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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13257#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 3734 fasta sequence
[CTTTCGCCTCCGCGACGCATATGCCTCCGCCTCCGCCTCGTCGCGGCGCCCCCAAACCCTAGCCCGGCGCGGCGAGTCCCCCATCGGCGGCGGGAGCGGCGGGAGTAGGCGGGAAGGCGGGATCTCCTCCGTCCCACATGGCGGCGGCGGCGGCGGTTGCGGGGGCGGGCGGGGTGGGGCACGTGGTGGAGAGGTTCAGGGCGAGGCTGCGGGAGGAGCAGGAGGAGGAGGAGGGGGGAGGCGGGGAGGTGGCGGCGGCGGCGGTGGTGCGGGTGTACGTGGAGGTGCTCTCGGAGCTCACGTTCAACTGCAAGCCCATCATCACCGAGCTCACCATCATCGCCGGGCAGCACGCGGCCCTCGCCGCGAGGGGGATCGCCGACGCCATCTGCGCCCGCATCGCGGAGGTGTCTGCCGACCAGAAATTACCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACATAGGACGAGAATATGTAGGGCATTTTGCCGCTAGGTTGCAGAAGGTATTTTGTGATGCCTATAGGAAAGTTCACCGCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCTCTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTGCCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAACTTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGCAACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGGAGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAACCAGCGTGCCCTCTTTACCTCCCCTTGGAACCCTGAGAGCTGGATTTCTTGGGCCAAACAGTGGACTACTGGAATCTGATATTGTGAGGCACAGTTGGCCAGGCCAGGCTCCTCGACCAGCAATTGATGGGCCACCACTAAATCTCGAAGATAGAATTCCTACTAACGGGCCCGTTGACAGAACTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACCAGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGCAGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAATGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATGATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCACAAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTGTACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGTTACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC-AAGA-GCCATTTGAAGATTTCTACAGTGATGAAA-CTGAAGAGTGGA-TGTACAAAGGTGCAGTTT-ATATGAATGCACCAGATGGAAATA-TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT-CTAT-CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATATTTGGAAATCCCCATGTCTACTAGGTGATAGGCAGCCCTAGTTCAGAACGGTGCAATCACTCCACTGAACTTGCGAAACAATATCTTTCTTTCTTGTTTCCCTTCTTTCCTTTTGTGCAGGACAATATCAGTCGGCTACCTGGCTGGTAACTTCCAAAATCGAAAGGACATGTAAGGCGATCAAGGATGGAAGCAAAATCATCAGCTTAATTTCCAGAAAATGAAGGAGATGCTCTCTTCTTGAATTTTCCCCCTTTTTTCATACTCTTTTGTATGGCATGGCGTTCTGGTATTAACACAACAGTTCATTTTGGTCGCATGTATGACTCATCTTGCTGGATATGTTTGCACATGTCAAGTTCAGACTAGATTGTTTTAAAGTATGCT]
[+] EMBL AK099689 [CTTTCGCCTCCGCGACGCATATGCCTCCGCCTCCGCCTCGTCGCGGCGCCCCCAAACCCTAGCCCGGCGCGGCGAGTCCCCCATCGGCGGCGGGAGCGGCGGGAGTAGGCGGGAAGGCGGGATCTCCTCCGTCCCACATGGCGGCGGCGGCGGCGGTTGCGGGGGCGGGCGGGGTGGGGCACGTGGTGGAGAGGTTCAGGGCGAGGCTGCGGGAGGAGCAGGAGGAGGAGGAGGGGGGAGGCGGGGAGGTGGCGGCGGCGGCGGTGGTGCGGGTGTACGTGGAGGTGCTCTCGGAGCTCACGTTCAACTGCAAGCCCATCATCACCGAGCTCACCATCATCGCCGGGCAGCACGCGGCCCTCGCCGCGAGGGGGATCGCCGACGCCATCTGCGCCCGCATCGCGGAGGTGTCTGCCGACCAGAAATTACCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACATAGGACGAGAATATGTAGGGCATTTTGCCGCTAGGTTGCAGAAGGTATTTTGTGATGCCTATAGGAAAGTTCACCGCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCTCTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTGCCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAACTTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGCAACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGGAGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAACCAGCGTGCCCTCTTTACCTCCCCTTGGAACCCTGAGAGCTGGATTTCTTGGGCCAAACAGTGGACTACTGGAATCTGATATTGTGAGGCACAGTTGGCCAGGCCAGGCTCCTCGACCAGCAATTGATGGGCCACCACTAAATCTCGAAGATAGAATTCCTACTAACGGGCCCGTTGACAGAACTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACCAGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGCAGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAATGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATGATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCACAAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTGTACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGTTACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAATGCACCAGATGGAAATA TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT CTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTC ]
