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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13218#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3379 fasta sequence
[CCGAGATGCTCGACCTCACGCCGCACGCCGTGCCCACCATTGACCAGCGCGAGGCGCTCGCCGTCGGCACCGACGTGCGCACGCTCTTCCGCTCGCACAGCTTCGTCGCGCTGCAGAAGGCCGCCACCTTCGGGGACGTCAACCTGCTCAACCCCATCCTCGTCCACGCCAGGACCTCCGGGAAGCCCTTCTACGCCATCATGCACCGCATCGACGTCGGCCTCGTCATCGACCTCGAGCCGGTCAACCCCGTCGACCTGCCCGTCACCGCCACAGGCGCGATCAAGTCGTACAAGCTCGCTGCCAGGGCCATCGCCAGGCTGCAGTCCCTGCCCAGTGGGAACCTCTCCCTGCTGTGCGACGTGCTGGTCCGCGAGGTGAGCGAGCTCACTGGCTATGACAGGGTGATGGCGTACAAGTTCCATGAGGATGAGCATGGTGAGGTGATTGCTGAGTGCAAGAGATCTGATTTGGAGCCGTATCTTGGCCTGCACTACCCAGCCACTGACATTCCTCAGGCATCCAGGTTTTTGTTCATGAAGAACAAAGTGCGGATGATATGCGATTGCTCCGCAACGCCTGTGAAGATCATCCAAGATGACAGCCTAACACAACCTATAAGCATATGCGGATCTACTCTCAGGGCACCCCATGGTTGCCATGCACAGTACATGGCAAGCATGGGCTCCGTTGCATCACTTGTGATGTCGGTCACTATAAATGAGGATGAGGATGATGATGGAGACACTGGGAGTGACCAGCAGCCGAAAGGGAGGAAGCTGTGGGGGTTGATGGTCTGCCATCACACAAGCCCGAGGTTTGTCCCTTTCCCGCTTAGGTATGCTTGCGAGTTTCTCTTGCAAGTATTTGGGATACAGATCAACAAGGAGGTGGAACTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCCGCACGCAGACTCTTCTCTGTGATATGCTCCTTCGAGATGCTCCTGTTGGGATATTTACCCAATCACCTAACGTAATGGATCTAGTGAAATGTGATGGTGCAGCATTGTATTACCAAAACCAGCTTTGGGTGCTAGGATCAACGCCCTCTGAAGCAGAGATAAAAAACATTGTTGCTTGGTTGCAGGAGTACCATGACGGTTCTACTGGATTGAGTACCGACAGCTTAGTTGAAGCAGGTTATCCTGGCGCTGCTGCACTTGGTGATGTTGTGTGTGGCATGGCAGCTATAAAGATCTCTTCAAAAGATTTCATCTTCTGGTTCCGATCCCACACGGCAAAGGAGATTAAATGGGGAGGAGCTAAGCATGAACCAATTGATGCAGATGACAATGGTAGGAAGATGCATCCACGATCTTCATTCAAAGCCTTCTTGGAGGTAGTTAAATGGAGGAGTGTTCCTTGGGAGGATGTTGAAATGGATGCTATCCATTCTCTGCAGCTAATATTACGTGGCTCCTTGCAAGATGAAGATGCCAACAAGAACAACAATGCAAAGTCCATTGTTACAGCTCCATCTGATGATATGAAGAAGATTCAGGGGCTCCTTGAACTGAGAACCGTTACAAACGAGATGGTGCGCCTAATTGAGACAGCAACTGCGCCTATCTTGGCTGTTGACATCACTGGGAGCATAAACGGATGGAATAATAAGGCTGCAGAACTCACTGGATTACCTGTCATGGAAGCCATAGGGAAGCCTCTGGTCGATCTCGTCATCGATGATTCTGTTGAAGTGGTTAAGCAAATTTTAAATTCAGCTTTACAAGGAATAGAAGAGCAAAATCTGCAAATTAAGCTTAAAACATTTAATCACCAGGAAAATAATGGACCTGTAATTTTGATGGTTAACGCCTGCTGCAGTCGTGACCTTTCAGAGAAAGTTGTGGGGGTTTGCTTTGTAGCACAAGATATGACAGGGCAGAACATTATCATGGATAAGTACACTCGGATACAAGGGGACTATGTTGCTATAGTAAAGAACCCTTCGGAGCTCATCCCCCCTATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAAAAAATTACTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATTAATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCTTTTTGGTTTCTTCAACACCGATGGCAAGTACATAGAGTCACTGATGACAGCAACCAAGAGGACAGATGCTGAGGGTAAGATCACTGGCGCCCTTTGCTTTCTTCATGTGGCCAGCCCAGAGCTTCAACATGCTCTGCAGGTGCAGAAGATGTCTGAACAAGCTGCTATGAACAGCTTTAAGGAACTGACATACATACGTCAAGAATTAAGGAACCCACTCAATGGCATGCAATTTACTCGAAATTTGTTGGAACCTTCTGACTTGACTGAGGAGCAGAGGAAACTTCTAGCATCAAATGTCCTCTGTCAAGAACAGCTGAAAAAGATTTTACATGACACTGATCTAGAAAGCATTGAACAGTGCTACACGGAGATGAGCACCGTAGATTTCAACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCAGAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCACCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCATGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGGCGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGGCCTTGGCCTTTACATAAGCCAGAAGCTCGTGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGA-GCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCTTCACTTGTGTTGTCAAAAAAAAA]
[+] EMBL AB018442 [CCGAGATGCTCGACCTCACGCCGCACGCCGTGCCCACCATTGACCAGCGCGAGGCGCTCGCCGTCGGCACCGACGTGCGCACGCTCTTCCGCTCGCACAGCTTCGTCGCGCTGCAGAAGGCCGCCACCTTCGGGGACGTCAACCTGCTCAACCCCATCCTCGTCCACGCCAGGACCTCCGGGAAGCCCTTCTACGCCATCATGCACCGCATCGACGTCGGCCTCGTCATCGACCTCGAGCCGGTCAACCCCGTCGACCTGCCCGTCACCGCCACAGGCGCGATCAAGTCGTACAAGCTCGCTGCCAGGGCCATCGCCAGGCTGCAGTCCCTGCCCAGTGGGAACCTCTCCCTGCTGTGCGACGTGCTGGTCCGCGAGGTGAGCGAGCTCACTGGCTATGACAGGGTGATGGCGTACAAGTTCCATGAGGATGAGCATGGTGAGGTGATTGCTGAGTGCAAGAGATCTGATTTGGAGCCGTATCTTGGCCTGCACTACCCAGCCACTGACATTCCTCAGGCATCCAGGTTTTTGTTCATGAAGAACAAAGTGCGGATGATATGCGATTGCTCCGCAACGCCTGTGAAGATCATCCAAGATGACAGCCTAACACAACCTATAAGCATATGCGGATCTACTCTCAGGGCACCCCATGGTTGCCATGCACAGTACATGGCAAGCATGGGCTCCGTTGCATCACTTGTGATGTCGGTCACTATAAATGAGGATGAGGATGATGATGGAGACACTGGGAGTGACCAGCAGCCGAAAGGGAGGAAGCTGTGGGGGTTGATGGTCTGCCATCACACAAGCCCGAGGTTTGTCCCTTTCCCGCTTAGGTATGCTTGCGAGTTTCTCTTGCAAGTATTTGGGATACAGATCAACAAGGAGGTGGAACTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCCGCACGCAGACTCTTCTCTGTGATATGCTCCTTCGAGATGCTCCTGTTGGGATATTTACCCAATCACCTAACGTAATGGATCTAGTGAAATGTGATGGTGCAGCATTGTATTACCAAAACCAGCTTTGGGTGCTAGGATCAACGCCCTCTGAAGCAGAGATAAAAAACATTGTTGCTTGGTTGCAGGAGTACCATGACGGTTCTACTGGATTGAGTACCGACAGCTTAGTTGAAGCAGGTTATCCTGGCGCTGCTGCACTTGGTGATGTTGTGTGTGGCATGGCAGCTATAAAGATCTCTTCAAAAGATTTCATCTTCTGGTTCCGATCCCACACGGCAAAGGAGATTAAATGGGGAGGAGCTAAGCATGAACCAATTGATGCAGATGACAATGGTAGGAAGATGCATCCACGATCTTCATTCAAAGCCTTCTTGGAGGTAGTTAAATGGAGGAGTGTTCCTTGGGAGGATGTTGAAATGGATGCTATCCATTCTCTGCAGCTAATATTACGTGGCTCCTTGCAAGATGAAGATGCCAACAAGAACAACAATGCAAAGTCCATTGTTACAGCTCCATCTGATGATATGAAGAAGATTCAGGGGCTCCTTGAACTGAGAACCGTTACAAACGAGATGGTGCGCCTAATTGAGACAGCAACTGCGCCTATCTTGGCTGTTGACATCACTGGGAGCATAAACGGATGGAATAATAAGGCTGCAGAACTCACTGGATTACCTGTCATGGAAGCCATAGGGAAGCCTCTGGTCGATCTCGTCATCGATGATTCTGTTGAAGTGGTTAAGCAAATTTTAAATTCAGCTTTACAAGGAATAGAAGAGCAAAATCTGCAAATTAAGCTTAAAACATTTAATCACCAGGAAAATAATGGACCTGTAATTTTGATGGTTAACGCCTGCTGCAGTCGTGACCTTTCAGAGAAAGTTGTGGGGGTTTGCTTTGTAGCACAAGATATGACAGGGCAGAACATTATCATGGATAAGTACACTCGGATACAAGGGGACTATGTTGCTATAGTAAAGAACCCTTCGGAGCTCATCCCCCCTATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAAAAAATTACTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATTAATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCTTTTTGGTTTCTTCAACACCGATGGCAAGTACATAGAGTCACTGATGACAGCAACCAAGAGGACAGATGCTGAGGGTAAGATCACTGGCGCCCTTTGCTTTCTTCATGTGGCCAGCCCAGAGCTTCAACATGCTCTGCAGGTGCAGAAGATGTCTGAACAAGCTGCTATGAACAGCTTTAAGGAACTGACATACATACGTCAAGAATTAAGGAACCCACTCAATGGCATGCAATTTACTCGAAATTTGTTGGAACCTTCTGACTTGACTGAGGAGCAGAGGAAACTTCTAGCATCAAATGTCCTCTGTCAAGAACAGCTGAAAAAGATTTTACATGACACTGATCTAGAAAGCATTGAACAGTGCTACACGGAGATGAGCACCGTAGATTTCAACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCAGAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCACCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCATGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGGCGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGGCCTTGGCCTTTACATAAGCCAGAAGCTCGTGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGA GCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCTTCACTTGT ]
[+] EMBL CB626698 [ ATTAAATGGGGAGGAGCTAAGCATGAACCAATTGATGCAGATGACAATGGTAGGAAGATGCATCCACGATCTTCATTCAAAGCCTTCTTGGAGGTAGTTAAATGGAGGAGTGTTCCTTGGGAGGATGTTGAAATGGATGCTATCCATTCTCTGCAGCTAATATTACGTGGCTCCTTGCAAGATGAAGATGCCAACAAGAACAACAATGCAAAGTCCATTGTTACAGCTCCATCTGATGATATGAAGAAGATTCAGGGGCTCCTTGAACTGAGAACCGTTACAAACGAGATGGTGCGCCTAATTGAGACAGCAACTGCGCCTATCTTGGCTGTTGACATCACTGGGAGCATAAACGGATGGAATAATAAGGCTGCAGAACTCACTGGATTACCTGTCATGGAAGCCATAGGGAAGCCTCTGGTCGATCTCGTCATCGATGATTCTGTTGAAGTGGTTAAGCAAATTTTAAATTCAGCTTTACAAGGAATAGAAGAGCAAAATCTGCAAATTAAGCTTAAAACATTTAATCACCAGGAAAATAATGGACCTGTAATTTTGATGGTTAACGCCTGCTGCAGTCGTGACCTTTCAGAGAAAGTTGTGGGGGTTTGCTTTGTAGCACAAGATATGACAGGGCAGAACATTATCATGGATAAGTACACTCGGATACAAGGGGACTATGTTGCTATAGTAAAGAACCCTTCGGAGCTCATCCCCCCTATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAAAAAATTACTGGTATAAAGAGGGAAGATGCAGTAGATAAATT ]
[+] EMBL CB662419 [ GCTCCTTGCAAGATGAAGATGCCAACAAGAACAACAATGCAAAGTCCATTGTTACAGCTCCATCTGATGATATGAAGAAGATTCAGGGGCTCCTTGAACTGAGAACCGTTACAAACGAGATGGTGCGCCTAATTGAGACAGCAACTGCGCCTATCTTGGCTGTTGACATCACTGGGAGCATAAACGGATGGAATAATAAGGCTGCAGAACTCACTGGATTACCTGTCATGGAAGCCATAGGGAAGCCTCTGGTCGATCTCGTCATCGATGATTCTGTTGAAGTGGTTAAGCAAATTTTAAATTCAGCTTTACAAGGAATAGAAGAGCAAAATCTGCAAATTAAGCTTAAAACATTTAATCACCAGGAAAATAATGGACCTGTAATTTTGATGGTTAACGCCTGCTGCAGTCGTGACCTTTCAGAGAAAGTTGTGGGGGTTTGCTTTGTAGCACAAGATATGACAGGGCAGAACATTATCATGGATAAGTACACTCGGATACAAGGGGACTATGTTGCTATAGTAAAGAACCCTTCGGAGCTCATCCCCCCTATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAAAAAATTACTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATTAATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCT ]
