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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13240#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2663 fasta sequence
[GACGTTCTGCTCTCTGAGCTGATATACTTCCGTTCGCTACGATGCTCTGCTGGGCTCTGATGGTTTCCTGAACTGCTCTATGTTGTGTTTGTTTGTGTTTCTTCTCGCGTGCAGTCCAAGGCGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGGTAAAGAATTCAGCACCCCTCTAATTTTATAATTGTGTAGTACAGAATCCATACGGTAACCAAGCGTTCAATTATTTCTTCTGTTCATAAGACCGATCGATTCAGCTCAATCTGGGTTTGATTTGGCTGGATTGTGTTGGTCTTAGTCTATTGTGTGTTGGGGCTATACTCCAGTTTTGGAGCTTGGATCTGTTTAGGGGTTGGGCTCTTGTTATTCTGCTCGTTAGGTGATGCAATTTTGCAGCCTTCCGTTCGTTGAAAGTTGATACAGGGGGCTAGTTGAATGTTACTAAGCTTGTATGAAGAATTGAAGTTAGAGAACTTATGACTAGAAACAGTTCATGAAGAAATTGTTTGAAGCATCCGAGAAACTAGGAGTATTTTATAGCGGTCTTTAGATTTATGAGGTCTATTACCAGTAGTAGGATAGATATGGCCCATTATTATTATTATATAAGAAAAGATGAAAGGTCTAGATTGATTTTACTACCAGTAGAGACCTCTGTAAAGTGAATTTCAATCAACAAAGTAGAACATTCAACTGACTTGCCCATCAGCTTTCAGCTATGGCTTCTGCTGCTGGCTGGCATTCACAATTTAACATATATTTTCTTGGATATGAGTAGGGAATGACTTTGGAAGCATCAATTTAGGCCTTGATTGAAACACTGATGGGACTTGCATACTGCCTTATACTCCTACCTGCACTGTAGACATGTCCAATGTTTGGTGTATTGCAAAAAAGAAATTAGGAATTTAGTTTTTTTCCCCTTTGGCTATTACTAATCTATATAATGGACATAGGGCTGGAAAGCACAGAATTTATAACGTCTAGCCATTCAAATTTGACATTGAGCTCAGTGGAATATGCTCCTCACCGGGTGACACAAACTGTTCTGTTACTCCCTCCAGTCATTTAGTTCTCCCAACGTCAGACACATTAAAGTAGAGAGATTAGTTTCCAACCCAATTGGCCACTTACCATGCTATTATATAGGCTGCATATACTCATAAAAAATTGCTTCAGGCTGTCAAGCTTAGTTGGTTTACATTTACTTTGTAATGTTGACTGTAGGATTATCGGTACCTGTAACGAATCGGTTAACACTGGTATTCAGAATTCAGTATTTGCCCTGGTTCATTACAATGCTTATATGTGTTGTGCACTTGTGCTAGTTTAGGTGTTACATTTCTGATTTTTTTTATCTTATCCAAATAAATAACATTTCAGTGCATAGAATATGTAATCTAAGGCAAATTCCTAATTCTGTAACTTTTATTCAGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAGTCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT-GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT-AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT-CTAGGATTTA-AACATGTTTTTACTGCAAGAAGATTTTATAATGTTCGATTAAAAAAAAGA]
[+] EMBL AK103256 [GACGTTCTGCTCTCTGAGCTGATATACTTCCGTTCGCTACGATGCTCTGCTGGGCTCTGATGGTTTCCTGAACTGCTCTATGTTGTGTTTGTTTGTGTTTCTTCTCGCGTGCAGTCCAAGGCGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGGTAAAGAATTCAGCACCCCTCTAATTTTATAATTGTGTAGTACAGAATCCATACGGTAACCAAGCGTTCAATTATTTCTTCTGTTCATAAGACCGATCGATTCAGCTCAATCTGGGTTTGATTTGGCTGGATTGTGTTGGTCTTAGTCTATTGTGTGTTGGGGCTATACTCCAGTTTTGGAGCTTGGATCTGTTTAGGGGTTGGGCTCTTGTTATTCTGCTCGTTAGGTGATGCAATTTTGCAGCCTTCCGTTCGTTGAAAGTTGATACAGGGGGCTAGTTGAATGTTACTAAGCTTGTATGAAGAATTGAAGTTAGAGAACTTATGACTAGAAACAGTTCATGAAGAAATTGTTTGAAGCATCCGAGAAACTAGGAGTATTTTATAGCGGTCTTTAGATTTATGAGGTCTATTACCAGTAGTAGGATAGATATGGCCCATTATTATTATTATATAAGAAAAGATGAAAGGTCTAGATTGATTTTACTACCAGTAGAGACCTCTGTAAAGTGAATTTCAATCAACAAAGTAGAACATTCAACTGACTTGCCCATCAGCTTTCAGCTATGGCTTCTGCTGCTGGCTGGCATTCACAATTTAACATATATTTTCTTGGATATGAGTAGGGAATGACTTTGGAAGCATCAATTTAGGCCTTGATTGAAACACTGATGGGACTTGCATACTGCCTTATACTCCTACCTGCACTGTAGACATGTCCAATGTTTGGTGTATTGCAAAAAAGAAATTAGGAATTTAGTTTTTTTCCCCTTTGGCTATTACTAATCTATATAATGGACATAGGGCTGGAAAGCACAGAATTTATAACGTCTAGCCATTCAAATTTGACATTGAGCTCAGTGGAATATGCTCCTCACCGGGTGACACAAACTGTTCTGTTACTCCCTCCAGTCATTTAGTTCTCCCAACGTCAGACACATTAAAGTAGAGAGATTAGTTTCCAACCCAATTGGCCACTTACCATGCTATTATATAGGCTGCATATACTCATAAAAAATTGCTTCAGGCTGTCAAGCTTAGTTGGTTTACATTTACTTTGTAATGTTGACTGTAGGATTATCGGTACCTGTAACGAATCGGTTAACACTGGTATTCAGAATTCAGTATTTGCCCTGGTTCATTACAATGCTTATATGTGTTGTGCACTTGTGCTAGTTTAGGTGTTACATTTCTGATTTTTTTTATCTTATCCAAATAAATAACATTTCAGTGCATAGAATATGTAATCTAAGGCAAATTCCTAATTCTGTAACTTTTATTCAGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAGTCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA AACATGTTTTTACTGCAAGAAGATTTTATA ]
[+] EMBL AK069197 [ GTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAGTCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA AACATG ]
[+] EMBL CB096594 [ TGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAGTCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTAGTGAACAAAGGGTACGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGTGGGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGNTGAGCAAATATGCCAGTAATCTAGACNACCGGTTATATATTGGTCTTTGCGNGGAAAGGTTTTGNTCATCGGTTTGNCCATGTAAGCGAGGTAT ]
[-] EMBL CB677465 [ TTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCTTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAATTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCGGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATGTAGACAACCGTTTATACATTGTTGTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATATATAGCCATTGTTATTAGTATTGTGAGTTGTACTTTAGATGAGAGGACATGCTCCACAGGATATATTGGTGCACTGTATCAGGGTGAATTGATAGGATTTATAGCATGTTTTTt ]
[-] EMBL CB656176 [ tgGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA AACAAGGTTTTACTGCAAGAAGATTTTATAATGTTCGATTAAAAAAAAGA]
[-] EMBL CB671616 [ CCATAAGGAGCGAGAACCCCGTGGTGTTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA ]
[+] EMBL CB679138 [ CCGTCGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTGAAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATTGT GGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA AACATGTTT ]
[+] EMBL AK104972 [ GCCATCATCGACAACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACGCCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA AACATGTTTTTACTGCAAGAAGATTTTATA ]
[-] EMBL BE229301 [ CGTGCAGCCTGCCCAGATTGTGGCTGCCGTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAGTTTTTGTTCATCGTTTTGCCCATGT AGCGAGGTATCCATTGTGGTATAGGCTTATTTATAGCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATATATTCGTGCACTGTATCATGCTGAATT CTAGGATTTA AACATGTTTTTACTGCAAGAAGATTTTATAA ]
consensusID : consensus_13240#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1073 fasta sequence
[TCTCTTACCTCACCTCGTTCTCTCCGCCACCGCCGCCGCCGCCTCCATTCCTCCACCGCCGCCACCCCAAGACTTCCCCCCACCTTTATATAGCGGACCACCAACCCATCGCCTGCGCGTCCTCCCGAGAAAGAGAGAGAGAGAGAGAGAGATCCCGACCTCAACAATGGCGGCCGCTTCCTCCCTCCACGCCGCCCCGCGGGTGGGATCCTCCTCCTCCTTCTCCTCCTCCTCCTCCGCTGGCCGCAGATCAGCCTCCGCGGCGAGGAGCGTGCGCGTGGCGGCGGCGGCCGGATCGTGCGCGGCGCGGCGGGCGGGGGGAAGGATGGTGGCGCGGGCCGCCGTTGCATCCAAGGCGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAGTCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAG]
