cluster # 1323

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Oryza sativa
cluster # 1323 cluster # 1323 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1323#0 length = 544 sequences # 2

consensusID : consensus_1323#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 544
fasta sequence

                              [CGTGCCGAATTCGGCACGAGCAGAAAGCTAGAGAGCTAGCAATGGCGCCCACCGTGATGGCCTCGTCGGCCACCTCCGTTGCTCCCTTCCAGGGGCTCAAATCCACCGCCGGGCTCCCCGTCAGCCGCCGCTCCAACAGCGCCGGCCTCGGCAGCGTCAGCAACGGTGGAAGGATCA-GCTGTATGCAGGTGTGGCCGATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCACCGCTCACGGTCGAGGACCTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGTGCCTTGCCTCGAGTTTAGTAAGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGTACTATGATGGCAGGTACTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCACCCATGTGCTCAAGGAGCTCGAGGAGGCCAAGAANGCATATNCAAGATGCATTTGTTCGCATCATCGGCTTCGACAACGTCAAGGCANGTGCAAGTTGATTAACTTCATCGNCTACAANCCCCC]

[+] EMBL BE230520             [CGTGCCGAATTCGGCACGAGCAGAAAGCTAGAGAGCTAGCAATGGCGCCCACCGTGATGGCCTCGTCGGCCACCTCCGTTGCTCCCTTCCAGGGGCTCAAATCCACCGCCGGGCTCCCCGTCAGCCGCCGCTCCAACAGCGCCGGCCTCGGCAGCGTCAGCAACGGTGGAAGGATCA GCTGTATGCAGGTGTGGCCGATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCACCGCTCACGGTCGAGGACCTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGTGCCTTGCCTCGAGTTTAGTAAGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGTACTATGATGGCAGGTACTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCACCCATGTGCTCAAGGAGCTCGAGGAGGCCAAGAANGCATATNCAAGATGCATTTGTTCGCATCATCGGCTTCGACAACGTCAAGGCANGTGCAAGTTGATTAACTTCATCGNCTACAANCCCCC]
[+] EMBL BE230187             [CGTGCCGAATTCGGCACGAGCAGAAAGCTAGAGAGCTAGCAATGGCGCCCACCGTGATGGCCTCGTCGGCCACCTCCGTTGCTCCCTTCCAGGGGCTCAAATCCACCGCCGGGCTCCCCGTCAGCCGCCGCTCCAACAGCGCCGGCCTTGGCAGCGTCAGCAACGGTGGAAGGATCATGCTGTATGCAGGTGTGGCCGATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCACCGTTCACGGTCGAGGACCTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGTGCCTTGCCTCGAGTTTAGTAAGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGTACTATGATGGCAGGTACTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCACCCAGGTGCTCAAGGAGCTCGAGGAGGCCAACAAGGCATAT CCAGATGCATTTGTTCGCATCATCGGCTTCGACAACGTC AGGCAAGTGC AGTTGATTAgc                    ]




>consensus_1323#0
CGTGCCGAATTCGGCACGAGCAGAAAGCTAGAGAGCTAGCAATGGCGCCCACCGTGATGG
CCTCGTCGGCCACCTCCGTTGCTCCCTTCCAGGGGCTCAAATCCACCGCCGGGCTCCCCG
TCAGCCGCCGCTCCAACAGCGCCGGCCTCGGCAGCGTCAGCAACGGTGGAAGGATCAGCT
GTATGCAGGTGTGGCCGATTGAAGGCATCAAGAAGTTTGAGACCCTGTCGTACCTGCCAC
CGCTCACGGTCGAGGACCTCTTGAAGCAGATCGAGTACCTGCTCCGGTCCAAATGGGTGC
CTTGCCTCGAGTTTAGTAAGGTCGGGTTCGTCTACCGTGAGAACCACAGGTCTCCTGGGT
ACTATGATGGCAGGTACTGGACCATGTGGAAGCTGCCTATGTTCGGATGCACTGATGCCA
CCCATGTGCTCAAGGAGCTCGAGGAGGCCAAGAANGCATATNCAAGATGCATTTGTTCGC
ATCATCGGCTTCGACAACGTCAAGGCANGTGCAAGTTGATTAACTTCATCGNCTACAANC
CCCC

clustalw multiple alignements is not computed in this case