[+] EMBL CF303157 [ ggGATGCCTATAGGAAAGTTCACCGCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCTCTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTGCCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCA ]
[+] EMBL CB632334 [ CGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTCATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATCAACCAATAACTCGTGGAAATCGGCAAGTGAATGATGTGGAAGAGGATCAAATAAATGGTTTAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAATCTACTATGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTCGTTCACATACTGGGTTGATAAGGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCATTAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATGCATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACCCCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTGCACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAACTTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGCAACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGGAGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAAACAGCGTGC ]
[+] EMBL BP184587 [ CTAACGGGCCCGTTGACAGAACTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACCAGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGCAGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAATGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATGATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCT ]
[+] EMBL OSS1517A [ GAGAAGCAAAGGTCCTCACCTGCTCATGCTCCAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCAAACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCAGTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGNACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGA ]
[+] EMBL BP184592 [ TGGATCGGAGAACAATGAATGCTGATGATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGGGCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTCATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCACAAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTGTACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGTTACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTG ]
[+] EMBL CF306629 [ ATCATCGCAAGTTGGGGGCCCTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAACCACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAA ]
[-] EMBL CB632335 [ AGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGAACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCCTTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAATGCACCAGATGGAAATA TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT CTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGGGTGCTGCTTTTCCATTATTATAGTATATTTG ]
[+] EMBL BP184588 [ CAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACAGAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGTTAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAGTTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACATGTGCTTTATGTC AAGA GCCATTTGAAGATTTCTACAGTGATGAAA CTGAAGAGTGGA TGTACAAAGGTGCAGTTT ATATGAATGCACCAGATGGAAATA TTGGTGGTCTAGAAAGGTCGCAGTTGGGACCTATTGTCCATGCTAAATGT CTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATAaaaa ]