[+] EMBL AU172308 [ GCAAATTAAGCTTAAAACATTTAATCACCAGGAAAATAATGGACCTGTAATTTTGATGGTTAACGCCTGCTGCAGTCGTGACCTTTCAGAGAAAGTTGTGGGGGTTTGCTTTGTAGCACAAGATATGACAGGGCAGAACATTATCATGGATAAGTACACTCGGATACAAGGGGACTATGTTGCTATAGTAAAGAACCCTTCGGAGCTCATCCCCCCTATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAAAAAATTACTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATTAATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCTT ]
[-] EMBL CB626699 [ GAACAGTGCTACACGGAGATGAGCACCGTAGATTTCAACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCAGAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCACCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCACGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGGCGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGGCCTTGGCCTTTACATAAGCCAGAAGCTCGTGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAAGCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTTGGATAGATGTATTGGTCACGTTGATGTCTGGAGA GCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTGTGAATAAAATCTTCACTTGT ]
[-] EMBL CB662420 [ ACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCAGAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCACCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCATGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGGCGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGGCCTTGGCCTTTACATAACCCAGAAGCTCGTGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATCAGCAGATCAGCCAGTCTGAGGAGTACGTTAGCTGAAGACGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGCGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGACGCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTCACCGGCAAATCTATGAACGAATTATGAATAAAATCTTCAC ]
[+] EMBL AU172309 [ TTGGCCTTTACATAAGCCAGAAGCTCGTGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGA GCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCTTCACTTGTGTTGTCAAAAAAAAA]
consensusID : consensus_13218#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1031 fasta sequence
[AAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTCTCGAAATTTGTTGGAACCTTCTGACTTGACTGAGGAGCAGAGGAAACTTCTAGCATCAAATGTCCTCTGTCAAGAACAGCTGAAAAAGATTTTACATGACACTGATCTAGAAAGCATTGAACAGTGCTACACGGAGATGAGCACCGTAGATTTCAACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCAGAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCACCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCATGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGGCGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGGCCTTGGCCTTTACATAAGCCAGAAGCTCATGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGAGCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCTTCACTTGTGTTGTCATGAATAAAATCTTCAC]
[+] EMBL AK060467 [AAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTCTCGAAATTTGTTGGAACCTTCTGACTTGACTGAGGAGCAGAGGAAACTTCTAGCATCAAATGTCCTCTGTCAAGAACAGCTGAAAAAGATTTTACATGACACTGATCTAGAAAGCATTGAACAGTGCTACACGGAGATGAGCACCGTAGATTTCAACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCAGAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCACCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCATGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGGCGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGGCCTTGGCCTTTACATAAGCCAGAAGCTCATGAAGACGATGAGCGGCACGGTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGAGCTAGTGAGCGAGCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCTTCACTTGTGTTGTCATGAATAAAATCTTCAC]
consensusID : consensus_13218#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 749 fasta sequence
