTAATTTAGTGATTAACCCACTTGGCAATGTTGGTTATAGTAAAAACTTGATTTCCATCATTAACTGTCTACTGTCTTCGCTGACAGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTTGCATTCTCTCAGCGAATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTGGTGGACTTGTGACTTATGAGGGCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTGCTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTGTCGCACTTGCAGGATCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTCCAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGGAAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCGAGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCCCGATCA ACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAA GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAGAACTTTTACTAGGTTGTTTC ]
[-] EMBL CB667360 [ TGTCGCACTCGCAGGATCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTCCAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGGAAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCGAGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCCCGATCA ACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAA GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTAACGTGAATGCTTTGATTTCAATTCGAGAACTTTTcc ]
[-] EMBL CB667359 [ GTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGGAAGGTTGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCGAGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCCCGATCA ACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAA GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGACGAATGATCTCAGCAAGATCTCTTGTTGCTGT ]
[+] EMBL BI799293 [ CCGCCATCGGAGGGCACATCCAGTGGATCTTCCGATGACTCGGTCAGCCCGATCATACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAA GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGAGCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCTCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCAGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAGAACTTTTACTAGGTTGTTTCTTAAAAAAAA ]
[-] EMBL AU065174 [ cCATGAAGGATGATGTCGGACTAACACTCTGCTCGGCCTCNAGGCGCCCCATNTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAG ]
[+] EMBL C96836 [ TGTGTTGGTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTANCTGTCATAATTAANCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTNCTGAGANCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAANTCGAGNACTTTTACTAGGTTGTTTCAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13193#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1237 fasta sequence
[ACGCGCCCGACGGGAGCATGGCGCTCGCGCTCGCCCCCATCTCCTCCGCCTCCGGCGNNGCCGCGCCGCCGCCTCCGCCGCCAGGGCACCAGCCGCACGGCTTCTCCATCAGCAGCCCGGCGTCGGATCCGAACGCCAAGCGCCGCGGCCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGCCCTAGGCTCATGGGGCATCGCCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTTGCATTCTCTCAGCG-AATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTGGTGGACTTGTGACTTATGAGGGCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTGCTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTGTCGCACTTGCAGGGTCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTCCAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGGAAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCGAGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCCCGATCAACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAAGATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCATACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAG]