[+] EMBL AU083565 [ TGTGCTTTATGTCAAAGAGGCCATTTGAAGATTTCTACAGTGATGAAACCTGAAGATTGGATTGTACAAAGGTGCAGTTTAATATGAATGCACCAGATGGAAATATTTGGTGGTCTAGAAAGGTCGCAGTT GGACCTATTGTCCATGCTAAATGTCCTAT CTGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCAaaa ]
[+] EMBL CB630488 [ CTATCCCGGGCCAAACAATACTTAGGCCGGCCTAGCTGCTGGTACTCTTGCCTCATTTGTTTCGTGGCTGGGGCTGTAGACAAGACATGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAATTGACAACCATGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGTTCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATATTTTGAAATCCCCATGTCTACTAGGTGATAGGCAGCCCTAGTTCAGAACGGTGCAATCACTCCACTGAACTTGCGAAACAATATCTTTCTTTCTTGTTTCCCTTCTTTCCTTTTGTGCAGGACAATATCAGTCGGCTACCTGGCTGGTAACTTCCAAAATCGAAAGGACATGTAAGGCGATCAAGGATGGAAGCAAAATCATCAGCTTAATTTCCAGAAAATGAAGGAGATGCTCTCTTCTTGAATTTTCCCCCTTTTTTCATACTCTTTTGTATGGCATGGCGTTCTGGTATTAACACAACAGTTCATTTTGGTCGCATGTATGACTCATCTTGCTGGATATGTTTGCACATGTCAAGTTCAGACTAGATTGTTTTAAAGTATGCT]
consensusID : consensus_13257#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence
[AGACGCAAAAGGAAGAGTAAGATTGCTGTTCCTGCTGATGAGGCCACAACATTGTGCTTTATGTCCAGACCCTGTTGAAGATTTCTACAGTGGATGGAACTGAAGAGTGGATGGTACACAAGGTGCAGTTTATATGAATGCCACAGATGGAAATATTTGGTGTCTAGAAAGGTCGCCAGTTGGGACCTAATTGGTCCATAGCTAAAGAGTCTATCTGGGCCCAACCATACTTATGGCCGGCCTATCTGCTGGTGACTCTGCCCTCATGTTGTTTCGTGCCTGGGGCTGTAGACCAGACATGGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCCATTGACAACCACTGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACCACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCCTTTTTGCTCGACAGTCACTATGGTGCATG]
[+] EMBL BI807749 [AGACGCAAAAGGAAGAGTAAGATTGCTGTTCCTGCTGATGAGGCCACAACATTGTGCTTTATGTCCAGACCCTGTTGAAGATTTCTACAGTGGATGGAACTGAAGAGTGGATGGTACACAAGGTGCAGTTTATATGAATGCCACAGATGGAAATATTTGGTGTCTAGAAAGGTCGCCAGTTGGGACCTAATTGGTCCATAGCTAAAGAGTCTATCTGGGCCCAACCATACTTATGGCCGGCCTATCTGCTGGTGACTCTGCCCTCATGTTGTTTCGTGCCTGGGGCTGTAGACCAGACATGGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCCATTGACAACCACTGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACCACTGTAAAATGCCTTTTGTAATATAGTGATTGAGCATGAGCCTTTTTGCTCGACAGTCACTATGGTGCATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13257#0 CTTTCGCCTCCGCGACGCATATGCCTCCGCCTCCGCCTCGTCGCGGCGCCCCCAAACCCT 60
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AGCCCGGCGCGGCGAGTCCCCCATCGGCGGCGGGAGCGGCGGGAGTAGGCGGGAAGGCGG 120
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GATCTCCTCCGTCCCACATGGCGGCGGCGGCGGCGGTTGCGGGGGCGGGCGGGGTGGGGC 180
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ACGTGGTGGAGAGGTTCAGGGCGAGGCTGCGGGAGGAGCAGGAGGAGGAGGAGGGGGGAG 240
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GCGGGGAGGTGGCGGCGGCGGCGGTGGTGCGGGTGTACGTGGAGGTGCTCTCGGAGCTCA 300
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CGTTCAACTGCAAGCCCATCATCACCGAGCTCACCATCATCGCCGGGCAGCACGCGGCCC 360
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TCGCCGCGAGGGGGATCGCCGACGCCATCTGCGCCCGCATCGCGGAGGTGTCTGCCGACC 420
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AGAAATTACCATCTTTGTATCTGCTAGACAGTATTGTGAAGAACATAGGACGAGAATATG 480
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TAGGGCATTTTGCCGCTAGGTTGCAGAAGGTATTTTGTGATGCCTATAGGAAAGTTCACC 540
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GCAATCAGCATGCTGCAATGCGACACCTCTTTGGTACCTGGTCACAAGTGTTCCCTTCCT 600
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CTGTGCTACGCGGAATTGAGGATGAGCTTCAGTTTTCCCCCTTAGAGAATAAGCGCTCTG 660
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CCACAGCGACTGATATCCGACAGTCAGAGTCGATATCTCCTAGACTGTCTCATGCCATTC 720