[TCCAGGTTTTTGTTCATGAAGAACAAAGTGCGGATGATATGCGATTGCTCCGCAACGCCATGTGAAGATCATCCAAGATGACAGCCTAACACAACCTATAAGCATATGCGGATCTACTCTCAGGGCACCCCATGGTTGCCATGCACAGTACATGGCAAGCATGGGCTCCGGTGCATCACTTGTGATGTCGGTCACTATAAATGAGGATGAGGATGATGATGGAGACACTGGGAGTGACCAGCAGCCGAAAGGGAGGAAGCTGTGGGGGTTGATGGTCTGCCATCACACAAGCCCGAGGTTTGTCCCTTTCCCGCTTAGGTATGCTTGCGAGTTTCTCTTGCAAGTATTTGGGATACAGATCAACAAGGAGGTGGAACTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCCGCACGCAGACTCTTCTCTGTGATATGCTCCTTCGAGATGCTCCTGTTGGGATATTTACCCAATCACCTAACGTAATGGATCTAGTGAAATGTGATGGTGCAGCATTGTATTACCAAAACCAGCTTTGGGTGCTAGGATCAACGCCCTCTGAAGCAGAGATAAAAAACATTGTTGCATGGTACTCCTGGATTGAGTACCGACAGCTTAGTTGAAGCAGGTTATCCTGGCGCTGCTGCACTTGGTGATGTTGTGTGTGGCATGGCAGCTATAAAGATCTCTTCAAAAGATTTCATCTTCTGGTTCCGATCCCACACGGCAAAAGAGATTATATGGGGAGGA]
[+] EMBL CB668935 [TCCAGGTTTTTGTTCATGAAGAACAAAGTGCGGATGATATGCGATTGCTCCGCAACGCCATGTGAAGATCATCCAAGATGACAGCCTAACACAACCTATAAGCATATGCGGATCTACTCTCAGGGCACCCCATGGTTGCCATGCACAGTACATGGCAAGCATGGGCTCCGGTGCATCACTTGTGATGTCGGTCACTATAAATGAGGATGAGGATGATGATGGAGACACTGGGAGTGACCAGCAGCCGAAAGGGAGGAAGCTGTGGGGGTTGATGGTCTGCCATCACACAAGCCCGAGGTTTGTCCCTTTCCCGCTTAGGTATGCTTGCGAGTTTCTCTTGCAAGTATTTGGGATACAGATCAACAAGGAGGTGGAACTGGCTGCTCAGGCAAAGGAGAGGCACATCCTCCGCACGCAGACTCTTCTCTGTGATATGCTCCTTCGAGATGCTCCTGTTGGGATATTTACCCAATCACCTAACGTAATGGATCTAGTGAAATGTGATGGTGCAGCATTGTATTACCAAAACCAGCTTTGGGTGCTAGGATCAACGCCCTCTGAAGCAGAGATAAAAAACATTGTTGCATGGTACTCCTGGATTGAGTACCGACAGCTTAGTTGAAGCAGGTTATCCTGGCGCTGCTGCACTTGGTGATGTTGTGTGTGGCATGGCAGCTATAAAGATCTCTTCAAAAGATTTCATCTTCTGGTTCCGATCCCACACGGCAAAAGAGATTATATGGGGAGGA]
consensusID : consensus_13218#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 705 fasta sequence
[TTTCTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATTAATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCTTTTTGGTTTTTTCAACACCGATGGCAAGTACATAGAGTCACTGATGTCAGCAACCAAGAGGACAGATGTTGAGGGTAAGATCACTGGCGCCCTTTGCTTTCTTCATGTGGCCAGCCCAGAGCTTCAACATGCTCTGCAGGTGCAGAAGATGTTTGAACAAGCTGCTATGAACAGCTTTAAGGAACTGACATACATACGTCAAGAATTAAGGAACCCACAATGGAGGTTGGAGTTAGAAGCCATGTTGCAAAAGGGTGTCAAATTTGAGATTGAGGCGTTATCTGCATGTTCCATTTCCTTTTTATCAGAAGAGTACATTCCCAAGAAGATCAAACAAGGAAGACATATATAAGATTGGTTGTACCTGTATCTATCCAGAAATTTTCATGTGGCAAAAGTCTTATTTTGTTTTTGTCATGCTAACTGTAGTCACATGTATGGCACTTTGGTAGTTTATCCCCCAGCAAGTATTTTGTAGCAATTGTTTATATATGAACGGTGATTTGGTGCTGTCTCAAGAACTGAAAGCCACAAATTTACAGCAT]
[-] EMBL CB668936 [TTTCTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATTAATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCTTTTTGGTTTTTTCAACACCGATGGCAAGTACATAGAGTCACTGATGTCAGCAACCAAGAGGACAGATGTTGAGGGTAAGATCACTGGCGCCCTTTGCTTTCTTCATGTGGCCAGCCCAGAGCTTCAACATGCTCTGCAGGTGCAGAAGATGTTTGAACAAGCTGCTATGAACAGCTTTAAGGAACTGACATACATACGTCAAGAATTAAGGAACCCACAATGGAGGTTGGAGTTAGAAGCCATGTTGCAAAAGGGTGTCAAATTTGAGATTGAGGCGTTATCTGCATGTTCCATTTCCTTTTTATCAGAAGAGTACATTCCCAAGAAGATCAAACAAGGAAGACATATATAAGATTGGTTGTACCTGTATCTATCCAGAAATTTTCATGTGGCAAAAGTCTTATTTTGTTTTTGTCATGCTAACTGTAGTCACATGTATGGCACTTTGGTAGTTTATCCCCCAGCAAGTATTTTGTAGCAATTGTTTATATATGAACGGTGATTTGGTGCTGTCTCAAGAACTGAAAGCCACAAATTTACAGCAT]
consensusID : consensus_13218#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 692 fasta sequence
[TTTTTTTTTTTTAGGAAAATTTCAGTTGTTGTAAATTTGTGGTTTTCAGTTCTTGAGACAGCACCAAATCACCGTCATATATAAACAATTGCTACAAAATACTTGCTGGGGGTTAAACTACCAGAGTGCCATACATGTGACTACAGTTAGCATGACAAAAACAAAATAAGACTTTTGCCACATGAAAATTTCTGGATAGATACAGGTACAACCAATCTTATATATGTCTTCCTTGTTTGATCTTCTTGGGAATGTACTCTTCTGATAAAAAGGAAATGGAACATGCAGATAACGCCTCAATCTCAAATTTGACACCCTTTTGCAACATGGCTTCTAACTCCAACCTCCATTGTGGGGCTTCCCTGTGCAAGTAACACCTTGAGAGAATTCCTTCAGCTTTCCTTCTGTCTTCAGACGACAAGTGAAGTAGGCAGCAGTCTGGAAGGCGATAATCCTCAAAATCAGATGTGAAGACCCCAAGCCACCGAATATCAGGCACACGCAGGAAATTTGCATCGTATGCCAATTGCAGTGAACCAAATTTGTAGGTAGCCAGAATGTCGAAACCATAAGGGTCTGCATCCACCAAACAGTANACTGGCAAATGCAGCTGTTCAACAAGGTTGCGCAAGAATCTTCTTGTTGGAATATCTGGGTAGCCTCTTCCTGTAATCACAATGCAGCGATTCCTT]