[-] EMBL AU091426 [ACGCGCCCGACGGGAGCATGGCGCTCGCGCTCGCCCCCATCTCCTCCGCCTCCGGCGNNGCCGCGCCGCCGCCTCCGCCGCCAGGGCACCAGCCGCACGGCTTCTCCATCAGCAGCCCGGCGTCGGATCCGAACGCCAAGCGCCGCGGCCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGCCCTAGGCTCATGGGGCATCGCCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGGATGTTGCTTCAAAAATTATGGCCTTCTCAAAGCAAGGCCCTCGCACAGTTTGCATTCTCTCAGCGAAATGGTGCAATAAGCAATGTAACACTTC ]
[+] EMBL AK102506 [ CCGGCGTCGGATCCGAACGCCAAGCGCCGCGGCCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGCCCTAGGCTCATGGGGCATCGCCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTTGCATTCTCTCAGCG AATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTGGTGGACTTGTGACTTATGAGGGCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTGCTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTGTCGCACTTGCAGGGTCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTCCAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGGAAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCGAGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCCCGATCAACCACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAAGATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCATACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTACCGGTGGATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTAGTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAG]
[+] EMBL D42950 [ CCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGCCCTAGGCTCATGGGGCATCGTCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTTGCATTCTCTCAGCG AATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTGGTGGACTTGTGACTTATGAGGGCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTGCTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTTTCGCACTTGCAGGATCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATCCTGATGGCCG AACCCC ]
consensusID : consensus_13193#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1024 fasta sequence
[ACCTGCTCCTGCTACAGCAGCGAGCGAGCGCTAGATCTGACCAAATGGAGGCCAAGGACGTCTCGCCGCTCGTCACCGTCCCGCCCGCGGGCGGCGCCGCGCCGCCGCCGCAGGGCGGCAATGTGATGGGCATGGGCGAGCTGATGCGCAAGAAGCGCGGCCGCCCGCGCAAGTACGCGCCCGACGGGAGCATGGCGCTCGCGCTCGCCCCCATCTCCTCCGCCTCCGGCGGCGCCGCGCCGCCGCCTCCGCCGCCAGGGCACCAGCCGCACGGCTTCTCCATCAGCAGCCCGGCGTCGGATCCGAACGCCAAGCGCCGCGGCCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGCCCTAGGCTCATGGGGCATCGCCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGGTAAACCCAGATCTCAAAACAAAACGATTATCTTTTCTTCCTTCCTTCCTCCTCGATCCATCCGTGCAGCCAGCCATTGCAGAGTCTGCTGCTGCTGTACAGCAAGTGGTGATGGATCTATGTCTGCTTTTCCTGCGGAGTGGATTTGGTGCACGTACTAACTCCACTCCACTCCACTCCAGCCATGACCATGACCATCACTGGTTAGGTTGGAAAGGAACCAACCAAGGTTGCGAGACGAGGACGAGCTGCGGTGTCCGTCAGATTCCCAGCATGGCTGTCGGTTGACCGGCCCCGGCCCCACGGTCAGCGGCACAGATAGTGGGCGATGCACCTACGTTGTCGTGGACTACGTGTAGTAGTACTCCTATCATCAAGTACAACAAGCCTTCTCTGGCTGGCTGTGTAGTAGTACGCTGTCCAACAGCAAGTAGTAGTAGTAGCCACACCTGTGGACTGTGACTGTCCACAACTCCACACCTGCACTGTCTTGTTCATAGTCGGATACAATTGCCTCTACTGATAGGAACTAGGAGCACTCGCCTGCAGGAGTCTCCTGTTGTGGTGTGCTTAGAGTTCCATGTTTACTGCGCATCTGAAAAAAA]