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ATGTAAATCCAAAATATTTAGAAGCACAACAACAATTTAAGCAGTCAACTTCGGTGCATC 780
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AACCAATAACTCGTGGAAATCGGCAAATGAATGATGTGGAAGAGGATCAAATAAATGGTT 840
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TAACATCTAAAAGTTCGCGAGGATGGCCTGCAACTAATTCAAAGCTCCAGAAGTCTACTA 900
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TGCTGTATGCTGACGATCTTGATCAACAAGAGGCATTTTGTTCACATACTGGGTTGATAA 960
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GGCCAAGTTCGCCACATCTTTTAAGCAAACATCCTTCCATACTCAATACAGAAGGACCAT 1020
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TAGCCAATTCAAGAAGAACCATGTCAAGATCACCACCTCTTGATGTGCTCCCTAGAAATG 1080
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CATCCCCCAAGAGAGCTCTGGAGAGGCCACCACTATCGCATTCTGTTCTAGGACCTGACC 1140
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CCAGAAGATTGCCTGATCGAAATGGTTGGTTTGAACGGAAGTGGGCTTTTGAGGATGGTG 1200
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CACAACGGCCTTCGATGAGCATACTTGATGAAGAATATAGAAAGCAAAGTGCAAGGGAAC 1260
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TTATTGATGCTTATGGAAATTCTCAAGGAAAAGATGTCGATGAAAGGCTTCCCAAGATGC 1320
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AACGTCTAGATTCAAATGGCATGGCAGGCAGACCTAGTGCACAAAAATGGCTAACTTCGG 1380
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AGGAAGAAGAGTATACTTGGGAAGATATGAGTCCTACTTTAACTGATCGAAACAGAACCA 1440
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GCGTGCCCTCTTTACCTCCCCTTGGAACCCTGAGAGCTGGATTTCTTGGGCCAAACAGTG 1500
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GACTACTGGAATCTGATATTGTGAGGCACAGTTGGCCAGGCCAGGCTCCTCGACCAGCAA 1560
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TTGATGGGCCACCACTAAATCTCGAAGATAGAATTCCTACTAACGGGCCCGTTGACAGAA 1620
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CTAATAACAGGAGATATCCAGGCAATTTTGGTGTTCAGAATGGTGCCTTTTTAGATTACC 1680
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AGAGTTCTGAACATACTCTTGATCCTGGGAGAACTACCATGCCAGTTCCACCTTGGCAGC 1740
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AGACTATTGGTCAGCCGTTGCGGGTACAAGCGCCCCAGCCTGCATCAATTCTGAATAGAA 1800
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TGCCACTGCCTACTGATAGTGAAGTGCCAGTCAAGAGGTTGGCCACTGGTGGTACATATG 1860
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ATGCGCTGAATGTAGATATTCCATTGTTGGAGAAGCAAAGGTCCTCACCTGCTCATGCTC 1920
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CAATGGAATGGCCTCTTAATACACAGTCACTAACTATACAACCAATTCCACCTGATACCA 1980
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AACATCCTAGAGGCGCATCAGATGGTCTAGATTCTAGACCATTTATTAGCCAAGGGTCCA 2040
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GTTCGTCTGTTTTTGTTCCACAGCATCATGCCTTGGATCGGAGAACAATGAATGCTGATG 2100
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ATTTAGCTCAACCATCATATCAGCATCCAGATTTGTTGTCATTGAGTCAACAAAATCAGG 2160
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GCACAGTTTTGGGAAACCAAGGTCAACCTCATCACCCGCCGCAATTTCATCCCCATCCTC 2220
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ATTCTCACCTTCAAGAGACAATTAGAAGCTTTGCCCCCAGTATGTCTGTTGCACCTCCAC 2280
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 AAAATATATTCCATGGACAAGGAGGTAGCGCAGCTGCACTCCTGCCAAGTTCTTTCCCTG 2340
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TACCACCTGCAGTACCACCCTATGGCTTGCAGTCTATGCCTGGATTTCCTTTGCCATCGT 2400
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TACCTTCAGGACCACCTCCTCCATCGCAGATAGGTCCATCATCATCGCAAGTTGGGGGCC 2460
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CTCCACTTGTCTCTGGATTGTTAAGTAACCTTATGCAGCATGGTATAATCTCATTGCAAC 2520