[+] EMBL CA762234 [TTTTTTTTTTTTAGGAAAATTTCAGTTGTTGTAAATTTGTGGTTTTCAGTTCTTGAGACAGCACCAAATCACCGTCATATATAAACAATTGCTACAAAATACTTGCTGGGGGTTAAACTACCAGAGTGCCATACATGTGACTACAGTTAGCATGACAAAAACAAAATAAGACTTTTGCCACATGAAAATTTCTGGATAGATACAGGTACAACCAATCTTATATATGTCTTCCTTGTTTGATCTTCTTGGGAATGTACTCTTCTGATAAAAAGGAAATGGAACATGCAGATAACGCCTCAATCTCAAATTTGACACCCTTTTGCAACATGGCTTCTAACTCCAACCTCCATTGTGGGGCTTCCCTGTGCAAGTAACACCTTGAGAGAATTCCTTCAGCTTTCCTTCTGTCTTCAGACGACAAGTGAAGTAGGCAGCAGTCTGGAAGGCGATAATCCTCAAAATCAGATGTGAAGACCCCAAGCCACCGAATATCAGGCACACGCAGGAAATTTGCATCGTATGCCAATTGCAGTGAACCAAATTTGTAGGTAGCCAGAATGTCGAAACCATAAGGGTCTGCATCCACCAAACAGTANACTGGCAAATGCAGCTGTTCAACAAGGTTGCGCAAGAATCTTCTTGTTGGAATATCTGGGTAGCCTCTTCCTGTAATCACAATGCAGCGATTCCTT]
consensusID : consensus_13218#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGAAAAATTTCAGTTGGGGGAAATTTGGGGTTTTCAGTTCTTGAGACAGCCCCAAATCACCGTCATATATAAACAATTGCTACAAAATACTTGCTGGGGGTTAAACTACCAAAGGGCCATACATGGGACTACCGTTAGCAGGACAAAAACAAAATAAAACTTTTGCCACATGAAAATTTCTGGATAGATACGGGTACAACCAACCTTATATATGCCTTCCTTGGTGGACCTTCTTGGGAAGGGACTCTTCTGATAAAAAGGAAAGGGAACATGCAAATAACGTCTCAATCTCAAATTTGACACCCTTTTGCAACATGGCTTCTAACTCCAACCTCCATTGTGGGGCTTCCCTGCGCAAGAAACACCTTGAGAGATTCCTTCAGCTTTCCTTCTGNCTTCAAANCACCAGGGAAATAGGCCGCATCCTGGAAGGGCGATATCCTCAAAATCAGATGTGAAGACCCCCGGCCCACCGATATTAGGCACACCCAGGAATTGGCTCCGAAGCCCTTGCAGGAACCCAATTTGAAGGTGCCCAAAGGCCAAACCCTAAGGGGCTGCCCCCACCAACCGACTGCAGGTNNNNNNTTTTCACAGGGAACGCAAGAATCTGCCCCCCCTCAAAAAAAAAAGAAGCCCCACAC]
[+] EMBL CA759882 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGAAAAATTTCAGTTGGGGGAAATTTGGGGTTTTCAGTTCTTGAGACAGCCCCAAATCACCGTCATATATAAACAATTGCTACAAAATACTTGCTGGGGGTTAAACTACCAAAGGGCCATACATGGGACTACCGTTAGCAGGACAAAAACAAAATAAAACTTTTGCCACATGAAAATTTCTGGATAGATACGGGTACAACCAACCTTATATATGCCTTCCTTGGTGGACCTTCTTGGGAAGGGACTCTTCTGATAAAAAGGAAAGGGAACATGCAAATAACGTCTCAATCTCAAATTTGACACCCTTTTGCAACATGGCTTCTAACTCCAACCTCCATTGTGGGGCTTCCCTGCGCAAGAAACACCTTGAGAGATTCCTTCAGCTTTCCTTCTGNCTTCAAANCACCAGGGAAATAGGCCGCATCCTGGAAGGGCGATATCCTCAAAATCAGATGTGAAGACCCCCGGCCCACCGATATTAGGCACACCCAGGAATTGGCTCCGAAGCCCTTGCAGGAACCCAATTTGAAGGTGCCCAAAGGCCAAACCCTAAGGGGCTGCCCCCACCAACCGACTGCAGGTNNNNNNTTTTCACAGGGAACGCAAGAATCTGCCCCCCCTCAAAAAAAAAAGAAGCCCCACAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13218#0 CCGAGATGCTCGACCTCACGCCGCACGCCGTGCCCACCATTGACCAGCGCGAGGCGCTCG 60
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCGTCGGCACCGACGTGCGCACGCTCTTCCGCTCGCACAGCTTCGTCGCGCTGCAGAAGG 120
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCGCCACCTTCGGGGACGTCAACCTGCTCAACCCCATCCTCGTCCACGCCAGGACCTCCG 180
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GGAAGCCCTTCTACGCCATCATGCACCGCATCGACGTCGGCCTCGTCATCGACCTCGAGC 240
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CGGTCAACCCCGTCGACCTGCCCGTCACCGCCACAGGCGCGATCAAGTCGTACAAGCTCG 300
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CTGCCAGGGCCATCGCCAGGCTGCAGTCCCTGCCCAGTGGGAACCTCTCCCTGCTGTGCG 360
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 ACGTGCTGGTCCGCGAGGTGAGCGAGCTCACTGGCTATGACAGGGTGATGGCGTACAAGT 420
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TCCATGAGGATGAGCATGGTGAGGTGATTGCTGAGTGCAAGAGATCTGATTTGGAGCCGT 480
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 -----------------------------------------------------------A 1
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 ATCTTGGCCTGCACTACCCAGCCACTGACATTCCTCAGGCATCCAGGTTTTTGTTCATGA 540
consensus_13218#2 -----------------------------------------TCCAGGTTTTTGTTCATGA 19
consensus_13218#1 AGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCACCCACCATGAGTATGGCTGTAG 61
consensus_13218#3 -----------------------------------------------TTTCTGGTATAAA 13
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 AGAACAAAGTGCGGATGATATGCGATTGCTCCGCAACGCC-TGTGAAGATCATCCAAGAT 599
consensus_13218#2 AGAACAAAGTGCGGATGATATGCGATTGCTCCGCAACGCCATGTGAAGATCATCCAAGAT 79
consensus_13218#1 GGTGAAAGACCATGGTACTCTGACCAAACTTCTCGAAATT-TGTTGGAACCTTCTGACTT 120
consensus_13218#3 GAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTT-TTCACCCACCATG-AGTAT 71
consensus_13218#4 ------------------------------------TTTTTTTTTTTTA----GGAAAAT 20
