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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13259#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 950 fasta sequence
[TCCCACCTCCCCACACGCAAGCTTCGCAGCGCAGCTTCGC-GGAGACAACGTGAGAAAGAAAGAAACGAGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCG-CCGCCGCCGCCGACGGCGTCGCGACGCCGTCGGCG-GGGACGGCCCCGCTGACCATCTT-CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG-CCGCGGAGCTCATGAGGCTGGCCGGCTCCGCGTGCTCGCCGCCGCAG-CCGGCGCACGCCG-CCGCGC-TCCCGGAGATGCCGATCGCGAGG-AAGGCG-TCGCTGCAGCG-TTTCCTCCAGAAGAGGAAGCACA-GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCG-CCGGAGAAAAGCTTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC-TCGGGCTCTGAAGATTTATCTGCCCGGTTT-AG-AGGAGGAGAATATCACAAAGGG-AGAAAAAAAATT-AAGTACTGAC-TAAATTGTTGTTTT-CCATGATTTAAGTTCGTCTCTG-TTTGAGATTTCTTTGG-CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTACTCAAAAAAATGGAAAAAAAAAAAAAAAAAAAAAAAATGAAATGACCGAAACAAACAAATA]
[+] EMBL AK061602 [TCCCACCTCCCCACACGCAAGCTTCGCAGCGCAGCTTCGC GGAGACAACGTGAGAAAGAAAGAAACGAGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCG CCGCCGCCGCCGACGGCGTCGCGACGCCGTCGGCG GGGACGGCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGAGCTCATGAGGCTGGCCGGCTCCGCGTGCTCGCCGCCGCAG CCGGCGCACGCCG CCGCGC TCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCG CCGGAGAAAAGCTTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTATCTGCCCGGTTT AG AGGAGGAGAATATCACAAAGGG AGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAAGTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTACTCAAAAGACTGGAAA ]
[+] EMBL AU197763 [ CAAGCTTCGCAGCGCAGCTTCGCTGGAGACAACGTGAGAAAGAAAGAAACGAGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCGCCCGCCGCCGCCGACGGCGTCGCGACGCCGTCGGCG GGGACGGCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGAGCTNATGA ]
[+] EMBL CA754319 [ AAGCTTCGCAGCGCAGCTTCGC GGAGACAACGTGAGAAAGAAAGAAACGAGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCG CCGCCGCCGCCGACGGCGTCGCGACGCCGTCGGCG GGGACGGCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGAGCTCATGAGGCTGGCCGGCTCCGCGTGCTCGCCGCCGCAG CCGGCGCACGCCG CCGCGC TCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACNACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCG CCGGAG AAAGCTTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTA ]
[+] EMBL AU057470 [ GCAGCGCA NTTCGC GGAGACAACGTGAGAAAGAAAGAAACGAGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCG CCGCCGCCGCCGACGGGTTCGCGACGCCGTC GCGNGGNACGGCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGAGTTCATGAGGCTGGCCGGCTCCGCGTGCTCGCCGCCGCAG CCGGCGCACGCCG CCGCGCTTCCCGGANTTAACGATCGCGAGG AANGCG TCGC ]
[+] EMBL AU057537 [ AACGTGAGAAAGAAAGAAACGAGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCG CCGCCGCCGCCGACGGGTTCGCGACGCCGTCGGAG NGAACGGCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGA CTCATGAGGCTGGCCGGCTCCGCGTGNTCGCCGCCGCAG CCGGCGCACGCCG CCGCGCTTCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACAGGGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCG CGGCG CCGGAGAAAAGCTTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGAAATGGCTTCGGGCTCTGAAGATTTATCTGCCCGGTTTAAGAAGGAGGAGAATATCACAAAGGGAAGAAAAAAAATTAAAGTACTGACTTAAATTGTTGTTTTCCCATGATTTAAGTTCGTCTCTGTTTTAAGATTTCTTTGGCCCCAAACC ]