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 CACCCAGCCAACCTCAGGATTCTGTGGGTGTTGACTTCAATGTTGACCTCAAGGTACGGA 2580
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ACGAGTCTGTCATTAATGCTCTGTATCAGGATCTTCCGAGGCAATGCAAAACTTGTGGCC 2640
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TTCGTTTTAAATGCCAAGAAGAACATCGTGCTCACATGGATTGGCATGTTACGAAAAACA 2700
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GAAATTCAAAGAATCGTAAGCAAACTTCACGTAAATATTTTGTCACTGTGGGTGAATGGT 2760
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TAAGAGCAGCAGAAACAGTAGGAAACGATGGTGTTCCTTCTTTTGAGCCTGCCGAACCAG 2820
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TTGCAGACGCAAAGGAAGAGAAAGAATTGGCTGTTCCTGCTGATGAGGACCAAACAACAT 2880
consensus_13257#1 ----AGACGCAAAAGGAAGAGTAAGATTG-CTGTTCCTGCTGATGAGGCCACAACAT--T 53
********* * * * **** ****************** * **** *
consensus_13257#0 GTGCTTTATGTCAAGAGCCATTTGAAGATTTCTACAGTG-ATGAAACTGAAGAGTGGATG 2939
consensus_13257#1 GTGCTTTATGTCCAGACCCTGTTGAAGATTTCTACAGTGGATGGAACTGAAGAGTGGATG 113
************ *** ** ****************** *** ****************
consensus_13257#0 -TACA-AAGGTGCAGTTTATATGAATGCACCAGATGGAAATATTGGTGGTCTAGAAAGGT 2997
consensus_13257#1 GTACACAAGGTGCAGTTTATATGAATGCCACAGATGGAAATATTTGGTGTCTAGAAAGGT 173
**** ********************** ************** * ************
consensus_13257#0 CGC-AGTTGGGACCTATT--GTCCAT-GCTAAAT-GTCTATCTGGGCCAAACAATACTTA 3052
consensus_13257#1 CGCCAGTTGGGACCTAATTGGTCCATAGCTAAAGAGTCTATCTGGGCCCAACCATACTTA 233
*** ************ * ****** ****** ************* *** *******
consensus_13257#0 -GGCCGGCCTAGCTGCTGGT-ACTCTTGCCTCAT-TTGTTTCGTGGCTGGGGCTGTAGAC 3109
consensus_13257#1 TGGCCGGCCTATCTGCTGGTGACTCTGCCCTCATGTTGTTTCGTGCCTGGGGCTGTAGAC 293
********** ******** ***** ****** ********** **************
consensus_13257#0 AAGACATG-TAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCAAT 3168
consensus_13257#1 CAGACATGGTAAACTACTGGAGAGAGCAGATTTTGGTATGCTTAGTATTTAATCCTCCAT 353
******* ************************************************ **
consensus_13257#0 TGACAACCA-TGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACAACTGTAAAATGC 3227
consensus_13257#1 TGACAACCACTGGGTTTGCATAGAATGTTCATGTGATGATAGTGTACCACTGTAAAATGC 413
********* ************************************* ************
consensus_13257#0 CTTTTGTAATATAGTGATTGAGCATGAGCATTTTTGCTCGACAGTCACTATGGTGCATGT 3287
consensus_13257#1 CTTTTGTAATATAGTGATTGAGCATGAGCCTTTTTGCTCGACAGTCACTATGGTGCATG- 472
***************************** *****************************
consensus_13257#0 TCAATCGTTTGGTCCCACCATCTCACATGCAGTGTGCTGCTTTTCCATTATTATAGTATA 3347
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TTTGGAAATCCCCATGTCTACTAGGTGATAGGCAGCCCTAGTTCAGAACGGTGCAATCAC 3407
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TCCACTGAACTTGCGAAACAATATCTTTCTTTCTTGTTTCCCTTCTTTCCTTTTGTGCAG 3467
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 GACAATATCAGTCGGCTACCTGGCTGGTAACTTCCAAAATCGAAAGGACATGTAAGGCGA 3527
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TCAAGGATGGAAGCAAAATCATCAGCTTAATTTCCAGAAAATGAAGGAGATGCTCTCTTC 3587
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TTGAATTTTCCCCCTTTTTTCATACTCTTTTGTATGGCATGGCGTTCTGGTATTAACACA 3647
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 ACAGTTCATTTTGGTCGCATGTATGACTCATCTTGCTGGATATGTTTGCACATGTCAAGT 3707
consensus_13257#1 ------------------------------------------------------------
consensus_13257#0 TCAGACTAGATTGTTTTAAAGTATGCT 3734
consensus_13257#1 ---------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||