[+] EMBL CB677464 [TCTCTTACCTCACCTCGTTCTCTCCGCCACCGCCGCCGCCGCCTCCATTCCTCCACCGCCGCCACCCCAAGACTTCCCCCCACCTTTATATAGCGGACCACCAACCCATCGCCTGCGCGTCCTCCCGAGAAAGAGAGAGAGAGAGAGAGAGATCCCGACCTCAACAATGGCGGCCGCTTCCTCCCTCCACGCCGCCCCGCGGGTGGGATCCTCCTCCTCCTTCTCCTCCTCCTCCTCCGCTGGCCGCAGATCAGCCTCCGCGGCGAGGAGCGTGCGCGTGGCGGCGGCGGCCGGATCGTGCGCGGCGCGGCGGGCGGGGGGAAGGATGGTGGCGCGGGCCGCCGTTGCATCCAAGGCGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCTCAA ]
[+] EMBL CB671615 [ TCCCCCCACCTTTATATAGCGGACCACCAACCCATCGCCTGCGCGTCCTCCCGAGAAAGAGAGAGAGAGAGAGAGAGATCCCGACCTCAACAATGGCGGCCGCTTCCTCCCTCCACGCCGCCCCGCGGGTGGGATCCTCCTCCTCCTTCTCCTCCTCCTCCTCCGCTGGCCGCAGATCAGCCTCCGCGGCGAGGAGCGTGCGCGTGGCGGCGGCGGCCGGATCGTGCGCGGCGCGGCGGGCGGGGGGAAGGATGGTGGCGCGGGCCGCCGTTGCATCCAAGGCGGAATCACCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGG ]
[+] EMBL CB656175 [ GCATCCCTTGAGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATGAAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTACAAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATTGCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTTGTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGCGGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCTGGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAGTCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATGAAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAACCTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTGCGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAGGCTGCGAAGACCCTGGTGAACAAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13240#0 GACGTTCTGCTCTCTGAGCTGATATACTTCCGTTCGCTACGATGCTCTGCTGGGCTCTGA 60
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TGGTTTCCTGAACTGCTCTATGTTGTGTTTGTTTGTGTTTCTTCTCGCGTGCAGTCCAAG 120
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 GCGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTCTGACGGGTAAAGAATTCAGCACCCC 180
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TCTAATTTTATAATTGTGTAGTACAGAATCCATACGGTAACCAAGCGTTCAATTATTTCT 240
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TCTGTTCATAAGACCGATCGATTCAGCTCAATCTGGGTTTGATTTGGCTGGATTGTGTTG 300
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 GTCTTAGTCTATTGTGTGTTGGGGCTATACTCCAGTTTTGGAGCTTGGATCTGTTTAGGG 360
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 GTTGGGCTCTTGTTATTCTGCTCGTTAGGTGATGCAATTTTGCAGCCTTCCGTTCGTTGA 420
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 AAGTTGATACAGGGGGCTAGTTGAATGTTACTAAGCTTGTATGAAGAATTGAAGTTAGAG 480
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 AACTTATGACTAGAAACAGTTCATGAAGAAATTGTTTGAAGCATCCGAGAAACTAGGAGT 540
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 ATTTTATAGCGGTCTTTAGATTTATGAGGTCTATTACCAGTAGTAGGATAGATATGGCCC 600
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 ATTATTATTATTATATAAGAAAAGATGAAAGGTCTAGATTGATTTTACTACCAGTAGAGA 660
