cluster # 13213

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Oryza sativa
cluster # 13213 cluster # 13213 Sequences # 12 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13213#0 length = 1715 sequences # 9

consensus_13213#1 length = 1525 sequences # 1
consensus_13213#2 length = 591 sequences # 2

consensusID : consensus_13213#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1715
fasta sequence

                              [TTCATTCGCGAATCCTTCACGGTCGGACTCGT-CTTCTCCGGTCTCCCCAAATCGCCAAATCTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGATCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAGACTCTCTCAGGTATTGTTCACATACTGACCCCAAATATACGATCAGAAATGTCTCAGCAGAACGATGCACCTGAACAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAGCAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTCTGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGATCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAG-TGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCA-TTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACA-AGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGGGCGTATTGGCATTTCTCAAGGGTGACATACTAACCTCATCTTGCCATGTTTAGGACATTTTCTTGATTTTGGGCGGATTTAAACTCAATAAATTTCCGCTTTCCCGTCGGTAAAAAAAAA]

[+] EMBL AK072034             [TTCATTCGCGAATCCTTCACGGTCGGACTCGT CTTCTCCGGTCTCCCCAAATCGCCAAATCTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGATCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAGACTCTCTCAGGTATTGTTCACATACTGACCCCAAATATACGATCAGAAATGTCTCAGCAGAACGATGCACCTGAACAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAGCAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTCTGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGATCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAG TGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCA TTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACA AGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAACGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGG                                                                                                                        ]
[+] EMBL CB676263             [                           CTCGTCCCTTTAAAGGCTCCCCAAATCGCCAAATCTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCCTCAAAAACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACNAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCGCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGGCGCGGCCATGCCGCCGGGCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGGCATGTCGCCGGAGCAGGAGGATGGGGAGATCAATGGCATATACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAGACTCTCTCAAGCATTGTTGACATACTGACCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB645962             [                                     TCCGGTCTCCCCAAATCGCCAAATCTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAAAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGCCGCGGACATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGTGTGGACCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGGCATGTCGCCCGAGCACGAGGATGGGGAGATCAATGGCATACACAGATCGGGCCTGGATGCTCAGGTTGCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB646806             [                                                                    CTCGCCTCTACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGATCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAGACTCTCTCAGGTATTGTTCACATACTGACCCCAGATATACGATCGGAAATGTCTCAGCAGAACGATGCACCTGAACAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAGCAAAAATGGAAGATGTTCACGTGGAAGAAGCTGCTGATAACTTGCAGAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB646807             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCTGCAGCACTACAGCAAAAGATCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAG TGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCA TTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACA AGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCC                                                                                                                                                            ]
[-] EMBL CB645963             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAG TGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCA TTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACA AGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGGGCGTATTGGCATTTCTCAA                                                                                                     ]
[-] EMBL CB676264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAG TGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCA TTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACA AGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTTTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTAGTATAAGCTGCTTTTTGGGCGTATTGGCATTTCTC                                                                                                       ]
[+] EMBL BI813431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGAAGAAAAAGAGTTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCCATTAGTGC GC ATACCGAAAATT CAGCTGCTGTATCA CA CAGCTGCTGCTGGTGCACCACTTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCCAACACAGAAGTCCAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCA CCGCGCTTCTAACTTCAGCCAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACCAAAGAGGAAAGAAGCTGAAGAAAAGAAAACCAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATA CCTTATAATGTGAAAAAAAAAA CTTCAAGAATTGCCCAAAAAAaaaa                                                                                                                                                                              ]
[+] EMBL CA756227             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGATATTAAGAACCCTGTGGCTCCNAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGGGCGTATTGGCATTTCTCAAGGGTGACATACTAACCTCATCTTGCCATGTTTAGGACATTTTCTTGATTTTGGGCGGATTTAAACTCAATAAATTTCCGCTTTCCCGTCGGTAAAAAAAAA]




