|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13292#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1725 fasta sequence
[CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGACTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAGGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGGCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCTTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTTATAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAACCAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATTAACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGTAGAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTTGCCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTTGGGTTGTTCTCATAAATTGGTTCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGGTATCTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCTGTAAAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAACTTACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTTGCTAGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTCATCTTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATGTGATTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA]
[+] EMBL CF312491 [CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTG ]
[+] EMBL CF337421 [ ACTCCTGTCTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGT GAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTG ]
[+] EMBL AK111402 [ TGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGACTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAGGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGGCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCTTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTTATAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAACCAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATTAACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGTAGAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTTGCCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTTGGGTTGTTCTCATAAATTGGTTCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGGTATCTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCTGTAAAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAACTTACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTTGCTAGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTCATCTTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATGTGATTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA]
[-] EMBL CF312490 [ TTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGACTCTTGAACTACTATAAGTTATTTAGATAATCATGAAAAGATACATGTCTGATTAATCAGGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAGGCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCCTTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGTATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAAaaaaa ]
consensusID : consensus_13292#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1253 fasta sequence
[CTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC-GGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG-AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA-AGACA-GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA-ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC-TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAAGAGAAAAAAACCGTGCGGGGAAGAGCGATCTGGGTGGGAATCGGAGTTGGAAAACAAAATCGCTACGGATGCGATTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGCTAAAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA]
[+] EMBL AK068024 [CTGTTTCCCCCAATTCCTTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC GGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAAGAGAAAAAAA ]
[+] EMBL OSS1864A [ TTCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAG TCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC GGTAATCACTGGATCTNGGGTCTCCGCGGCTGGATG CCTCTCCTGCTTCGTCGTTGCGGTNGNAAT AACAGATTTGGGGCCTNTNCG CTGGATT NGTTAATGGG AGTTTT GAGCAAG ]
[+] EMBL AK060062 [ CCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCCCCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGGCGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGC GGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGT ]