consensus_13218#5 ----------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGAAAAAT 50
* * *
consensus_13218#0 GACAGCCTAACACA---ACCTATAAGCATATGCGGATCTACTCTCAGGGCACCCCATGGT 656
consensus_13218#2 GACAGCCTAACACA---ACCTATAAGCATATGCGGATCTACTCTCAGGGCACCCCATGGT 136
consensus_13218#1 GACTGAGGAGCAGAGGAAACTTCTAGCATCAAATGTCCTCTGTCAAGAACAGCTGAAAAA 180
consensus_13218#3 GGCTGTAGGGTGAA----------AGACCATGGTACTCTG-ACCAAACTTAGCATATTAA 120
consensus_13218#4 TTCAGTTGTTGTAA-----------ATTTGTGGTTTTCAGTTCTTGAGACAGCACCAAAT 69
consensus_13218#5 TTCAGTTGGGGGAA-----------ATTTGGGGTTTTCAGTTCTTGAGACAGCCCCAAAT 99
* * * * * *
consensus_13218#0 TGCCATGCACAGTACATGGCAAGCATGGGCTCCGTTGCATCACTTGTGATGTCGGTCACT 716
consensus_13218#2 TGCCATGCACAGTACATGGCAAGCATGGGCTCCGGTGCATCACTTGTGATGTCGGTCACT 196
consensus_13218#1 GATTTTACATGACACTGATCTAGAAAGCATTGAACAGTGCTAC--ACGGAGATGAGCACC 238
consensus_13218#3 TG---AACACAGTG-ATATCTGGTCAAGATCCTGAGAAGCTTCTTTTTGGTTTTTTCAAC 176
consensus_13218#4 CAC----CGTCATATATA---AACAATTGCTACAAAATACTTGCTGGGGGTTAAACTACC 122
consensus_13218#5 CAC----CGTCATATATA---AACAATTGCTACAAAATACTTGCTGGGGGTTAAACTACC 152
* *
consensus_13218#0 ATAAATGAGGATGAGGATGATGA--TG--GAGACACTGGGAGTGACCAGC-A-GCCGAAA 770
consensus_13218#2 ATAAATGAGGATGAGGATGATGA--TG--GAGACACTGGGAGTGACCAGC-A-GCCGAAA 250
consensus_13218#1 GTAGATTTCAACCTGGAGGAAGCCCTG--AATACAGTCCTAATGCAAGCC-ATGCCCCAG 295
consensus_13218#3 ACCGATGGCAAGTACATAGAGTCACTG--ATGTCAGCAACCAAGAGGACAGATGTTGAGG 234
consensus_13218#4 AGAGTGCCATACATGTGACTACAGTTAGCATGACAAAAACAAAATAAGACTTTTGCCACA 182
consensus_13218#5 AAAGGGCCATACATGGGACTACCGTTAGCAGGACAAAAACAAAATAAAACTTTTGCCACA 212
* * **
consensus_13218#0 GGGAGGAAGCTGTGGGGGTTGATGGTCTGCCATCA-----CACAAGCCCGAGGTTTGTCC 825
consensus_13218#2 GGGAGGAAGCTGTGGGGGTTGATGGTCTGCCATCA-----CACAAGCCCGAGGTTTGTCC 305
consensus_13218#1 AGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCAC 355
consensus_13218#3 GTAAGATCACTGGCGCCCTTTGCTTTCTTCATGTGGCCAGCCCAGAGCTTCAACATG--- 291
consensus_13218#4 TGAAAATTTCTGGATAGATACAGGTACAACCAATC--TTATATATGTCTTCCTTGTTTGA 240
consensus_13218#5 TGAAAATTTCTGGATAGATACGGGTACAACCAACC--TTATATATGCCTTCCTTGGTGGA 270
* * * *
consensus_13218#0 CTTTCCCGC--TTAGGTATGCTTG--CGAGTTTCTCTTGCAAGTATTT-----GGGATAC 876
consensus_13218#2 CTTTCCCGC--TTAGGTATGCTTG--CGAGTTTCTCTTGCAAGTATTT-----GGGATAC 356
consensus_13218#1 CTCTGCGGGGACAATTTAAGGCTT--CAACAAGTCCTAGCAGAC-TTC-----CTGGCAT 407
consensus_13218#3 CTCTGCAGGTGCAGAAGATGTTTGAACAAGCTGCTATGAACAGCTTTAAGGAACTGACAT 351
consensus_13218#4 TCTTCTTGGGAATGTACTCTTCTGATAAAAAGGAAATGGAACATGCAG-----ATAACGC 295
consensus_13218#5 CCTTCTTGGGAAGGGACTCTTCTGATAAAAAGGAAAGGGAACATGCAA-----ATAACGT 325
* * * *
consensus_13218#0 AGATCAACAAGGAGGTGGAACTGGCTGCTCAGGCAAAGGAGAGGCA---CATCCTCCGCA 933
consensus_13218#2 AGATCAACAAGGAGGTGGAACTGGCTGCTCAGGCAAAGGAGAGGCA---CATCCTCCGCA 413
consensus_13218#1 GCATGCTTCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGA 467
consensus_13218#3 ACATACGTCAAGAATTAAGGAACCCACAATGGAGGTTGGAGTTAGAAGCCATGTTGCAAA 411
consensus_13218#4 CTCAATCTCAAATTT----GACACCCTTTTGCAACATGGCTTCTAACTCCAACCTCCATT 351
consensus_13218#5 CTCAATCTCAAATTT----GACACCCTTTTGCAACATGGCTTCTAACTCCAACCTCCATT 381
* * * * **
consensus_13218#0 CGCAGACTCTTCTCTGTGATATGCTCCTTCGAGATGCTCCTGTTGGGATATTTACCCAAT 993
consensus_13218#2 CGCAGACTCTTCTCTGTGATATGCTCCTTCGAGATGCTCCTGTTGGGATATTTACCCAAT 473
consensus_13218#1 TGGAAAATATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAG 527
consensus_13218#3 ---AGGGTGTCAAATTTGAGATTGAGGCGTTATCTGCATGTTCCATTTCCTTTTTATCAG 468
consensus_13218#4 GTGGGGCTTCCCTGTGCAAGTAACACCTTGAGAGAATTCCTTCAGCTTTCCTTCTGTCTT 411
consensus_13218#5 GTGGGGCTTCCCTGCGCAAGAAACACCTTGAGAGA-TTCCTTCAGCTTTCCTTCTGNCTT 440
* *
consensus_13218#0 CACCTAACGT-----AATGGATCTAGT-----GAAATGTGATGGTGCAGCATTG-TATTA 1042
consensus_13218#2 CACCTAACGT-----AATGGATCTAGT-----GAAATGTGATGGTGCAGCATTG-TATTA 522
