cluster # 1322

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1322 cluster # 1322 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1322#0 length = 604 sequences # 2

consensusID : consensus_1322#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 604
fasta sequence

                              [GTCAACATTTCAAGAGCCCCCATAGTGACCCTACTATCCTCAACCAAGCTGGCCAGGCCCAAGGTTATTGACTCCCGTGTCAGGAGAAAGTTCAAGGGATCACCTTGATGCCCCACATTGGTTACGGCTCAGACAAGAAGACCAGCACTACCTCCCCAACAAGTTCAAGAAGTTTGTGGTGCACAATGTCTCTGAGCTGGAGTTGCTCATGATGCNC-ACAGGACCTACTGTGCCGAGATTGCCCCCAACGTCTCTACGAAGAAGCGCAAGGAGATCGTTGAGCGTGCTGC-CAGCTCGACATCGTGGTCACCCACAAGCTTGCAAGGCTCCGTAGCCAGGAGGACGAGTAGGCTGTTTTATCAGTATAATGTTTTGGTCTGGTTTGATTGTAGGAAACTGTCGC-CCTCCCAGTATTCTCCTTTCCATCGATGTGGTACTGTGAAAGATAACTATTATGTCCACCTTTTTGCTACCA-CAGCTACTCTAATGT-GCC-AATTACTATCGCATCATTAGCCTACATGTCCTGCATTTTGCGTTTTTGCTCTGGATGAATGCTGTATTGTATCTGTTGAATTTATTGTGTTGAGGTATCGTCCAAAAAAAA]

[+] EMBL BI806340             [GTCAACATTTCAAGAGCCCCCATAGTGACCCTACTATCCTCAACCAAGCTGGCCAGGCCCAAGGTTATTGACTCCCGTGTCAGGAGAAAGTTCAAGGGATCACCTTGATGCCCCACATTGGTTACGGCTCAGACAAGAAGACCAGCACTACCTCCCCAACAAGTTCAAGAAGTTTGTGGTGCACAATGTCTCTGAGCTGGAGTTGCTCATGATGCNC ACAGGACCTACTGTGCCGAGATTGCCCCCAACGTCTCTACGAAGAAGCGCAAGGAGATCGTTGAGCGTGCTGC CAGCTCGACATCGTGGTCACCCACAAGCTTGCAAGGCTCCGTAGCCAGGAGGACGAGTAGGCTGTTTTATCAGTATAATGTTTTGGTCTGGTTTGATTGTAGGAAACTGTCGC CCTCCCAGTATTCTCCTTTCCATCGATGTGGTACTGTGAAAGATAACTATTATGTCCACCTTTTTGCTACCA CAGCTACTCTAATGT GCC AATTACTATCGCATC                                                                                                ]
[-] EMBL CF329684             [                                                                                                                                                                   TTCAAGAAGTTTGTGGTGCACAATGTCTCTGAGCTGGAGTTGCTCATGATGCACAACAGGACCTACTGTGCCGAGATTGCCCACAACGTCTCTACGAAGAAGCGCAAGGAGATCGTTGAGCGTGCTGCGCAGCTCGACATCGTGGTCACCAACAAGCTTGCAAGGCTCCGTAGCCAGGAGGACGAGTAGGCTGTTTTATCAGTATAATGTTTTGGTCTGGTTTGATTGTAGGAAACTGTCGCGCCTCCAAGTATTCTCCTTTCAATCGATGTGGTACTGTGAAAGATAACTATTATGTCAACCTTTTTGCTACCAGCAGCTACTTTAATGTGGCCAAATTACTATCGCATCATTAGCCTACATGTCCTGCATTTTGCGTTTTTGCTCTGGATGAATGCTGTATTGTATCTGTTGAATTTATTGTGTTGAGGTATCGTCCAAAAAAAA]




>consensus_1322#0
GTCAACATTTCAAGAGCCCCCATAGTGACCCTACTATCCTCAACCAAGCTGGCCAGGCCC
AAGGTTATTGACTCCCGTGTCAGGAGAAAGTTCAAGGGATCACCTTGATGCCCCACATTG
GTTACGGCTCAGACAAGAAGACCAGCACTACCTCCCCAACAAGTTCAAGAAGTTTGTGGT
GCACAATGTCTCTGAGCTGGAGTTGCTCATGATGCNCACAGGACCTACTGTGCCGAGATT
GCCCCCAACGTCTCTACGAAGAAGCGCAAGGAGATCGTTGAGCGTGCTGCCAGCTCGACA
TCGTGGTCACCCACAAGCTTGCAAGGCTCCGTAGCCAGGAGGACGAGTAGGCTGTTTTAT
CAGTATAATGTTTTGGTCTGGTTTGATTGTAGGAAACTGTCGCCCTCCCAGTATTCTCCT
TTCCATCGATGTGGTACTGTGAAAGATAACTATTATGTCCACCTTTTTGCTACCACAGCT
ACTCTAATGTGCCAATTACTATCGCATCATTAGCCTACATGTCCTGCATTTTGCGTTTTT
GCTCTGGATGAATGCTGTATTGTATCTGTTGAATTTATTGTGTTGAGGTATCGTCCAAAA
AAAA

clustalw multiple alignements is not computed in this case