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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13310#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1713 fasta sequence
[GCCTCAAAACCAACCGCGTCCGTCCCCGGCGTCAAAACCATGTGCCCCCCCGCCCCATTCCTACGTGCTGCCGCGCGCCACATATTAATCAGCCGCACACCGTTGCCCGCCTACCACTACTACCACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAAGCGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGGCGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTGCTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTCGCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTCGTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAGAACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTGCCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTCGCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGCGGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCCAAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCCATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACG-AGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGGACGG-AGCAAACGGGCGGCTCGCGGTCACCGTCG-AGGCGCTCG-AGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTGTTACTTGATCAATCTAATTTGGGTTAATGATTAGTATAAAAGANAAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK061220 [GCCTCAAAACCAACCGCGTCCGTCCCCGGCGTCAAAACCATGTGCCCCCCCGCCCCATTCCTACGTGCTGCCGCGCGCCACATATTAATCAGCCGCACACCGTTGCCCGCCTACCACTACTACCACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAAGCGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACATTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGGCGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTGCTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTCGCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTCGTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAGAACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTGCCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTCGCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGCGGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCCAAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCCATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACG AGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGGACGG AGCAAACGGGCGGCTCGCGGTCACCGTCG AGGCGCTCG AGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTG ]
[+] EMBL CB640866 [ TCAAAACCGACCGCGTCCGTCCCCGGCGTCAAAACCATGTGCCCCCCCGCCCCATTCCTACGTGCTGCCGCGCGCCACATATTAATCAGCCGCACACCGTTGCCCGCCTACCACTACTACCACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAAGCGGATCATGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAa ]
[+] EMBL CB638820 [ AACCGCGTCCGTCCCCGGCGTCAAAACCATGTGCCCCCCCGCCCCATTCCTACGTGCTGCCGCGCGCCACATATTAATCAGCCGCACACCGTTGCCCGCCTACCACTACTACCACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAAGCGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAAGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGG ]
[+] EMBL AK061493 [ ACCACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAAGCGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGGCGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTGCTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTCGCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTCGTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAGAACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTGCCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTCGCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGCGGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCCAAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCCATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACG AGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGGACGG AGCAAACGGGCGGCTCGCGGTCACCGTCG AGGCGCTCG AGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTG ]
[+] EMBL AK100881 [ CACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAAGCGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGGCGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTGCTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTCGCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTCGTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAGAACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTGCCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTCGCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGCGGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCCAAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCCATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACG AGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGGACGG AGCAAACGGGCGGCTCGCGGTCACCGTCG AGGCGCTCG AGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTG ]
