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Oryza sativa
cluster # 1328 cluster # 1328       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1328#0 length = 1042 sequences # 2  

consensusID : consensus_1328#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1042
fasta sequence
                              [CATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGCTGGTTTTGTTCCTGGGGTCCTGGATGTTGACCTCATCAATGAAACTGTACAAGTTTCAAGTGATGAAGCTATCGAGATGGCAAAGGCTCTTGCATTGAAAGAAGGGTTGCTGGTTGGAATATCTTCAGGTGCAGCTGCAGCAGCAGCTGTTAGGCTCGCTCAGAGGCCGGAAAATGAAGGAAAACTTTTTGTTGTTGTCTTCCCAAGCTTTGGTGAGCGGTACCTTTCGTCGGTGCTCTTCCAGTCCATNCAGAAAGAAGCTGAAAACATGGTGGTTGAATGAAATGCACAATATCCGGGAAATCACAGGAATAAAAGTTTGGTATCTCTGCTTGTGTGATTAAACATACATTGTCCTGCCATTTTCAAGTTGTTCTGCTTGTGTAGCAATGGGGAACACAGTGTGTTAGCCTTGTAGTGTTAAACAGTTTACATTTTATCTTCCCTGTATATCAGAACCCTTTACATGGGCATTTGTCAGCCAGTGTGAATGAAATAAAGCATCATATG]

[+] EMBL CB644593             [CATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGCTGGTTTTGTTCCTGGGGTCCTGGATGTTGACCTCATCAATGAAACTGTACAAGTTTCAAGTGATGAAGCTATCGAGATGGCAAAGGCTCTTGCATTGAAAGAAGGGTTGCTGGTTGGAATATCTTCAGGTGCAGCTGCAGCAGCAGCTGTTAGGCTCGCTCAGAGGCCGGAAAATGAAGGAAAACTTTTTGTTGTTGTCTTCCCAAGCTTTGGTGAGCGGTACCTTTCGTCGGTGCTCTTCCAGTCCATNCAGAAAGAAGCTGAAAACATGGTGGTTGAATGAAATGCACAATATCCGGGAAATCACAGGA                                                                                                                                                                                                       ]
[-] EMBL CB644594             [                                                                                                                                                                                                                                                                                                                        AGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCNTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGCTGGTTTTGTTCCTGGGGTCCTGGATGTTGACCTCATCAATGAAACTGTACAAGTTTCAAGTGATGAAGCTATCGAGATGGCAAAGGCTCTTGCATTGAAAGAAGGGTTGCTGGTTGGAATATCTTCAGGTGCAGCTGCAGCAGCAGCTGTTAGGCTCGCTCAGAGGCCGGAAAATGAAGGAAAACTTTTTGTTGTTGTCTTCCCAAGCTTTGGTGAGCGGTACCTTTCGTCGGTGCTCTTCCAGTCCATCAAGAAGGAAGCTGAAAACATGGTGGTTGAATGAAATGCACAATATCCGGGAATCCACAGGAATAAAAGTTTGGTATCTCTGCTTGTGTGATTAAACATACATTGTCCTGCCATTTTCAAGTTGTTCTGCTTGTGTAGCAATGGGGAACACAGTGTGTTAGCCTTGTAGTGTTAAACAGTTTACATTTTATCTTCCCTGTATATCAGAACCCTTTACATGGGCATTTGTCAGCCAGTGTGAATGAAATAAAGCATCATATG]


>consensus_1328#0 CATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTG AAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGAT AACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCAT TTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCATGATAACTCG ACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTT CGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATT CCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATT ACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTC TGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGCTGGTTTTG TTCCTGGGGTCCTGGATGTTGACCTCATCAATGAAACTGTACAAGTTTCAAGTGATGAAG CTATCGAGATGGCAAAGGCTCTTGCATTGAAAGAAGGGTTGCTGGTTGGAATATCTTCAG GTGCAGCTGCAGCAGCAGCTGTTAGGCTCGCTCAGAGGCCGGAAAATGAAGGAAAACTTT TTGTTGTTGTCTTCCCAAGCTTTGGTGAGCGGTACCTTTCGTCGGTGCTCTTCCAGTCCA TNCAGAAAGAAGCTGAAAACATGGTGGTTGAATGAAATGCACAATATCCGGGAAATCACA GGAATAAAAGTTTGGTATCTCTGCTTGTGTGATTAAACATACATTGTCCTGCCATTTTCA AGTTGTTCTGCTTGTGTAGCAATGGGGAACACAGTGTGTTAGCCTTGTAGTGTTAAACAG TTTACATTTTATCTTCCCTGTATATCAGAACCCTTTACATGGGCATTTGTCAGCCAGTGT GAATGAAATAAAGCATCATATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)