cluster # 13275

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Oryza sativa
cluster # 13275 cluster # 13275 Sequences # 12 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13275#0 length = 2046 sequences # 11

consensus_13275#1 length = 686 sequences # 1

consensusID : consensus_13275#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 2046
fasta sequence

                              [AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCGAGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCGGGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGGAGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG---TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCAGCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAAAAAAAA]

[+] EMBL CB673558             [AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCGAGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCGGGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGGAGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG   TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK119594             [         ggaAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCGAGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCGGGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGGAGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG   TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCAGCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGC                                               ]
[+] EMBL CB648582             [                                                                                 AATCGCAGCGCGAGAATAACCCCAACCGAAGCGGCAGCGGGAGCAGCATCATCGGCGGATACAATAAGCAAGGGGAGCACCAGCCACGGGCAGGAGAGGAGAGTGCGCATGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCCCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCGCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGTCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGCGAGGTGAGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK121731             [                                                                                                                                                                                    AGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCACGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG   TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCAGCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGTCATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGCACAGAAAAATAG                                   ]
[+] EMBL CB646665             [                                                                                                                                                                                                   GCGGGATGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCCTCGCGTGGG   TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACAACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACTAGGCCCATCAGCCGCGGCGGCGGCTGTGGGAGGAAGAGGTGGCCCCCCGGAGGAAAGGGGAGCGCCATGCTGTGGGCGGAGCGGGTGTCCGGGTTCTTCTCCGCCACCATGGAGATGGTGGTGCTGTCCCCGTCTCTGCAATCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB643564             [                                                                                                                                                                                                                                  GCCTGCCTGCCGCCGCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGG   TTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAGCAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCATGCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTCCCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCACGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCCCGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCTCGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCACTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTACTTCGACCCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB640533             [                                                                                                                                                                                                                                                                         CTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCTCGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGGCCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTCGTCGCGTGGGTTTTTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGCGCTGCCGCTGGACAACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCACCAACCGCGGCGGCGGCGGTGGGAGGAAAAGGTGGCCGCCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK064068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGACCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCATCATCATAAATAAAAAGCACAGAAAAATAGACA                                ]
[-] EMBL CB673559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTTCTCCGACAGGTTCTGGTCGGACAAGCAGTTCTCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGAGGAAATGCCTTGTGTTAGATTGTTCTTGTTGGTA                                                                                                                                                                     ]
[-] EMBL CB648583             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGTGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCGCCGACCCCGTACAAATTTGTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACCTACATGTTTATTTTTTGTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGTGTTAGATTGTTCTTGTCGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATGGGTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGCttaaaggt                                                          ]
[+] EMBL AU181128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       cCTNAANTCATCACCACCATTACCTGTTCAAACACCTACATGTNTAATTTTTCNTCANTTCNTCTTTCTTTTGTTCTGTNCGATTAAATGCCTTGTGTTAGANTGNTCTTGTTGGTANTAGTGATCTCTTCTTCCACTTTTTTTGANCGTTTTGTTACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAAGCTTGCAGCCTCAGCATCATCATAAATNAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAAAAAAAA]




>consensus_13275#0
AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCG
AGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCG
GGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGG
AGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCC
GCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCT
CGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGG
CCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTC
GTCGCGTGGGTTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGC
GCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAG
CAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCAT
GCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTC
CCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCA
CGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCC
CGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCT
CGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCA
CTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGA
CCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTA
CTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCA
GCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGT
CATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGA
CCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTT
CACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTG
CTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACAC
GCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCT
CGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCG
GTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCC
GGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGC
CGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGA
CTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCG
CCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACC
TACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGT
GTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTT
ACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGC
ATCATCATAAATAAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAA
AAAAAA

consensusID : consensus_13275#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 686
fasta sequence

                              [GCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGGGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTTTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTTTTTTCCTTCTTTCGCCGACCCCGTACAAATTTTTGAGTTTTCAATTTTTTTCCCCCATTACCTGTTCAAACCCCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATCCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCCCTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG]

[-] EMBL CB643565             [GCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGGGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTTTGGGCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTTTTTTCCTTCTTTCGCCGACCCCGTACAAATTTTTGAGTTTTCAATTTTTTTCCCCCATTACCTGTTCAAACCCCTACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATCCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCCCTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG]