[-] EMBL CB638821 [ GGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACG AGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGGACGG AGCAAACGGGCGGCTCGCGGTCACCGTCG AGGCGCTCG AGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTGTTACTTGATCAATCTAATTTGGGTTAAT ]
[+] EMBL C98911 [ GATCGCTGGGTTACAGCGCCACGAAGAGGG AANGGTGGAA CTGANGTTGGAGGCGACGGCGGACGGAAGCAAACGGGCGGCTCGCGGTCACCGTCGAAGGCGCTCGAAGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCNACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCNGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTGTTACTTGATCAATCTAATTTGGGTTAATGATTAGTATAAAA ]
[+] EMBL AU071257 [ AAACGGGCGGCTCGCGGTCACCGTCG AGGCGCTCG AGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCACGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCTCGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGCCACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTGTTACTTGATCAATCTAATTTGGGTTAAAAAAAAAAAAAAAAGANAAA ]
[+] EMBL CF328668 [ TAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTGTTACTTGATCAATCTAATTTGGGTTAATGATTAGTATAATTGATTATGGCAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_13310#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1222 fasta sequence
[CGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGGCGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTGCTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTCGCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTCGTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAGAACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTGCCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTCGCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGCGGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCCAAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCCATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACGAGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTG]
[+] EMBL AK119760 [CGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGGCAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCGATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGGCGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTGCTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTCGCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTCGTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAGAACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTGCCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTCGCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGCGGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCCAAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCCATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCACGAGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGTCCGTTCAGCGCGACGTGAAATCTGTAGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGTGTAAATACAAAAGTTTTG]
[+] EMBL C98910 [ AGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGACGCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCGGAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACNTCCCCTGTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCG CATGTCG CCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGACCTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCCGGCGGCCAACGTCATCCAGAAGCTTGAAGCCGTTGGGCGATCGCTNGGTTA AACGCCACGAGAGGGAAA GGTTGAA CTTAAGTTGa ]
consensusID : consensus_13310#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 184 fasta sequence
[ATGGATTGAAGGAGTAAAAAGAAATTTGTAGGATGTATTAGCTTTAGTTTTTTTGCTCGCGGTTATGTCCAGGCCAAATCGAAAAATGTGTAAATACAAAAGTTTTGTTACTTGATCAATTTAATTTGGGTTAATGATTAGTATAATTGATTAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF328667 [ATGGATTGAAGGAGTAAAAAGAAATTTGTAGGATGTATTAGCTTTAGTTTTTTTGCTCGCGGTTATGTCCAGGCCAAATCGAAAAATGTGTAAATACAAAAGTTTTGTTACTTGATCAATTTAATTTGGGTTAATGATTAGTATAATTGATTAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13310#0 GCCTCAAAACCAACCGCGTCCGTCCCCGGCGTCAAAACCATGTGCCCCCCCGCCCCATTC 60
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CTACGTGCTGCCGCGCGCCACATATTAATCAGCCGCACACCGTTGCCCGCCTACCACTAC 120
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 TACCACTGATCACACTTGCTACTACTACCACACATGGCGAGGAGAGCGCGGGAAGAGGAA 180
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GCGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGG 240
consensus_13310#1 -CGGATCAGGTGGAGAGGAAGCTGGTGCTGGGGCGGTACGAGCTCGGGAGGCTGCTGGGG 59
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCG 300