>consensus_13213#0
TTCATTCGCGAATCCTTCACGGTCGGACTCGTCTTCTCCGGTCTCCCCAAATCGCCAAAT
CTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGG
CAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGC
CCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAG
GCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCC
TCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCC
CGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCC
GCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTG
CTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGA
TCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAA
AGACTCTCTCAGGTATTGTTCACATACTGACCCCAAATATACGATCAGAAATGTCTCAGC
AGAACGATGCACCTGAACAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAG
CAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTC
TGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGA
TCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATA
GAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACC
AGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATT
ACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGA
AAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAA
TACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGA
TATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGG
TTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCG
CGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGA
AAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCT
CTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATA
ATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCT
ATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGGGCGTATTGGCATTTCTCAAGGGTGA
CATACTAACCTCATCTTGCCATGTTTAGGACATTTTCTTGATTTTGGGCGGATTTAAACT
CAATAAATTTCCGCTTTCCCGTCGGTAAAAAAAAA

consensusID : consensus_13213#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1525
fasta sequence

                              [CATTCGCGAATCCTTCACGGTCGGACTCGTCTTCTCCGGTCTCCCCAAGTCGCCAAATCTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGATCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAGACTCTCTCAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAGCAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTCTGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGATCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAGTTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGG]

[+] EMBL AK101627             [CATTCGCGAATCCTTCACGGTCGGACTCGTCTTCTCCGGTCTCCCCAAGTCGCCAAATCTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGATCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAGACTCTCTCAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAGCAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTCTGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGATCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAGTTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCTATTTTTACTATAAGCTGCTTTTTGG]




>consensus_13213#1
CATTCGCGAATCCTTCACGGTCGGACTCGTCTTCTCCGGTCTCCCCAAGTCGCCAAATCT
AACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGGCA
GTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGCCC
AGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAGGC
GAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCCTC
GCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCCCG
CCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCCGC
CCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTGCT
ATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGATC
AATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAAAG
ACTCTCTCAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAGCAGAAATGGA
AGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTCTGAGTCGTTT
CCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGATCAACAAGTT
CCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATAGAAAGGACTA
CAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACCAGATAGGGAC
CTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATTACTATGATGA
GATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGAAAAAGAGTGG
AAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAGT
TGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGATATCGGGAGA
AGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGGTTGATGGGGA
TATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAAC
TTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGA
AGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCT
TTTGAGTTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTATAATGTGAAAAA
AAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCCTATGTGTTGCT
ATTTTTACTATAAGCTGCTTTTTGG

consensusID : consensus_13213#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 591
fasta sequence

                              [AAAGGAACTGGAGAAGAAAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGACCGAAGCCGTGCGGTCTGGACTCTGGACGGCACGGATGGGCGGCCCTGCTATCAACAGTGCTGTGGATCTACTCCAAACAGTATGGTACAGTACACCAATATACCAGTACAGTTTACTGAATAGCCCAACCAACCAACCAAGAGATCAGTTTTCACGGCGCATTACGGCCGTTTTTAACGGTTTAACGCTAGTAGTAATCCTCTTTGCGACC]

[-] EMBL CB628912             [AAAGGAACTGGAGAAGAAAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGACCGAAGCCGTGCGGTCTGGACTCTGGACGGCACGGATGGGCGGCCCTGCTATCAACAGTGCTGTGGATCTACTCCAAACAGTATGGTACAGTACACCAATATACCAGTACAGTTTACTGAATAGCCCAACCAACCAACCAAGAGATCAGTTTTCACGGCGCATTACGGCCGTTTTTAACGGTTTAACGCTAGTAGTAATCCTCTTTGCGACC]
[+] EMBL CB628911             [        TGGACCAGAAAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAATACCGAAAATTGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCTCTCCTTTTCTTTTGAGACCGAAGCCGTGCGGTCTGGACTCTGGACGGCACGGATGGGCGGCCCTGCTATCAACAGTGCTGTGGATCTACTCCAAACAGTATGGTACAGTACACCAATATACCAGTACAGTTTACTGAATAGCCCAACCAACCAACCAAGAGATCAGTTTTCACGGCGCATTACGGCCGTTTTTAACAGTTTAACGCTAGTAGTAATCCT          ]