[+] EMBL CF305390 [ GGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGGCCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGTCCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCATCTGGTAATCACTGGATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACCAGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGG AGTTTTGGAGCGAGGATGGAGGTGTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCG ]
[+] EMBL AU097081 [ ATCCGTTTGATGGGAATTTTTGAACCGAGGATGGAAGTTTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCNACGGGTTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGTTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGAaaaaaa ]
[+] EMBL BI810194 [ GAGCGAGGATGGAGGTGT TTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACGGGGTT CA GCAGCATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGTGCGAAATTGGATCCCAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCACAGACACGGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACACATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCAC AGAACGAATTTTATTTGTGGTACCCGTTTTGTTTGTATATATAGGAGGATAGGATGTAaaaaaaaaa ]
[+] EMBL OS0990A [ ATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTCAGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGTGGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGATCCAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAG TCTTAGAATGTCTTTTTGATCANA CACAAGACCGAATTTTATTTGTG ]
[-] EMBL CF317962 [ CAAGAGTGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAGCATGTGTGATGGAGCTGTGCATTTATATTGTGATAGGAACTCAGAAACTTCAACTACCA AGACA GGAGATCAAGATGTCTAGAATGGCATTGTGAATTTGTGATCCTCAATACA ATTGAAGTTGTTCACGGAGCTGCTCTTGGCACGATGGCTTCTTTGGTGATGGAGCAGAGCTCTTAGAATGTC TTTTGATCACACCACAAGAACGAATTTTATTTGTGGTACCAGTTTTGTTTGTATATATAGGAGGATAGGATGTATGCAGCGTTCTTGTGGTGTTCGGATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTTGGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAAGAGAAAAAAACCGTGCGGGGAAGAGCGATCTGGGTGGGAATCGGAGTTGGAAAACAAAATCGCTACGGATGCGATTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGCTAAAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13292#0 CATGGACTGAGGGAGTAGAAAATGTCCTGTACTCATGTACTCCTGTTTCCCCCAATTCCT 60
consensus_13292#1 ------------------------------------------CTGTTTCCCCCAATTCCT 18
******************
consensus_13292#0 TCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCC 120
consensus_13292#1 TCCCACCACCGGCCACCTCTAGCGTATCGCCTGGTCCTTCCATGCCATGCCTGCTGGTCC 78
************************************************************
consensus_13292#0 CCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGG 180
consensus_13292#1 CCCAACCCCCCATCTCCAAGCTCTTTCTCTCCCTGCTGGCTCCCCATCTTCACCTCGTGG 138
************************************************************
consensus_13292#0 CGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGG 240
consensus_13292#1 CGGCATCTGGTCATGCACCTCGGCCACAGCGCAGCTCGAGCAGTCGACGGGGTGGAGTGG 198
************************************************************
consensus_13292#0 CCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGT 300
consensus_13292#1 CCTCGGCAGCGGCACGGATTGGACTCGGCGACGGTGGTATACTTCCGGTCAGTCTCTCGT 258
************************************************************
consensus_13292#0 CCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTG 360
consensus_13292#1 CCGGATCTACTTCCGACAAGCCTCTCGTCCGGATCTAGGGCCTTGCAGCGGTAATCACTG 318
************************************************************
consensus_13292#0 GATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACC 420
consensus_13292#1 GATCTGGGGTCTCCGCGGCTGGATGCCCTCTCCTGCTTCGTCGTTGCGGTGGCAATCACC 378
************************************************************
consensus_13292#0 AGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGT 480
consensus_13292#1 AGATCTGGGGCCTCTGCGCCTGGATTCGGTTGATGGGAGTTTTGGAGCGAGGATGGAGGT 438
************************************************************
consensus_13292#0 GTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACG 540