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 CCTCTGTAAAGTGAATTTCAATCAACAAAGTAGAACATTCAACTGACTTGCCCATCAGCT 720
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TTCAGCTATGGCTTCTGCTGCTGGCTGGCATTCACAATTTAACATATATTTTCTTGGATA 780
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TGAGTAGGGAATGACTTTGGAAGCATCAATTTAGGCCTTGATTGAAACACTGATGGGACT 840
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TGCATACTGCCTTATACTCCTACCTGCACTGTAGACATGTCCAATGTTTGGTGTATTGCA 900
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 AAAAAGAAATTAGGAATTTAGTTTTTTTCCCCTTTGGCTATTACTAATCTATATAATGGA 960
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 CATAGGGCTGGAAAGCACAGAATTTATAACGTCTAGCCATTCAAATTTGACATTGAGCTC 1020
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 AGTGGAATATGCTCCTCACCGGGTGACACAAACTGTTCTGTTACTCCCTCCAGTCATTTA 1080
consensus_13240#1 -----------TCTCTTACC---TCACCTCGTTCTCTCCGCCACCGCCGCCGCCGCCTCC 46
** *** * ** ** * ** ** ** *
consensus_13240#0 GTTCTCCCAACGTCAGACACATTAAAGTAGAGAGATTAGTTTCCAACCCAATTGGCCACT 1140
consensus_13240#1 ATTCCTCCACCGCC-GCCACCCCAAGACTTCCCCCCACCTTT---ATATAGCGGACCACC 102
*** *** ** * * *** ** *** * * * ****
consensus_13240#0 TACCATGCTATTATATAGGCTGCATATACTCATAAAAAATTGCTTCAGGCTGTCAAGCTT 1200
consensus_13240#1 AACCCATCGCCTGCGCGTCCTCCCGAGAAAGAGAGAGAGAGAGAGAGAGATCCCGACCTC 162
*** * * ** * * * * * * * * * * * **
consensus_13240#0 AGT--TGGTTTACATTTACTTTGTA-ATGTTGACTGTAGGATTATCGGTACCTGTAACGA 1257
consensus_13240#1 AACAATGGCGGCCGCTTCCTCCCTCCACGCCGCCCCGCGGGTGG--GATCCTCCTCCTCC 220
* *** * ** ** * * * * * ** * * * * *
consensus_13240#0 ATCGGTTAACACTGGTATTCAGAATTCAGTATTTGCCCTGGTTCATTACAATGCTTATAT 1317
consensus_13240#1 TTCTCCTCCTCCTCCTCCGCTGGCCGCAG-ATCAGCC----TCCGCGGCGAGGAGCGTGC 275
** * ** * * * *** ** *** * * * * * *
consensus_13240#0 GTGTTGTGCACTTGTGCTAGTTTAGGTGTTACATTTCTGATTTTTTTTATCTTATCCAAA 1377
consensus_13240#1 GCGTGGCGGCGGCG-GCCGGATCGTGCGCGGCGCGGCGGGCGGGGGGAAGGATGGTGGCG 334
* ** * * * ** * * * * * * * * *
consensus_13240#0 TAAATAACATTTCAGTGCATAGAATATGTAATCTAAGGCAAATTCCTAATTCTGTAACTT 1437
consensus_13240#1 CGGGCCGC----CGTTGCATCCAAGGCGGAATCGCCGGCGAGCGCGGCCTCCTCCAAGTC 390
* * ***** ** * **** *** * * * ** ** *
consensus_13240#0 TTATTCAGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATG 1497
consensus_13240#1 TGA--CGGTCATGAGGTCTTACTGTTTGAGGCTCTTCGCGAGGCCTTGATAGAAGAGATG 448
* * * *****************************************************
consensus_13240#0 AAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTAC 1557
consensus_13240#1 AAAGAAGATCCAACGGTATGTGTCTTTGGTGAAGATGTCGGTCACTATGGAGGTTCTTAC 508
************************************************************
consensus_13240#0 AAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATT 1617
consensus_13240#1 AAGGTGACCAAAGGTCTGGCTGAGATGTTTGGAGACCTACGAGTCCTTGATACCCCTATT 568
************************************************************
consensus_13240#0 GCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTT 1677
consensus_13240#1 GCTGAGAACTCATTCACCGGCATGGGAGTTGGAGCAGCGATGAAGGGGTTGAGGCCTGTT 628