>consensus_13213#2
AAAGGAACTGGAGAAGAAAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGC
TCCAATTAGTGCGGCAATACCGAAAATTGCAGCAGCTGCTGCTGGTGCACCATTGGTTTC
GATATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAA
GGTTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGC
CGCGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAG
GAAAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTT
CTCTCCTTTTCTTTTGAGACCGAAGCCGTGCGGTCTGGACTCTGGACGGCACGGATGGGC
GGCCCTGCTATCAACAGTGCTGTGGATCTACTCCAAACAGTATGGTACAGTACACCAATA
TACCAGTACAGTTTACTGAATAGCCCAACCAACCAACCAAGAGATCAGTTTTCACGGCGC
ATTACGGCCGTTTTTAACGGTTTAACGCTAGTAGTAATCCTCTTTGCGACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13213#0      TTCATTCGCGAATCCTTCACGGTCGGACTCGTCTTCTCCGGTCTCCCCAAATCGCCAAAT 60
consensus_13213#1      --CATTCGCGAATCCTTCACGGTCGGACTCGTCTTCTCCGGTCTCCCCAAGTCGCCAAAT 58
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      CTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGG 120
consensus_13213#1      CTAACCTCTCGCCTCGACCCCCACCCCCTCTACGCCTCGCCATGGCGTCCGACACCAAGG 118
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      CAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGC 180
consensus_13213#1      CAGTAGCCGCTCTCTTCTCCATGTACAACGACGACGAGGAAGAGGATGACGGCGACGAGC 178
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      CCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAG 240
consensus_13213#1      CCAGACCCCCTTCGCCGCCCGCCGCCGCAACCTCCTCGTCGCCGTCACCTCAGACCGAAG 238
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      GCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCC 300
consensus_13213#1      GCGAGGGCTCAAACCCTAACCCCAACGCTGCCGCTTCTTCGGCGCCCCCATCCCCTCCCC 298
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      TCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCC 360
consensus_13213#1      TCGCCGAGGATCCGGCCGGCCGCAGAACCCTAGCCAGCCCCTACCCCTCGCCGGGGCTCC 358
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      CGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCC 420
consensus_13213#1      CGCCGCTGCCTTCGCGCCGCTCGTCCTCGCCCTTCGCGATTTCGTCCCCCTCCCCGCTCC 418
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      GCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTG 480
consensus_13213#1      GCCCCGCCGCGGCCATGCCGCCGGCCGACCTGCCGCGCCCCCCTCGGCGTGGCCCGCTTG 478
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      CTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGA 540
consensus_13213#1      CTATCGTGGACTACGCTCATGACGAAACGGCCATGTCGCCGGAGCAGGAGGATGGGGAGA 538
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      TCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAA 600
consensus_13213#1      TCAATGGCATAGACAGATCGGGTTTGGATGCTCAGGTTGCTGAGGGGAATTATGAAGAAA 598
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      AGACTCTCTCAGGTATTGTTCACATACTGACCCCAAATATACGATCAGAAATGTCTCAGC 660
consensus_13213#1      AGACTCTCTCAG------------------------------------------------ 610
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      AGAACGATGCACCTGAACAGAATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAG 720
consensus_13213#1      --------------------AATCAAGTAGGGGCAGCTGCAGCAATGAGTGTAACTGGAG 650
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      CAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTC 780
consensus_13213#1      CAGAAATGGAAGATGTTCAGGTGGAAGAAGCTGCTGATAACATGCAGAATGATGATCCTC 710
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      TGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGA 840
consensus_13213#1      TGAGTCGTTTCCTTCCTCCTCCTGTGACTGCAAAATGTTCTGCAGCACTACAGCAAAAGA 770
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      TCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATA 900
consensus_13213#1      TCAACAAGTTCCTTGCGTACAAAAGGGCTGGAAAGAGCTTCAATTCTGAAGTGCGCAATA 830
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      GAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACC 960
consensus_13213#1      GAAAGGACTACAGGAATCCAGACTTTTTGCAGCATGCTGTGCGGTACCAAGAAATTGACC 890
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      AGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATT 1020
consensus_13213#1      AGATAGGGACCTGCTTCAGTAAAGATGTTTTTGATCCTTATGGGTACGATAGAAGCGATT 950
consensus_13213#2      ------------------------------------------------------------
                                                                                   