[+] EMBL AU057826 [ AGACGAACGCGAGGTGGTGGAGGTGGACGCCATGGCCGCCGCCGGCAGCAGCAGCAGGTTCGCCGTCACGTGCGGCCTCCTCAGCCAGTACATGCGGGAGCGCCAGCAGCCGCAGCCGCCGGTGACGGTTCTTGAGGCGGTGGCGGAGGAGGAGGAGGAGGAGGACGCGCGGACTATGCAGCTCTTCCCCCCGCGCG CCGCCGCCGCCGACGGGTTCGCGACGCCGTC GCGNGGNACGGCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGA CTCATGAGGCTGGCCGGCTCCGCGTGGNAGCCGCCGCAG CCGGCGCACGCCG CCGCGCTTCCCGGAGATGCCGATCGCGAGG AAGGCGTTCGCTGCAGCGTTTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCG CGGCG CCGGAGAAAAG TTCGCCGTNGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGNTCTGAAGATTTAT TTCCCGGTTT AG AGGAGGAGAATATCACAAAGGG NGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAANTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAAAATT TTTCACTGATTTA ]
[+] EMBL AU057538 [ ctTCGGC GNGACGNCCCCGCTGACCATCTT CTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGG CCGCGGAGCTCATGAGGCTGGCCGG TCCGCGTGCTCGCCGCCGCAG CCGGCGCACGCCG CCGCGC TCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCG CCGGAGAAAAG TTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTATCTGCCCGGTTT AG AGGAGGAGAATATCACAAAGGG AGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAAGTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTACTCAAAAAAA ]
[+] EMBL AU057827 [ CCATCTTNCTACGACGGGAGGATGGTCGTGGTCGACGACGTCCCGGTCGAGAAGGCCCGCGGAGCTCATGAGGCTGGCCGGCTCCGCGTGCTCGCCGCCGCAG CCGGCGCACGCCG CCGCGC TCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCG CCGGAGAAAAG TTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTATCTGCCCGGTTT AG AGGAGGAGAATATCACAAAGGG AGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAAGTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTA AAAAA ]
[+] EMBL AU057471 [ cCCGCCGCAGCCCGGCGCACGCCGCCCGCGC TCCCGGAGATNCCGATCGCGAGGAAAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCG CCGGAGAAAAG TTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTATCTGCCCGGTTT AG AGGAGGAGAATATCACAAAGGG AGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAAGTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAaaaaaa ]
[+] EMBL CF308730 [ CCGGCGCACGCCG CCGCGC TCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAA GCGGCGGTGGCGTCGCCGGCG CCGGAGAAAAGCTTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTATCTGCCCGGTTT AG AGGAGGAGAATATCACAAAGGG AGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAAGTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTACTCAAAA ]
[-] EMBL CF308731 [ CGGCGCACGCCG CCGCGC TCCCGGAGATGCCGATCGCGAGG AAGGCG TCGCTGCAGCG TTTCCTCCAGAAGAGGAAGCACA GGATCACGACAACGAGCGAACCATACAAGAAGGCGGCGGTGGCGTCGCCGGCGCCCGGAGAAAAGCTTCGCCGTCGCGCCGGTGAAAGATGAGCCGGCGACATGGC TCGGGCTCTGAAGATTTATCTGCCCGGTTT AG AGGAGGAGAATATCACAAAGGG AGAAAAAAAATT AAGTACTGAC TAAATTGTTGTTTT CCATGATTTAAGTTCGTCTCTG TTTGAGATTTCTTTGG CCCAAACCCAAAGAGTTCTTTCACTGATTTAAGTGATTATTTCCTCCACTAGAGCATATACAGTGTTCTGAAAAATAATGGTAGATTTATCCATTTTTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTACTCAAAAA ]
[+] EMBL CF308403 [ TTGTTGATGTACAAGTACAACTGTCTCCATTTCTATGCATAGTATGTAATTAATAATTATTACTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAAATGACCGAAACAAACAAATA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||