[+] EMBL AK108363 [ACCTGCTCCTGCTACAGCAGCGAGCGAGCGCTAGATCTGACCAAATGGAGGCCAAGGACGTCTCGCCGCTCGTCACCGTCCCGCCCGCGGGCGGCGCCGCGCCGCCGCCGCAGGGCGGCAATGTGATGGGCATGGGCGAGCTGATGCGCAAGAAGCGCGGCCGCCCGCGCAAGTACGCGCCCGACGGGAGCATGGCGCTCGCGCTCGCCCCCATCTCCTCCGCCTCCGGCGGCGCCGCGCCGCCGCCTCCGCCGCCAGGGCACCAGCCGCACGGCTTCTCCATCAGCAGCCCGGCGTCGGATCCGAACGCCAAGCGCCGCGGCCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGCCCTAGGCTCATGGGGCATCGCCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGGTAAACCCAGATCTCAAAACAAAACGATTATCTTTTCTTCCTTCCTTCCTCCTCGATCCATCCGTGCAGCCAGCCATTGCAGAGTCTGCTGCTGCTGTACAGCAAGTGGTGATGGATCTATGTCTGCTTTTCCTGCGGAGTGGATTTGGTGCACGTACTAACTCCACTCCACTCCACTCCAGCCATGACCATGACCATCACTGGTTAGGTTGGAAAGGAACCAACCAAGGTTGCGAGACGAGGACGAGCTGCGGTGTCCGTCAGATTCCCAGCATGGCTGTCGGTTGACCGGCCCCGGCCCCACGGTCAGCGGCACAGATAGTGGGCGATGCACCTACGTTGTCGTGGACTACGTGTAGTAGTACTCCTATCATCAAGTACAACAAGCCTTCTCTGGCTGGCTGTGTAGTAGTACGCTGTCCAACAGCAAGTAGTAGTAGTAGCCACACCTGTGGACTGTGACTGTCCACAACTCCACACCTGCACTGTCTTGTTCATAGTCGGATACAATTGCCTCTACTGATAGGAACTAGGAGCACTCGCCTGCAGGAGTCTCCTGTTGTGGTGTGCTTAGAGTTCCATGTTTACTGCGCATCTGAAAAAAA]
consensusID : consensus_13193#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 513 fasta sequence
[GANTCAGNNCTCAACAGTGCACCNANTGCCAGTCCGGNGGGAGCCCGCCATNGGNGGGCACATCCATGATTNTCNGATGANTCGGGCAGCCCGATCAACCACAGCGGGATGCNGTACAACCANTCCGGGCAGCAGCAGCAAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGNTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAAGATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTAAAAAAAAAAAA]
[-] EMBL AA752144 [GANTCAGNNCTCAACAGTGCACCNANTGCCAGTCCGGNGGGAGCCCGCCATNGGNGGGCACATCCATGATTNTCNGATGANTCGGGCAGCCCGATCAACCACAGCGGGATGCNGTACAACCANTCCGGGCAGCAGCAGCAAACACCAGCAGCACCAGCACATGCCCCCTGCTTACGCATCCGGTGGNTGGTCGCTCTCAGCTCATCATCAGAACAGGCACGACTCTGACATGAAGATGATGTCGAACTAACACTCTGCTCGGCCTCGAGGCGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAGAGATGTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTTTATTATGTGTTGTACTAAAAAAAAAAAA]
[-] EMBL C91710 [ CATCATCAGAAAAGGCACAANTCTNACATGAAGATGATGTCGAACTAACACTCTGCTCGGCCTCNAGGCGCCCCATTTGTTTGGTTGAGCTGAAGAAGGAGCTGNTGATGGATGGTGGATCGTGTTCGTACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGNTCTCAGAGAGNTGTGTTGTNGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGTAGCTNTCATAATTAAGCCCCCTCTTACGCNAGAGTT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13193#0 TGAATTTGCTGAAGGAATTACTTTAGCCAAGTATGAAAAGACCTGTTTTTTTCCCCGTGT 60
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 ------------------------------------------------------------
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 AACTCTCCTAAATTAGATAGAAGTGGATGCAATGGGCTGATTGTTCATACAAATTTAAAT 120
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 ------------------------------------------------------------
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 GGATTTGCTTTTCCTGAAAGTATCTGAATTTGTATGAGCTGTCAGGCATAACAATTCAAT 180
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 ------------------------------------------------------------
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 TGCAATTTCAAGCTATTCAGGATTCTTAGATACAGATACTTCAATTATATCACAACTTGG 240
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 ---------------------------------------------------ACGCGCCCG 9
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 GTTTTTTTCTTCTGATATCTTCAATTCTGCATCTTCTTTTTTTTGGGGGTTTTGGTGCAG 300
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 ACGGGAGCATGGCGCTCGCGCTCGCCCC-CATCTCCTCCGCCTCCGGCGNNGCCGCGCCG 68
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 TTATATACTTT-CCTTAGTGCTTACTAGGTGTCTCTTTTGAATGCAATGTGAGTTGTGAT 359
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 CCGCCTCCGCCGCCAGGGCACCAGCCGCACGGCTTCTCCATCAGCAGCCCGGCGTCGGAT 128
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 TATAGTACCTTTGTGTTGCAACTAGACTCTTTCTTCATGTTTAATTTAGTGATTAACCCA 419