************************************************************
consensus_13240#0 GTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGC 1737
consensus_13240#1 GTTGAAGGAATGAACATGGGTTTCCTTCTCCTTGCTTACAACCAAATCTCAAACAACTGC 688
************************************************************
consensus_13240#0 GGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCT 1797
consensus_13240#1 GGAATGCTTCACTACACCTCTGGTGGCCAGTTCAAAATCCCAATCGTGATCCGAGGTCCT 748
************************************************************
consensus_13240#0 GGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAG 1857
consensus_13240#1 GGTGGAGTTGGTCGCCAGCTTGGTGCTGAGCACTCCCAGCGTCTGGAGTCTTACTTTCAG 808
************************************************************
consensus_13240#0 TCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATG 1917
consensus_13240#1 TCGATCCCCGGCCTCCAGATGGTTGCTTGCTCTACCCCTTACAACGCCAAGGGTCTGATG 868
************************************************************
consensus_13240#0 AAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAAC 1977
consensus_13240#1 AAAGCCGCCATAAGGAGCGAGAACCCCGTGGTGCTATTCGAGCACGTCCTTCTGTACAAC 928
************************************************************
consensus_13240#0 CTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTG 2037
consensus_13240#1 CTGAAGGAGAAAATTCCCGACGAGGAATATGTTCTATGCCTGGAGGAGGCTGAGATGGTG 988
************************************************************
consensus_13240#0 CGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAG 2097
consensus_13240#1 CGTCCCGGAGAACATGTTACCATCCTCACATACTCGCGGATGAGGTACCATGTGATGCAG 1048
************************************************************
consensus_13240#0 GCTGCGAAGACCCTGGTGAACAAAGGGTATGATCCCGAGGTCATCGACATCAGGTCGTTG 2157
consensus_13240#1 GCTGCGAAGACCCTGGTGAACAAAG----------------------------------- 1073
*************************
consensus_13240#0 AAGCCATTTGACCTGCACACCATAGGCAACTCTATCAAGAAGACCCACCGCGTGCTGATT 2217
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 GTGGAGGAGTGCATGCGCACGGGCGGGATCGGCGCCAGCTTGAGATCGGCCATCATCGAC 2277
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 AACTTCTGGGACTACCTTGACGCACCCATCATGTGCTTGTCGTCGCAGGATGTGCCGACG 2337
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 CCGTATGCTGCGCCTCTGGAGGATGCCACCGTCGTGCAGCCTGCCCAGATTGTGGCTGCC 2397
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 GTTGAGCAAATATGCCAGTAATCTAGACAACCGTTTATACATTGTTCTTTGCGTGGAAAG 2457
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TTTTTGTTCATCGTTTTGCCCATGTAGCGAGGTATCCATTGTGGTATAGGCTTATTTATA 2517
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 GCCATTTTTATTCGTATTCTGAGTTGTACTTTAGCTGCGAGGACATGCTCCACAGGATAT 2577
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 ATTCGTGCACTGTATCATGCTGAATTCTAGGATTTAAACATGTTTTTACTGCAAGAAGAT 2637
consensus_13240#1 ------------------------------------------------------------
consensus_13240#0 TTTATAATGTTCGATTAAAAAAAAGA 2663
consensus_13240#1 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||