consensus_13310#1 CAGGGCACGTTCGCCAAGGTGTACTACGGCCGTGACCTCCGGTCCGGTGAGAGCGTGGCG 119
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 ATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGG 360
consensus_13310#1 ATCAAGGTGATCGACAAGGCGCGGCTCCGTCGCACGGAAGGGATGGTGGAGCAGCTGCGG 179
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTG 420
consensus_13310#1 CGTGAGATCTCCATCATGCGGATGGTGCGCCACCCCAACGTGGTGGGGATCCGCGAGGTG 239
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTC 480
consensus_13310#1 CTCGCCAGCCGCGCCCGCGTGTTCGTCGTCATGGAGTACGCCCGCGGCGGGGAGCTGTTC 299
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTC 540
consensus_13310#1 GCCAAGGTGGCGCGCGGGCGGCTCACCGAGGAGCACGCGAGGAGGTACTTCCAGCAGCTC 359
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAG 600
consensus_13310#1 GTCGCCGCCGTCGGGTTCTGCCACGGCCGCGGCGTCGCGCACCGGGACCTCAAGCCCGAG 419
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 AACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTG 660
consensus_13310#1 AACCTGCTGCTCGACGAGGAGGGGCGGCTCAAGGTCACCGACTTCGGCCTCGCCGCGCTG 479
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTC 720
consensus_13310#1 CCCGAGCAGCTGCGACAGGACGGCCTCCTCCACACGCAGTGCGGCACCCCGGCGTACGTC 539
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGC 780
consensus_13310#1 GCGCCCGAGGTGCTCCGGAAGCGCGGCTATGACGGCGCCCGCGCCGACCTCTGGTCCTGC 599
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCC 840
consensus_13310#1 GGCGTCGTGCTCTACGTGCTCCTCTGCGGCTTCCTCCCGTTCCAGCACGAGAACTACGCC 659
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 AAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGAC 900
consensus_13310#1 AAGATGTACCAGAAGATCTTCAAGGCGGAGTACCAGGTGCCGCCGTGGGTGTCCGGCGAC 719
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCG 960
consensus_13310#1 GCGCGCCGCCTCATCGTCCGCCTGCTCGTCGTCGACCCGGCCAAGCGCATCTCCATCCCG 779
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCT 1020
consensus_13310#1 GAGATCATGCGCACGCCATGGTTCAAGAAGGGCTTCGTGCCGCCCGTCCCCACCTCCCCT 839
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCC 1080
consensus_13310#1 GTCTCCCCCAAGAAATGGGAAGAAGACGATGTCCTCCTCGACGGCGGCGACTCCGGCGCC 899
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 ATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGAC 1140
consensus_13310#1 ATGTCGCCCCGGACGTGCAACGCGTTCCAGCTCATATCCTCCATGTCCTCCGGGTTCGAC 959
consensus_13310#2 ---ATGGATTGAAGGAGTAAAAAGA---AATTTGTAGGATGTATTAGCTTTAGTTTTTTT 54
* * * * * ** * * * ** * ** ** * **
consensus_13310#0 -CTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCC 1199
consensus_13310#1 -CTGTCGGGGATGTTCGAGAGCGAGCAGAAGGCCGCCACGGTGTTCACGTCGCGCGCGCC 1018
consensus_13310#2 GCTCGCGGTTATGTCC-AGGCCAAATCGAAAAATGTGTAAATACAAAAGTTTTGT-TACT 112
** *** **** * ** * * *** * * * ** * *
consensus_13310#0 GGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCAC 1259
consensus_13310#1 GGCGGCCACCGTCATCCAGAAGCTGGAGGCCGTGGGGCGATCGCTGGGTTACAGCGCCAC 1078
consensus_13310#2 --TGATCAATTTAATTTGG--GTTAATGAT--TAGTATAATTGATTAGG-GCAAAAAAAA 165
* ** * ** * * * * * * ** * * * ** *
consensus_13310#0 GAGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGGACGGAGCAAACGGGCGGCT 1319
consensus_13310#1 GAGAGGGAAAGGGTGGAAGCTGAGGTTGGAGGCGACGGCGTCCGT--TCAGC--GCGACG 1134
consensus_13310#2 AAAAAAAAAAAAAAAAAAA----------------------------------------- 184
* * *** **
consensus_13310#0 CGCGGTCACCGTCGAGGCGCTCGAGGTGGCCGCCGACGTCGCGGTGGTCGAGTTCGCGCA 1379
consensus_13310#1 TGAAATCTGTAG-GATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTAT---GTACAGGC- 1189
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CGACGCCGGCGACGAGCTCGAGTTCAACAAGTTCTGCGCCGTCGACGTGCGGCCGGGGCT 1439
consensus_13310#1 CAAATCGAGAGATGTG--TAAATACAA-AAGTTTTG------------------------ 1222
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CGCCGACATTGTCTGGGCGTGGCAGGGCGACCGGCCGGCGGCGCCCGACGTTGCCGCCGC 1499
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 CACCGTCGAGTGCTCGCCGGCGTGATCAGAGCCGTCCGTTCAGCGCGACGTGAAATCTGT 1559
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 AGGATGTATTAGCTTTAGCTTCTTTGCTCGCGGTTATGTACAGGCCAAATCGAGAGATGT 1619
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 GTAAATACAAAAGTTTTGTTACTTGATCAATCTAATTTGGGTTAATGATTAGTATAAAAG 1679
consensus_13310#1 ------------------------------------------------------------
consensus_13310#2 ------------------------------------------------------------
consensus_13310#0 ANAAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAA 1713
consensus_13310#1 ----------------------------------
consensus_13310#2 ----------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||