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 CCGAACGCCAA-GCGCCGCGGCCGGCCACCCGGCTCCGGCAAGAAGAAGCAGTTCGAAGC 187
consensus_13193#2 ------------------------------------------------------------
consensus_13193#0 CTTGGCAATGTTGGTTATAGTAAAAACTTGATTTCCATCATTAACTGTCTACTGTCTTCG 479
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 CCTAGGCTCATGGGGCATCGC----------CTTCACTCCTCACATCCTCACCGTCAAGG 237
consensus_13193#2 ----------------------------------------ACCTGCTCCTGCTACAGCAG 20
consensus_13193#0 CTGAC-AGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTT 538
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 CCGGCGAGGATGTTGCTTCAAAAATTATGGCCTTCTCACAGCAAGGCCCTCGCACAGTTT 297
consensus_13193#2 CGAGCGAGCGCTAGATCTGACCAAATGGAGGCCAAGGACGTCTCGCCGCTCG-----TCA 75
consensus_13193#0 GCATTCTCTCAGCGAATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTG 598
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 GCATTCTCTCAGCGAATGGTGCAATAAGCAATGTAACACTTCGGCAGCCAGCTACATCTG 357
consensus_13193#2 CCGTCCCGCCCGCGGGCGGCGCCGCGC-CGCCGCCGCAGGGCGGCAATGTGATGGGCATG 134
consensus_13193#0 GTGGACTTGTGACTTATGAGG-GCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTG 657
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 GTGGACTTGTGACTTATGAGG-GCCGATTTGAGATCATCTCTCTATCAGGTTCTTTCCTG 416
consensus_13193#2 GGCGAGCTGATGCGCAAGAAGCGCGGCCGCCCGCGCAAGTACGCGCCCGACGGGAGCATG 194
consensus_13193#0 CTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTGTCGCACTTGCAGGA 717
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 CTTGCAGAGGATGGCGACACTCGCAGCAGGACTGGTGGCCTGAGTGTCGCACTTGCAGGG 476
consensus_13193#2 GCGCTCGCGCTCGCCCCCATCTCCTCCGCCTCCGGCGGCGCCGCGCCGCCGCCTCCGCCG 254
consensus_13193#0 TCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTC 777
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 TCTGATGGCCGAGTTCTTGGTGGATGTGTAGCTGGAATGCTGATGGCCGCAACCCCTGTC 536
consensus_13193#2 CCAGGGCACCAGCCGCACGGCTTCTCCATCAGCAGCCCGGCGTCGGATCCGAACGCCAAG 314
consensus_13193#0 CAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGG 837
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 CAGGTTGTCGTGGCTAGCTTCATCGCGGAAGGTAAGAAATCGAAGCCAGTCGAGACAAGG 596
consensus_13193#2 C-----GCCGCGGCCGGCCACCCGGCTCC-GGCAAGAA---GAAGCAGTTCGAAGCCCTA 365
consensus_13193#0 AAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCG 897
consensus_13193#3 ------------GANTCAGNNC-TCAACAGT--GCA--CCNANTGCCAG-TCCGGNGG-G 41
consensus_13193#1 AAGGTCGAACCGATGTCAGCGCCTCCACAGATGGCAACCTACGTGCCAGCTCCGGTGGCG 656
consensus_13193#2 G-----GCTCATGGGGCATCGCCTTCACTCCTCACATCCTCACCGTCAAGGCCGGCGAGG 420
** * * ** ** * * ** **** * *
consensus_13193#0 -AGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCC-CGATCA 955
consensus_13193#3 -AGCCCGCCATNGGNGGGCACATCCAT--GATTNTCNGATGANTCGGGCAGCC-CGATCA 97
consensus_13193#1 -AGCCCGCCATCGGAGGGCACATCCAGTGGATCGTCCGATGACTCGGGCAGCC-CGATCA 714
consensus_13193#2 TAAACCCAGATCTCAAAACAAAACGATT--ATCTTTTCTTCCTTCCTTCCTCCTCGATCC 478
* ** ** ** * * * ** * * ** * ** *****
consensus_13193#0 ACC---ACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAA-CACCAGCAGCAC 1011
consensus_13193#3 ACC---ACAGCGGGATGCNGTACAACCANTCCGGGCAGCAGCAGCAAACACCAGCAGCAC 154
consensus_13193#1 ACC---ACAGCGGGATGCCGTACAACCACTCCGGGCAGCAGCAGCAA-CACCAGCAGCAC 770
consensus_13193#2 ATCCGTGCAGCCAGCCATTGCAGAGTCTGCTGCTGCTGTA-CAGCAAGTGGTGATGGATC 537