consensus_13292#1 GTGTTTGAGAATAATCACCCCTCGTCTGCTGACTCGTCCCCATCGCCCGACCGGTCCACG 498
************************************************************
consensus_13292#0 GGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTC 600
consensus_13292#1 GGGTTCCAGGCAACATGCATCGCGGCGTCTCGGCATGGAGGGTGCACAGTGTTGGGGTTC 558
************************************************************
consensus_13292#0 AGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGT 660
consensus_13292#1 AGCTACGGCAGCTTCGTGGTGTTCGTTGCCTGCTGTGGGGTGCTTTGTGTTGTGGATAGT 618
************************************************************
consensus_13292#0 GGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGTAAGCTCTACGGA 720
consensus_13292#1 GGGCGTGGACCAGAAGCTGATTATGTGTTTTCACCGCGCGAAATTGGA----TCCAAGAG 674
*********************************************** ** * *
consensus_13292#0 CTCTTGAACTACTATAAGTTATTTAG-ATAATCATGAAAAGATACATGTCTGATTAATCA 779
consensus_13292#1 TGGGGATGGTGATGCAGATGGCGTGGTACCAGCATCAAG-----CATGTGTGAT------ 723
* * * * * * * * *** ** ***** ****
consensus_13292#0 GGTAGTCAATTATCTATTTCTTTGAGGTGATACATAGAAGCATGTCTCTTACACCTTGAG 839
consensus_13292#1 -GGAGCTGTGCATTTATAT-TGTGATAGGA-ACTCAGAAAC------TTCAACTACCAAG 774
* ** ** *** * * *** ** ** **** * * * **
consensus_13292#0 GCATACTGCTCTCACATTCATTCTCTTGGTACGCCAATAGTTCTACTAAGAAATGCTTCC 899
consensus_13292#1 ACAGG--------AGATCAAGATGTCTAG------AATGGCATTGTGAATTTGTGAT-CC 819
** * ** * * * *** * * ** ** * **
consensus_13292#0 TTAGCTCATATCCATCCTGTATATGCATTTATTTATGTAAGCGAACAAGGTTAGCACTGT 959
consensus_13292#1 TCAATACA-ATTGAAGTTGTTCACGGAGCTGCTCTTG-----GCACGATG-----GCTTC 868
* * ** ** * *** * * * * * ** * ** * * **
consensus_13292#0 ATGTGTAAAAAGGTAGTAGCATTTAAATAGTCAATGCTAAGTGTCACGATACTTGCCTTT 1019
consensus_13292#1 TTTGGTGATGGAGCAG-AGCTCTTAGAATGTCTTTTGATCACACCACAAGAACGAATTTT 927
* ** * * ** *** *** * *** * *** * * ***
consensus_13292#0 ATAATTGGTAACTGCAATTCTTCATCTTTCCATTTGCGCATGAAGAGGGACACAAGATAA 1079
consensus_13292#1 ATTTGTGGTA---CCAGTTTTGTTTGTATATATAGGAGGAT-AGGATGTATGCAGCGTTC 983
** ***** ** ** * * * * ** * * ** * ** * * ** *
consensus_13292#0 CCAGATAGTTCGCTAAGAAAAATTTAATTGTTAATTAATTTTGTTTTAGGGAAATAAATT 1139
consensus_13292#1 TTGTGGTGTTCG------GATGTAAAATTGGGGGTTCTTTTGGTGTTCGGAGAGCGATTT 1037
***** * * ***** ** *** ** ** ** * * **
consensus_13292#0 AACTGGTTGTACAATGGAGTTTAAAAGAAAGTTTACCCGTTGTTAATTGGAACATTTGGT 1199
consensus_13292#1 ----GGGTGGGAATCGGAGTCGGAAAAAAAATTGCTACGGATGCGATCTGAGAAA--GAG 1091
** ** * ***** *** *** ** ** ** ** * *
consensus_13292#0 AGAATTATTTGACGCCATAGGTTGATATCCTCGTTCCATCTTGACCCAAGGCATGCTTTT 1259
consensus_13292#1 AAAAAAACCGTGCGGGGAAGAGCGAT--CTGGGTGGGAATCGGAGTTGGAAAACAAAATC 1149
* ** * ** ** *** * ** * ** * *
consensus_13292#0 GCCATTGCTTTTGGCAAGTGTTTGGCAATCCATAGTAGTTTTTTGACATATCTTGCATTT 1319
consensus_13292#1 GCTACGGAT----GCGA---TTTGAGAAAAAAAAACTTTGCGAGAAAAAAACCTGCGCTA 1202
** * * * ** * **** ** * * * * * * * *** *
consensus_13292#0 GGGTTGTTCTCATAAATTGGT--TCAAGCGGAGTCGGGTCTAATATATAGACGTTTCTGG 1377
consensus_13292#1 AAAAAACCGTATGCTATTGGGAGTCGGAAAAAAAAACATGCGAAAAAAAAA--------- 1253
* ***** ** * * * * * * *
consensus_13292#0 TATCTTGGTCCAATACGATCAAAATGAAAAATTTATAGAATTCTATTGGCATAAGAATCT 1437
consensus_13292#1 ------------------------------------------------------------
consensus_13292#0 GTAAAAGCTAACTGTTAGGATAGAAAAAAATCATGGCCATGATGAGCAAATGGAAGAGAA 1497
consensus_13292#1 ------------------------------------------------------------
consensus_13292#0 CTTACCAATCTGCATTTTGAAATTTTGTAGTCAATCCCAGGCCAATTACAAACTGACTTT 1557
consensus_13292#1 ------------------------------------------------------------
consensus_13292#0 GCTAGCCGTTCAGTGTCGAGCTTTTGACGAAAGTTTGGGTGTTGTCCAAAATTGGTAGTC 1617
consensus_13292#1 ------------------------------------------------------------
consensus_13292#0 ATCTTTGTATATAATTGTGCAAAAATGATATACAACATGAGGCAAAGGGGATAATACATG 1677
consensus_13292#1 ------------------------------------------------------------
consensus_13292#0 TGATTATAAAGGCATACTCAAAATTGCAAAACGGAATAATACACGTGA 1725
consensus_13292#1 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||