>consensus_13275#1
GCCGGGACGTTCGCGGGGCGCCGGCCGTGCTACTTCAACACGGGCGTCATGGTGCTCGAC
CTCGCCAGGTGGCGGCGGACGGGCTACACGCGGCGCATCGAGCGGTGGATGGAGATACAG
AAGTCGCCGGCGGGGCGCATTTACGAGCTCGGGTCGTTGCCGCCCTTCCTGCTGGTGTTC
GCGGGGCACGTGGCGCCGATCGAGCACCGGTGGAACCAGCACGGCCTCGGCGGGGACAAC
GTGTTCGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCCGGA
TCCGGCAAGCCGTGGGCGCGGCTCGGCGCCGGGCGGCCGTGCCCGCTCGACGCGCTTTGG
GCGCCGTTCGACCTGTACGGCCCGGCCGACTCCGCCGCGGAAGGGTCCCGGTAACCGCAA
CACTAAAGATGATTTTTTTCCTTCTTTCGCCGACCCCGTACAAATTTTTGAGTTTTCAAT
TTTTTTCCCCCATTACCTGTTCAAACCCCTACATGTTTATTTTTTCTTCATTTCTTCTTT
CTTTTGTTCTGTTCGATTAAATCCCTTGTGTTAGATTGTTCTTGTTGGTATTAGTGATCT
CTTCTTCCCCTTTTTTTGATCGTTTTGTTACTAAAAAAAGAGGTCATTTGTTTCCTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13275#0      AGCTCTGGCCGTAAAAAGGAAGGTGGGAGAGGCAGCAGAGGCGAGGCGAGGGAGCGAGCG 60
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      AGCGAGCGCCCGAATCCCCAAAATCGCAGCGCGAGAATAAACAAAACCGAAGCGGCAGCG 120
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      GGAGCAGCAGCATCGGCGGATACAATAAGCAAGGGGAGCAGCAGCCACGGGCAGGAGAGG 180
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      AGAGTGCGCAGGCGTGCGGGAGGGAGGAGGGGGGAAGAAGAAAATCGCCTGCCTGCCGCC 240
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      GCGGTGGTGGGTTGGTGGGTGCCGCCTCCTCCTGCTGCTGCTGCTGTTCCCCCATTACCT 300
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CGCCCCGCTTCGCATGGATTCCCCCTCGCTTCTCCCCCACTCCACCCGCCGATCCACCGG 360
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CCGGGGCAGCGCGAGGCGATGCAATTGAGGTGAGGTGAGACCGCCGCTTCTTCCGTCGTC 420
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      GTCGCGTGGGTTTTTTTTTTCTCTCTTTGGTGCTGGGGGATACAACAACCTGGCGGCCGC 480
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      GCTGCCGCTGGACGACGCCATCGCGCGCCTGCACGGCGTCTTGGGGTGGACGAGGCCCAG 540
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CAGCCGCGGCGGCGGCGGTGGGAGGAAGAGGTGGCCGCGCGGGGGAAAGGGGAGCGCCAT 600
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      GCTGTGGGCGGCGCGGGTGTCCGGGTTCTTCTCCGCCGCCATGGTGATGGTGGTGCTGTC 660
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CCCGTCGCTGCAGTCCTTCCCGCCCGCCGAGGCCATCCGGTCGTCGCAGTTTGACAGCCA 720
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CGTCCGCTTCCCTGGCCAGATCGCGGGGGGCGCCAGGGGCCTCGCCTTCCGTCGCGCCCC 780
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CGCGTTCCGCAATGCCGCTGACTGCGGCAACGCCACCGGCAATGTCTGCGACCCATCGCT 840
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CGTCCACATCGCGATTACGCTGGACGAGGAGTACCTCAGGGGCTCCGTCGCCGCGGTCCA 900
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CTCCGTCGTGCAGCACGCCACGTGCCCCGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGA 960
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CCCGGCGCTCGGCGACCTCGTCCGCGCCGTGTTCCCGCAGCTCCAGTTCAAGGTCTACTA 1020
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CTTCGACCCCGACCGCGTCCGCGGCCTCATCTCCACGTCGGTGAGGCAGGCCCTGGAGCA 1080
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      GCCGCTCAACTACGCCCGCAACTATCTGGCCGATCTCCTCGAGCCCTGCGTGCGCCGGGT 1140
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CATCTACCTCGACTCCGACCTCGTCGTCGTCGACGATGTCGCCAAGCTCTGGCGCACCGA 1200
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CCTCGGCGGCCGCACCGTCGGCGCGCCGGAGTACTGCCACGCGAACTTCACCAAGTACTT 1260
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      CACCGACAGGTTCTGGTCGGACAAGCAGTTCGCCGGGACGTTCGCGGGGCGCCGGCCGTG 1320
consensus_13275#1      -------------------------------GCCGGGACGTTCGCGGGGCGCCGGCCGTG 29
                                                      *****************************