consensus_13213#0      ACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGA 1080
consensus_13213#1      ACTATGATGAGATCGAAGCTGATATGAAGCGTGAAGTTGAGAGAAAGGAACTGGAGAAGA 1010
consensus_13213#2      -------------------------------------------AAAGGAACTGGAGAAGA 17
                                                                  *****************

consensus_13213#0      AAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAA 1140
consensus_13213#1      AAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAA 1070
consensus_13213#2      AAAAGAGTGGAAAGGTTGACTTTATCACTGGAGGAGTACAAGCTCCAATTAGTGCGGCAA 77
                       ************************************************************

consensus_13213#0      TACCGAAAATTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGA 1200
consensus_13213#1      TACCGAAAGTTGCAGCTGCTGTATCAGCAGCAGCTGCTGCTGGTGCACCATTGGTTTCGA 1130
consensus_13213#2      TACCGAAAATTGCAGC---------------AGCTGCTGCTGGTGCACCATTGGTTTCGA 122
                       ******** *******               *****************************

consensus_13213#0      TATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGG 1260
consensus_13213#1      TATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGG 1190
consensus_13213#2      TATCGGGAGAAGGCGTACAGAAAGAGGCTAGGCCAAACAAGAAGTCAAAATGGGATAAGG 182
                       ************************************************************

consensus_13213#0      TTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCG 1320
consensus_13213#1      TTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCG 1250
consensus_13213#2      TTGATGGGGATATTAAGAACCCTGTGGCTCCAAGTGGACTTGATAATTTGTCAGCAGCCG 242
                       ************************************************************

consensus_13213#0      CGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGA 1380
consensus_13213#1      CGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGA 1310
consensus_13213#2      CGCTTCTAACTTCAGCAAATGTTGGTGCTGGATACGCTGCTTTTGCGCAACAAAAGAGGA 302
                       ************************************************************

consensus_13213#0      AAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCT 1440
consensus_13213#1      AAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCT 1370
consensus_13213#2      AAGAAGCTGAAGAAAAGAAAACAAGCGATCATAAGTCAGACAGAAGATCGTAGTGCTTCT 362
                       ************************************************************

consensus_13213#0      CTCCTTTTCTTTTGAG-TTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTAT 1499
consensus_13213#1      CTCCTTTTCTTTTGAG-TTAAGGATGTACTATTTGGAGGTTTTCAATTACATAGCCTTAT 1429
consensus_13213#2      CTCCTTTTCTTTTGAGACCGAAGCCGTGCGGTCTGGA--CTCTGGACGGCACGGATGGGC 420
                       ****************    * *  ** *  * ****   * *  *   **  *      

consensus_13213#0      AATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCC 1559
consensus_13213#1      AATGTGAAAAAAAAAACCTTCAAGAATTGGCCAAAAAACATGCTTACACAATGTGTTCCC 1489
consensus_13213#2      GGCCCTGCTATCAACAGTGCTGTGGATCTACTCCAAA-CAGTATGGTACAGTACA---CC 476
                                *  ** *       * **   *   *** **   *   *** *      **

consensus_13213#0      TATGTGTTGCTATT-TTTACT--ATAAGCTGCTTTTTGGGCGTATTGGCATTTCTCAAGG 1616
consensus_13213#1      TATGTGTTGCTATT-TTTACT--ATAAGCTGCTTTTTGG--------------------- 1525
consensus_13213#2      AATATACCAGTACAGTTTACTGAATAGCCCAACCAACCAACCAAGAGATCAGTTTTCACG 536
                        ** *     **   ******  ***  *                               

consensus_13213#0      GTGACATACTAACCTCATCTTGCCATGTTTAGGACATTTTCTTGATTTTGGGCGGATTTA 1676
consensus_13213#1      ------------------------------------------------------------
consensus_13213#2      GCGCATTACGGCCGT--TTTTAACGGTTTAACGCTAGTAGTAATCCTCTTTGCGACC--- 591
                                                                                   

consensus_13213#0      AACTCAATAAATTTCCGCTTTCCCGTCGGTAAAAAAAAA 1715
consensus_13213#1      ---------------------------------------
consensus_13213#2      ---------------------------------------