consensus_13218#1 CTCCGGGCGTTCC--AGAGGCTCTGATACA-AGAGATGTTCCGCCACAGCCCAGGTGCAT 584
consensus_13218#3 AAGAGTACATTCCCAAGAAGATCAAACA----AGGAAGACATATATAAGATTGGTTGTAC 524
consensus_13218#4 CAGACGACAAGTGAAGTAGGCAGCAGTCTGGAAGGCGATAATCCTCAAAATCAGATGTGA 471
consensus_13218#5 CAAANCACCAGGGAAATAGGCCGCATCCTGGAAGGGCGATATCCTCAAAATCAGATGTGA 500
* * * * *
consensus_13218#0 CCAAAACCAGCT-TTGGGTGCTA---GGATCAACGCCCTCTGAAGCAGAGATAAAAAACA 1098
consensus_13218#2 CCAAAACCAGCT-TTGGGTGCTA---GGATCAACGCCCTCTGAAGCAGAGATAAAAAACA 578
consensus_13218#1 CTCGAGAGGGCC-TTGGCCTTTACATAAGCCAGAAGCTCATGAAGACGATGAGCGGCACG 643
consensus_13218#3 CTGTATCTATCC-AGAAATTTTCATGTGGCAAAAGTCTTATTTTGTTTTTGTCATGCTAA 583
consensus_13218#4 AGACCCCAAGCCACCGAATATCAGGCACACGCAGGAAATTTGCATCGTATGCCAATTGCA 531
consensus_13218#5 AGACCCCCGGCCCACCGATATTAGGCACACCCAGGAA-TTGGCTCCGAAGCCC--TTGCA 557
*
consensus_13218#0 TTGTTGCTTGGTTGCAGGAGTACCATGACGGTTCTACTGGATTGAGTACCGACAGCTTAG 1158
consensus_13218#2 TTGTTGC--------------------ATGGTACTCCTGGATTGAGTACCGACAGCTTAG 618
consensus_13218#1 GTTCAGTACCTCCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTA--GAGTTCCCGG 701
consensus_13218#3 CTGTAGTCACAT--------GTATGGCACTTTGGTAGTTTATCCCCCAGCAAGTATTTTG 635
consensus_13218#4 GTGAACCAAATTT-------GTAGGTAGCCAGAATGTCGAAACCATAAGGGTCTGCATCC 584
consensus_13218#5 G-GAACCCAATTT-------GAAGGTGCCCAAA--GGCCAAACCCTAAGGGGCTGCCCCC 607
*
consensus_13218#0 TTGAAGCAGGTTATC--CTGGCGCTGCTGCACTTGGTGATGTTGTGTGTGGCATGGCAGC 1216
consensus_13218#2 TTGAAGCAGGTTATC--CTGGCGCTGCTGCACTTGGTGATGTTGTGTGTGGCATGGCAGC 676
consensus_13218#1 TCGCC-CAGCTCAGCACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGC 760
consensus_13218#3 TAGCAATTGTTTATATATGAACGGTG----ATTTGGTGCTGTC--TCAAGAACTGAAAGC 689
consensus_13218#4 ACCAAACAGTANACTGGCAAATGCAGCT--GTTCAACAAGGTTGCGCAAGAATCT--TCT 640
consensus_13218#5 ACCAACC----GACTG-CAGGTNNNNNN--TTTTCACAGGGA-ACGCAAGAATCTGCCCC 659
* * * *
consensus_13218#0 TATA---AAGATCTCTTCAAAAGATTTCATCTTCTGGTT-CCGATCCCACA--CGGCAAA 1270
consensus_13218#2 TATA---AAGATCTCTTCAAAAGATTTCATCTTCTGGTT-CCGATCCCACA--CGGCAAA 730
consensus_13218#1 TATGGCCAAAATTCTTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGA 820
consensus_13218#3 CACA----AATTTACAGCAT---------------------------------------- 705
consensus_13218#4 TGTT---GGAATATCTGGGTAGCCTCTTCCTGTAATCACAATGCAGCGATTCCTT----- 692
consensus_13218#5 CCCT---CAAAAAAAAAAGAAGCCCCACAC------------------------------ 686
consensus_13218#0 GGAGATTAAATGGGGAGGAGCTAAGCATGAACCAATTGATGCAGATGACAATGGTAGGAA 1330
consensus_13218#2 AGAGATTATATGGGGAGGA----------------------------------------- 749
consensus_13218#1 TCAGGCAGTCTGAGGAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAG 880
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GATGCATCCACGATCTTCATTCAAAGCCTTCTTGGAGGTAGTTAAATGGAGGAGTGTTCC 1390
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 TGAAGGTAGTGGTTGGATAGATGTATTTGTCACGTTGATGTCTGGAGAGCTAGTGAGCGA 940
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TTGGGAGGATGTTGAAATGGATGCTATCCATTCTCTGCAGCTAATATTACGTGGCTCCTT 1450
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 GCTACTAGGTGTTAGTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCT 1000
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GCAAGATGAAGATGCCAACAAGAACAACAATGCAAAGTCCATTGTTACAGCTCCATCTGA 1510
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 TCACTTGTGTTGTCATGAATAAAATCTTCAC----------------------------- 1031
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TGATATGAAGAAGATTCAGGGGCTCCTTGAACTGAGAACCGTTACAAACGAGATGGTGCG 1570
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCTAATTGAGACAGCAACTGCGCCTATCTTGGCTGTTGACATCACTGGGAGCATAAACGG 1630
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 ATGGAATAATAAGGCTGCAGAACTCACTGGATTACCTGTCATGGAAGCCATAGGGAAGCC 1690
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TCTGGTCGATCTCGTCATCGATGATTCTGTTGAAGTGGTTAAGCAAATTTTAAATTCAGC 1750