consensus_13275#0      CTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACAC 1380
consensus_13275#1      CTACTTCAACACGGGCGTCATGGTGCTCGACCTCGCCAGGTGGCGGCGGACGGGCTACAC 89
                       ************************************************************

consensus_13275#0      GCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATCTACGAGCT 1440
consensus_13275#1      GCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGGCGGGGCGCATTTACGAGCT 149
                       *************************************************** ********

consensus_13275#0      CGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCG 1500
consensus_13275#1      CGGGTCGTTGCCGCCCTTCCTGCTGGTGTTCGCGGGGCACGTGGCGCCGATCGAGCACCG 209
                       ************************************************************

consensus_13275#0      GTGGAACCAGCACGGCCTCGGCGGCGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCC 1560
consensus_13275#1      GTGGAACCAGCACGGCCTCGGCGGGGACAACGTGTTCGGCAGCTGCCGCGACCTCCACCC 269
                       ************************ ***********************************

consensus_13275#0      GGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGC 1620
consensus_13275#1      GGGGCCGGTGAGCCTGCTGCATTGGTCCGGATCCGGCAAGCCGTGGGCGCGGCTCGGCGC 329
                       ************************************************************

consensus_13275#0      CGGGCGGCCGTGCCCGCTCGACGCGCTCTGGGCGCCGTTCGACCTGTACGGCCCGGCCGA 1680
consensus_13275#1      CGGGCGGCCGTGCCCGCTCGACGCGCTTTGGGCGCCGTTCGACCTGTACGGCCCGGCCGA 389
                       *************************** ********************************

consensus_13275#0      CTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTCTTTTCCTTCTTTCG 1740
consensus_13275#1      CTCCGCCGCGGAAGGGTCCCGGTAACCGCAACACTAAAGATGATTTTTTTCCTTCTTTCG 449
                       ********************************************* **************

consensus_13275#0      CCGACCCCGTACAAATTTCTGAGTTCTCAATTCTTCTCCACCATTACCTGTTCAAACACC 1800
consensus_13275#1      CCGACCCCGTACAAATTTTTGAGTTTTCAATTTTTTTCCCCCATTACCTGTTCAAACCCC 509
                       ****************** ****** ****** ** *** ***************** **

consensus_13275#0      TACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATGCCTTGT 1860
consensus_13275#1      TACATGTTTATTTTTTCTTCATTTCTTCTTTCTTTTGTTCTGTTCGATTAAATCCCTTGT 569
                       ***************************************************** ******

consensus_13275#0      GTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCACTTTTTTTGATCGTTTTGTT 1920
consensus_13275#1      GTTAGATTGTTCTTGTTGGTATTAGTGATCTCTTCTTCCCCTTTTTTTGATCGTTTTGTT 629
                       *************************************** ********************

consensus_13275#0      ACTAAAAAAAGAGGTCATTTGTATCCTACTCTACAGGTTTGGAAGGCTTGCAGCCTCAGC 1980
consensus_13275#1      ACTAAAAAAAGAGGTCATTTGTTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG--- 686
                       ********************** *****    * *       **       *        

consensus_13275#0      ATCATCATAAATAAAAAGCACAGAAAAATAGACATTGCAGCAGCATGTGTTCTTCTTCAA 2040
consensus_13275#1      ------------------------------------------------------------
                                                                                   

consensus_13275#0      AAAAAA 2046
consensus_13275#1      ------