* * **** * * * * * ** * * ****** * *
consensus_13193#0 CA-GCACATGCCCCCTGCTTA-CGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGA 1069
consensus_13193#3 CA-GCACATGCCCCCTGCTTA-CGCATCCGGTGGNTGGTCGCTCTCAGCTCATCATCAGA 212
consensus_13193#1 CA-GCACATGCCCCCTGCTTA-CGCATCCGGTGGCTGGTCGCTCTCAGCTCATCATCAGA 828
consensus_13193#2 TATGTCTGCTTTTCCTGCGGAGTGGATTTGGTGCACGTACTAACTCCACTCCACTCCACT 597
* * ***** * * ** **** * * *** *** * **
consensus_13193#0 ACAGGCACGACTCTGAC-ATGAA-GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGG 1127
consensus_13193#3 ACAGGCACGACTCTGAC-ATGAA-GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGG 270
consensus_13193#1 ACAGGCACGACTCTGAC-ATGAA-GATGATGTCGAACTAACACTCTGCTCGGCCTCGAGG 886
consensus_13193#2 CCAGCCATGACCATGACCATCACTGGTTAGGTTGGAAAGGAACCAACCAAGGTTGCGAGA 657
*** ** *** **** ** * * * * ** * * ** * ** ****
consensus_13193#0 CGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCG 1187
consensus_13193#3 CGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCG 330
consensus_13193#1 CGCCCCATTTGTTTGGTTGGGCTGAAGAAGGAGCTGATGATGGATGGTGGATCGTGTTCA 946
consensus_13193#2 CGAGG-ACGAGCTGCGGTGTCCGTCAGATTCCCAGCATGGCTGTCGGTTGACCGGCCCCG 716
** * * * * ** * *** *** * *** ** ** *
consensus_13193#0 TACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAG-AGAT 1246
consensus_13193#3 TACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAG-AGAT 389
consensus_13193#1 TACCCCCCTCTGCTAGCTAAGAGATTTAGGACCATGGTGATGAATGATCTCAGAG-AGAT 1005
consensus_13193#2 GCCCCACGGTCAGCGGC--ACAGATAGTGGGCGATGCACCTACGTTGTCGTGGACTACGT 774
*** * ** * **** ** * *** * * ** ** * *
consensus_13193#0 GTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGT 1306
consensus_13193#3 GTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGT 449
consensus_13193#1 GTGTTGTTGCTGTTGTTTTTCCTTGGAGTAAGATTAATTTAGGCGCTGTTGTAACGCTGT 1065
consensus_13193#2 GTAGTAGTACTCCTATCATCAAGTACAACAAGCCTTCTCTGGCTGGCTGTGTAGTAGTAC 834
** * * ** * * * * * *** * * * * * **** *
consensus_13193#0 AGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTT-TATTATGTGTTGTACTACCGGTG 1365
consensus_13193#3 AGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTT-TATTATGTGTTGTACTAAAAAAA 508
consensus_13193#1 AGCTGTCATAATTAAGCCGCCTCTAACGCAAGAGTT-TATTATGTGTTGTACTACCGGTG 1124
consensus_13193#2 GCTGTCCAACAGCAAGTAGTAGTAGTAGCCACACCTGTGGACTGTGACTGTCCACAACTC 894
** * *** * ** * * * * **** * *
consensus_13193#0 GATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTA 1425
consensus_13193#3 AAAAA------------------------------------------------------- 513
consensus_13193#1 GATATGCCTTCTGCTTGTCTGTCTTGCTGAGATCTTCACCTCCTTAGTAGGCTAGTAGTA 1184
consensus_13193#2 CACACCTGCACTGTCTTGTTCATAGTCGGATACAATTGCCTCTACTGATAGGAACTAGGA 954
* *
consensus_13193#0 GTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAGAACTTTT 1485
consensus_13193#3 ------------------------------------------------------------
consensus_13193#1 GTCTACATACAGACTTGTATGAATTTACCTGAATGCTTTGATTTCAATTCGAG------- 1237
consensus_13193#2 GCACTCGCCTGCAGGAGTCTCCTGTTGTG-GTGTGCTTAGAGTTCCATGTTTACTGCGCA 1013
consensus_13193#0 ACTAGGTTGTTTCTTAAAAAAAAAAAAAAAAAAA 1519
consensus_13193#3 ----------------------------------
consensus_13193#1 ----------------------------------
consensus_13193#2 TCTGAAAAAAA----------------------- 1024
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||