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TTTACAAGGAATAGAAGAGCAAAATCTGCAAATTAAGCTTAAAACATTTAATCACCAGGA 1810
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 AAATAATGGACCTGTAATTTTGATGGTTAACGCCTGCTGCAGTCGTGACCTTTCAGAGAA 1870
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 AGTTGTGGGGGTTTGCTTTGTAGCACAAGATATGACAGGGCAGAACATTATCATGGATAA 1930
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GTACACTCGGATACAAGGGGACTATGTTGCTATAGTAAAGAACCCTTCGGAGCTCATCCC 1990
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCCTATATTTATGATCAATGATCTTGGTTCCTGCTTAGAGTGGAATGAAGCTATGCAAAA 2050
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 AATTACTGGTATAAAGAGGGAAGATGCAGTAGATAAATTGCTAATCGGGGAAGTTTTCAC 2110
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCACCATGAGTATGGCTGTAGGGTGAAAGACCATGGTACTCTGACCAAACTTAGCATATT 2170
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 AATGAACACAGTGATATCTGGTCAAGATCCTGAGAAGCTTCTTTTTGGTTTCTTCAACAC 2230
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CGATGGCAAGTACATAGAGTCACTGATGACAGCAACCAAGAGGACAGATGCTGAGGGTAA 2290
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GATCACTGGCGCCCTTTGCTTTCTTCATGTGGCCAGCCCAGAGCTTCAACATGCTCTGCA 2350
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GGTGCAGAAGATGTCTGAACAAGCTGCTATGAACAGCTTTAAGGAACTGACATACATACG 2410
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TCAAGAATTAAGGAACCCACTCAATGGCATGCAATTTACTCGAAATTTGTTGGAACCTTC 2470
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TGACTTGACTGAGGAGCAGAGGAAACTTCTAGCATCAAATGTCCTCTGTCAAGAACAGCT 2530
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GAAAAAGATTTTACATGACACTGATCTAGAAAGCATTGAACAGTGCTACACGGAGATGAG 2590
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CACCGTAGATTTCAACCTGGAGGAAGCCCTGAATACAGTCCTAATGCAAGCCATGCCCCA 2650
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GAGCAAGGAGAAACAAATTTCCATTGACCGTGATTGGCCTGCAGAAGTATCATGTATGCA 2710
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCTCTGCGGGGACAATTTAAGGCTTCAACAAGTCCTAGCAGACTTCCTGGCATGCATGCT 2770
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TCAATTTACACAGCCAGCTGAAGGGCCTATTGTGCTCCAAGTCATCCCCAGGATGGAAAA 2830
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TATTGGATCTGGAATGCAGATTGCTCATCTAGAGTTCAGGCTTGTCCATCCAGCTCCGGG 2890
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CGTTCCAGAGGCTCTGATACAAGAGATGTTCCGCCACAGCCCAGGTGCATCTCGAGAGGG 2950
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCTTGGCCTTTACATAAGCCAGAAGCTCGTGAAGACGATGAGCGGCACGGTTCAGTACCT 3010
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CCGGGAATCAGAGAGCTCGTCGTTCATCGTCCTGGTAGAGTTCCCGGTCGCCCAGCTCAG 3070
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 CACCAAGAGGTGCAAGGCTTCCACGAGTAAATTCTGAACTTAGGGCTATGGCCAAAATTC 3130
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 TTGTGGGTGCTGTATTGTTGTTGTTGCTGCTGCTGCTATTAGCAGATCAGGCAGTCTGAG 3190
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GAGTACGTTAGCTGAAGATGTATCAGATGTGTGTAGCTTGTGAAAGTGAAGGTAGTGGTT 3250
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GGATAGATGTATTTGTCACGTTGATGTCTGGAGAGCTAGTGAGCGAGCTACTAGGTGTTA 3310
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 GTGTAATTTAACCGGCAAATGTATGAACGAATTATGAATAAAATCTTCACTTGTGTTGTC 3370
consensus_13218#2 ------------------------------------------------------------
consensus_13218#1 ------------------------------------------------------------
consensus_13218#3 ------------------------------------------------------------
consensus_13218#4 ------------------------------------------------------------
consensus_13218#5 ------------------------------------------------------------
consensus_13218#0 AAAAAAAAA 3379
consensus_13218#2 ---------
consensus_13218#1 ---------
consensus_13218#3 ---------
consensus_13218#4 ---------
consensus_13218#5 ---------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||