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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13201#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1689 fasta sequence
[CTAAACCATAAAGTCCCCCCGTCTCATGTCGTCTCATCACTCACTTATAATCACCCCCATCCACTTAATCACGCTCTCAACGCTGCTGTGTCACGTCACGTCACGCGCGGCTCCGTAATAAGACCACCAACCTCCTCCTCCTCCCTCCCACGTTTGGAGCTCTCGTCTCGTCTCGCGGCCTCGAGCCCTCGACCAACCAACCACCCGCTTCTTCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGGGGTGGGGGCGGGAGCGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGG-AGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCATTTGCTCCTGTTTTGTCAATTCTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACATTATCAAGTGAAATCATGATGTATTTCCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK067919 [CTAAACCATAAAGTCCCCCCGTCTCATGTCGTCTCATCACTCACTTATAATCACCCCCATCCACTTAATCACGCTCTCAACGCTGCTGTGTCACGTCACGTCACGCGCGGCTCCGTAATAAGACCACCAACCTCCTCCTCCTCCCTCCCACGTTTGGAGCTCTCGTCTCGTCTCGCGGCCTCGAGCCCTCGACCAACCAACCACCCGCTTCTTCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAG AAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGGGGTGGGGGCGGGAGCGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGG AGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCATTTGCTCCTGTTTTGTCAATTCTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACA ]
[+] EMBL AU163242 [ CTCGTCTCGCGGCCTCGAGCCCTCGACCAACCAACCACCCGCTTCTTCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTNAGGCGGATGATGGCGTCGAGGGTNATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGGNCCGGGG ]
[+] EMBL AU163229 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGNGGTGGGGNCGGGANCNCGGGGCTNGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTTCCCCT ]
[+] EMBL AU108452 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCGCGGCGGGGAGGGGTGGGGGCGGGAGCNCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACANGCCGATGTCGCCGCTCCC ]
[+] EMBL AU108443 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTGAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCG GGCGGGGAGGGGTGGGGGCGGGAGCGCGGGGCTNGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACANGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGTACCGCGACCGGCGGAAGGAGGTCTTGAAGGAGA ]
[+] EMBL AU097297 [ TCTCTCCCGTCTCCCGAAACCTCCGAGAGCTCAGAAGAAAAAAGAAGAAAAAAAAGAGAAAAAAAAACTGGTGGAAACTGGAAGGTTTGCGGCGGAAACGAGGGGGAGGGATGGTGGCGAGGAGGGCGTAGGCGGGGGGTGGGGGTNAGGCGGATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATCTCGCGCGGTTCG GGCGGGGAGGGGTGGGGGCGGGA CGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACG ]
[+] EMBL OSU25283 [ TCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGG AGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCATTTGCTCCTGTTTTGTCAATTCTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACATTATCAAGTGAAATCATGATGTATTTCCTCCAga ]
[+] EMBL CK085133 [ CTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTA ]
[+] EMBL BP432990 [ ctaGAACGGGGCAGAGGTCACCGGAGGCGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAG TTATGTA CATTTGCT CTG TTTG C ATTCTTC ]
[-] EMBL CA759878 [ GAGGAAGCGGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACCTCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGGCTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCCTTAGGAAAACGTCAGCCCGAGATTTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCAGTTGCTCCTGTTTTGTCAATTTTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACCTGAGTATTTAGGTGCCCCGAAGCTTAAATGTTTGGGGTCATTTGCTACGGAGGGGAGAGTGCGTTCGAGCTACAAAAGCATTTATTTGTGTAGGGAGGGGAGAGTGCATTTTAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTGGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTTCGAGTTTTGAGTAGTTCTAAACAGGGAGCCTCTAGGTATGCTGATTTGACATTTAGTTAGGCATTACTTTTGATTCTCTGTTTGGGGCCCCGACTCAAATTGTCTGTACATACCCGTTGGATGTAAAGTCCCCTTATCAAGTGAAATCATGATGTATTTCCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA759877 [ GAGGAAGCGGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACCTCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGGCTTAAAGAGCTCAAGGAAATGGTTGTTCCAGTCATCCTTAGGAAAACGTCAGCCCGAGATTTTAGAAGAACAAACTCGATGGAGTGGTAGACGTGAGCCAAGCTCAGTTGCCATCCCCATACAGTTTATGTAGCAGTTGCTCCTGTTTTGTCAATTTTTCTGTTTTATCGGCAGTAGCCTAGTTGCGGTGAATACCTGAGTATTTAGGTGCCCCGAAGCTTAAATGTTTGGGGTCATTTGCTACGGAGGGGAGAGTGCGTTCGAGCTACAAAAGCATTTATTTGTGTAGGGAGGGGAGAGTGCATTTTAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTGGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTTCGAGTTTTGAGTAGTTCTAAACAGGGAGCCTCTAGGTATGCTGATTTGACATTTAGTTAGGCATTACTTTTGATTCTCTGTTTGGGGCCCCGACTCAAATTGTCTGTACATACCCGTTGGATGTAAAGTCCCCTTATCAAGTGAAATCATGATGTATTTCCTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU166263 [ TTATCGGCAGTAGCCTAGTTGCGGTGAATACATGAGTATTTAGGTGACACGAAGCTTAAATGTCTGGAGTCATATGCTACGGAGGGGAGAGTGCGTACGAGCTACAAAAGCAATCATATGTGTAGGGAGGGGAGAGTGCATATGAGCTATAAAAGCCATGTTCCAATTTGTCGCGGGAGTGTATTCTGTCCCATTTGTTGTCTGTTTCATTTTCAGTTTAACAATTAGGTGTAGTGAGGAAGAATTACGAGTACTGAGTAGTACTAAACAGGGTGACTCTAGGTATGCTGATATGATATCTAGTTAGGCATTACTTCTGATTCTCTGTTTGGTGCCACGACTCAAATTGTCTGTACATACACGTTGGATGTAAAGTCACATTATCAAGTGAAATCATGATGTATTTCCTCCAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||