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Oryza sativa
cluster # 13312 cluster # 13312       Sequences # 12       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13312#0 length = 2206 sequences # 8  
consensus_13312#1 length = 1698 sequences # 2  
consensus_13312#2 length = 540 sequences # 1  
consensus_13312#3 length = 286 sequences # 1  

consensusID : consensus_13312#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2206
fasta sequence
                              [AAAAAGGCGAATAATTCCGCTGTTGCTTCGCTGCCTTTTGCCTTCTTCCTCATCCTCTCCANCACCACCGCCACCGGCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATCTCCCCCCGAGTCCCCAGCGAGATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCGGCCGCCGAGGAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGGTGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGTGGTGGTGGATGGGGGCGAGCCGCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGCACCGCCAAGTGGCAGCTTGATGAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTGTTAGCTGGCAAAGATACTAGAGCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGTATCCTAGAGGTGGAGAAGTTCTTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTTAGCTGGGTTCGCTTGGATGAGGGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGAACTTATCAAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAG-CAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGA-CAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATG-CTGATATT-GGATCATGG-ACTATTACAATTCCTGATGAGG-CCAATGGCATCGAT-GAACAATCATTTGATGATCTGCCCAAGGTACCTTTGGTTAAGAG-CCCTAG-CTCTTCTGTATTAATGAATG-CCTTCCAATCAAAGAC-AAGAATG-AAGACAAAGAATGGAGCC-AAGAAGTTGG-CTGGAGCTGA-CCAACAGGATGTTGTGG-AAACTCTT-CCTCTGACAAATTCTCGCTCGTGCCAGGGGTTTGATGGG--TTGTTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGATGATGAGGATAACTGCAATAAGAAACTTTATGGTTGCCTTGGTGCATTCCGTCGGCTACTTCAGAGGTCTCAGTATCAAGTTCAATATGGACGTCCTATTCAGTTACTTATCCTAGCAATTGTTGTTTTACTAGTCTTAATTTATGCCATGAAGGCAATTTTGTGACTTTTTTGATCAACTAGTGTCTCACGATTGACTTGCACTTCTTCATCAGCAGTCTGTAAGGTGTATGACAATTCATAGCTGATGAAACTAAAAGGGGAAGTGGTATTGTTTCTCTAGCTAGTTGAATGCCAGTGACAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACCGGCAGATCAT-TT-CGTGTGCC--TTAAGCCCAGAGGAACTGAACAATCA-TCTTCATATACCA-GTTTTGCTGATGCTGCATCTGCAACATTTTAAACA-GTCTGGTGCAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTAACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACATTGGAGTAACTTTTACCACACGATTGGCTTGTAACCTGTAAATAACTACTGCTTCAAATGAGCACCTGTTCTTACAAATTTGATAATGTTGGGTGTCGGTCTGCACTGCAACATCCAAAAAACCTTTGTAAGTAAGCACATGTCAACAGCTTGAAATTCAACAGACTTCTGATAAAACGCACTGGTTCATGTTGCGTTAAAAAAGA]

[+] EMBL OSS14607A            [AAAAAGGCGAATAATTCCGCTGTTGCTTCGCTGCCTTTTGCCTTCTTCCTCATCCTCTCCANCACCACCGCCACCGGCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATCTCCCCCCGAGTCCCCAGCGAGATGNCCACGTCGTTCGACCGNTGGGAGAAGGACCCCTTCTTCCCGGCCGNCGAGNAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGNAGGTGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGGGCGGTGGAGACGGCGGNGGAACGTGGTGGTGGTGGATNGGGGCGAACCGCTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK100724             [                                GCCTTTTGCCTTCTTCCTCCTCCTCTCCACCACCACCGCCACCGGCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATCTCCCCCCGAGTCCCCAGCGAGATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCGGCCGCCGAGGAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGGTGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGTGGTGGTGGATGGGGGCGAGCCGCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGCACCGCCAAGTGGCAGCTTGATGAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTGTTAGCTGGCAAAGATACTAGAGCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGTATCCTAGAGGTGGAGAAGTTCTTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTTAGCTGGGTTCGCTTGGATGAGGGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGAACTTATCAAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAG CAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGA CAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATG CTGATATT GGATCATGG ACTATTACAATTCCTGATGAGG CCAATGGCATCGAT GAACAATCATTTGATGATCTGCCCAAGGTACCTTTGGTTAAGAG CCCTAG CTCTTCTGTATTAATGAATG CCTTCCAATCAAAGAC AAGAATG AAGACAAAGAATGGAGCC AAGAAGTTGG CTGGAGCTGA CCAACAGGATGTTGTGG AAACTCTT CCTCTGACAAATTCTCGCTCGTGCCAGGGGTTTGATGGG  TTGTTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGATGATGAGGATAACTGCAATAAGAAACTTTATGGTTGCCTTGGTGCATTCCGTCGGCTACTTCAGAGGTCTCAGTATCAAGTTCAATATGGACGTCCTATTCAGTTACTTATCCTAGCAATTGTTGTTTTACTAGTCTTAATTTATGCCATGAAGGCAATTTTGTGACTTTTTTGATCAACTAGTGTCTCACGATTGACTTGCACTTCTTCATCAGCAGTCTGTAAGGTGTATGACAATTCATAGCTGATGAAACTAAAAGGGGAAGTGGTATTGTTTCTCTAGCTAGTTGAATGCCAGTGACAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACCGGCAGATCAT TT CGTGTGCC  TTAAGCCCAGAGGAACTGAACAATCA TCTTCATATACCA GTTTTGCTGATGCTGCATCTGCAACATTTTAAACA GTCTGGTGCAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTAACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACATTGGAGTAACTTTTACCACACGATTGGCTTGTAACCTGTAAATAACTACTGCTTCAAATGAGCACCTGTTCTTACAAATTTGATAATGTTGGGTGTCGGTCTGCACTGCAACATCCAAAAAACCTTTGTAAGTAAGCACATGTCAACAGCTTGAAATTCAA                                             ]
[+] EMBL CB662258             [                                                                            GCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATCTCCCCCCGAGTCCCCAGCGAGATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCGGCCGCCGAGGAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGGTGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGTGGTGGTGGATGGGGGCGAGCCGCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGCACCGCCAAGTGGCAGCTTGATGAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTGTTAGCTGGCAAAGATACTAGAGCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGTATCCTAGAGGTGGAGAAGTTCTTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTTAGCTGGGTTCGCTTGGATGAGGGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGAACTTATCAAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAG CAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGA CAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATG CTGATATT GGATCATGG ACTATTACAATTCCTGATGAGG CCAATGGCATCGATNGAAC ATCATTTGATGATCTGCCCAAGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB662259             [                                                                            GCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATCTCCCCCCGAGTCCCCAGCGAGATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCGGCCGCCGAGGAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGGTGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGTGGTGGTGGATGGGGGCGAGCCGCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGCACCGCCAAGTGGCAGCTTGATGAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTGTTAGCTGGCAAAGATACTAGAGCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGTATCCTAGAGGTGGAGAAGTTCTTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTTAGCTGGGTTCGCTTGGATGAGGGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGAACTTATCAAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAG CAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGA CAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATG CTGATATT GGATCATGG ACTATTACAATTCCTGATGAGG GCCATGGCATCGAT GAACAATCATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF323388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAG CAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGA CAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATG CTGATATT GGATCATGG ACTATTACAATTCCTGATGAGG CCAATGGCATCGAT GAACAATCATTTGATGATCTGCCCAAGGTACCTTTGGTTAAGAG CCCTAG CTCTTCTGTATTAATGAATG CCTTCCAATCAAAGAC AAGAATG AAGACAAAGAATGGAGCC AAGAAGTTGG CTGGAGCTGA CCAACA GATGTTGTGG AAACTCTT CCTCTGACAAATTCTCGCTCG GCCAGGGGTTTGATGGGGTTTGTTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGATGATGAGGATAACTGCAATAAGAAACTTTATGGTTGCCTTGGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU225700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gccgctATTCTTCGGGCTCAGACAGAGTCAGGTTTAGTGTC ACTAAGGAGGAGACCAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATGCCTGATATTGGGATCATGGAACTATTACATTCCCTGATGAGGACCAATGGCATCGAT GAACCATCATTTGATGATCTGCCCAAGGTACCTTTGGTTAAGAGACCCTAGACTCTTCTGTATTAATGAATGCCCTTCCAATCAAAGACAAAGAATGAAAGACAAAGAATGGAGCCAAAGAAGTTGGTCTGGAGCTGACCCAACAGGATGTAGTGGAAAACTCTTCCCTCTGAC AATTCTCGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB680766             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATGCCAGTGACAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACCGGCAGATCAT TT CGTGTGCC  TTAAGCCCAGAGGAACTGAACAATCA TCTTCATATACCA GTTTTGCTGATGCTGCATCTGCAACATTTTAAACA GTCTGGTGCAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTAACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACATTGGAGTAACTTTTACCACACGATTGGCTTGTAACCTGTAAATAACTACTGCTTCAAATGAGCACCTGTTCTTACAAATTTGATAATGTTGGGTGTCGGTCTGCACTGCAACATCCAAAAAACCTTTGTAAGTAAGCACATGTCAACAGCTTGAAATTCAACAGACTTCTGATAAAACGCACTGGTTCATGTTGCGTTAAAAAAGA]
[+] EMBL BI805257             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cagaGGAACTGAACATCATCTTGCATATACCAGTTTAGCCCAGAGGAACTGAACAATCAGTCTTCATATACCACGTTTTGCTGATGCTGCATCTGCAACATTTTAAACACGTCTGGT CAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTAC ACTGGCCAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGGAAATTCATCTATTAACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACATTGGAGTAACTTTTACCACACGATTGGCTTGTAACCTGTAAATAACTACTGCTTCAAATGAGCACCTGTTCTTACAAAaaaaaaa                                                                                                                         ]


>consensus_13312#0 AAAAAGGCGAATAATTCCGCTGTTGCTTCGCTGCCTTTTGCCTTCTTCCTCATCCTCTCC ANCACCACCGCCACCGGCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATC TCCCCCCGAGTCCCCAGCGAGATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTC TTCCCGGCCGCCGAGGAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGG TGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGT GGTGGTGGATGGGGGCGAGCCGCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGC ACCGCCAAGTGGCAGCTTGATGAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTG TTAGCTGGCAAAGATACTAGAGCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGT ATCCTAGAGGTGGAGAAGTTCTTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTT AGCTGGGTTCGCTTGGATGAGGGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGA ACTTATCAAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGT AGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGC TCAGCAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGACAGCTCCAGGTCATAGGAGAACG GCAAGTGCCTATGCTGATATTGGATCATGGACTATTACAATTCCTGATGAGGCCAATGGC ATCGATGAACAATCATTTGATGATCTGCCCAAGGTACCTTTGGTTAAGAGCCCTAGCTCT TCTGTATTAATGAATGCCTTCCAATCAAAGACAAGAATGAAGACAAAGAATGGAGCCAAG AAGTTGGCTGGAGCTGACCAACAGGATGTTGTGGAAACTCTTCCTCTGACAAATTCTCGC TCGTGCCAGGGGTTTGATGGGTTGTTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGAT GATGAGGATAACTGCAATAAGAAACTTTATGGTTGCCTTGGTGCATTCCGTCGGCTACTT CAGAGGTCTCAGTATCAAGTTCAATATGGACGTCCTATTCAGTTACTTATCCTAGCAATT GTTGTTTTACTAGTCTTAATTTATGCCATGAAGGCAATTTTGTGACTTTTTTGATCAACT AGTGTCTCACGATTGACTTGCACTTCTTCATCAGCAGTCTGTAAGGTGTATGACAATTCA TAGCTGATGAAACTAAAAGGGGAAGTGGTATTGTTTCTCTAGCTAGTTGAATGCCAGTGA CAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGG CTATGAAGAAACAACCTGACATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAATC AGTGAAGGATTGATTGTATGGACCGGCAGATCATTTCGTGTGCCTTAAGCCCAGAGGAAC TGAACAATCATCTTCATATACCAGTTTTGCTGATGCTGCATCTGCAACATTTTAAACAGT CTGGTGCAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATG CTGATGCTACAACTGGCAAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATA ATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGG TGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGG AGAAGGCTGAAAATTCATCTATTAACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCT TGCAGCCTGTACAGATGGTTGTGTTTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAA AATTCTTCTGTTCTTAGACATTGGAGTAACTTTTACCACACGATTGGCTTGTAACCTGTA AATAACTACTGCTTCAAATGAGCACCTGTTCTTACAAATTTGATAATGTTGGGTGTCGGT CTGCACTGCAACATCCAAAAAACCTTTGTAAGTAAGCACATGTCAACAGCTTGAAATTCA ACAGACTTCTGATAAAACGCACTGGTTCATGTTGCGTTAAAAAAGA



consensusID : consensus_13312#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1698
fasta sequence
                              [TCCGACTTTCCGTTGCCCTCGTCTCCCCCTTCTCGCTCGCAATGGCGACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCCGCCGCCGAGGAGGTGCAGGGATCCGCCGACCGCATGGAGTCGGTGTACAGGATATGGGTGCAGGACAGGAGTGGGGGCGATTCGGAGGCGGCGGCGGCGGCGGCTGCTGCTGCCGTGGGTGGAGGAGGGCTCCCTGCCGGCGAGCTCCGCCGCGAGCTGCACACTGCGCTCGGCACCGCCAAGTGGCAGCTAGATGAATTGGAGCGGGCAATTAGATCAAACGACAAGGTTTTCTCAGCTGGAAAGGACACAAAAGCACGGCATGATGACTTTGTTGCGGCAATCGGTTGTCGCATACTTGAGGTTGAGAACAATTTGAAAGAATCCAATGTTGCAGAGGGAAGGGGTGCCCTAAGCTGGATTGATTTGGATGAGGATGAACGGAATGATCTTGCTACCTTCCTATCTGCAAGCTCTTTTCAACAGCGAGACAAAGTAGTTACAATTCCATCTGTTGGTGATATTGATGTGGGCAACAATGCAGCAATGGTTAAAAAGGATATGTATGCTGACAGCTCCAAGGATTCTGGCTCCGCTGAGTTGAGTTCAGCAAGAGTAAAGGAAGAAACGCATCGTGGGCACAGAAGGGCTGCTAGTGCCCATGCTGATATCGGGTCATGGACTATGTTATGTCCAAATGAGAGCGAGAGTTCTGCTGACCTACCATATGATGACAAGCACCAAGAACCTTTGCTGAAGATAGTGAAAACATGTGCACTGACGAGTGCCTTGCAATCTAAGCCTAGAACGAAGAAAAAAGGTGGAGCTGTGAAATGGGCCGCTGTTGATCAACAAGATGTGGAAGAGACAATCCCTCTCAGTTCTCAGATGGGTCAGGGATCGGATAGATGCTTTGAAAGAAGCAAGAGTTGTGTAAGTACTTGTGATGAGAGTACATACAATAAGAAACTTTATGGTTGTCTTGGAGCCCTGCATAGACGACTGCAGAGGTCGCGATATCGAATTCGGTATGGGCGTCCTGTTCAATTAATTGTGTTAGCAGTTGCTGCCCTCTTAATATTCATGTGTGTATTCAAGAAAATTTGGTGACCTTTTGATGGGCTCATGATTTCCATAGAAGCCTCACCACAGCAGCTTGCGAGGTTCTACCATTTTTGCCTGCATAGCTCATATAACTGGTGTTGAACAGGCATCTGAGGCATGAAGAATGATCAGACTGGAGCAGCTTATCGCATTGACTGTACAGAAGTGTGCTGCATCAGGATGTCATCGGAAATGCAGTGTGCTGCCTGCATGATGCACCTCAAGATCTTGATCCTCACCATGGCCTGTTGACATATGCAACACAGTGTAGGGCCCGCTTTGGAAAGTTGGAAGAGTGGTGGAATTTCCTTTGTGAAATATATCTTCTGAACCCCTCATTCATAGCTGGTTCCATGAGAATAGGTTCTGAAGTGAAATGTGTAAGATGCTAGAACAATTGCCACACAATCAGAAGCTAGCCCGGGCTATCCGGCTCTAGAATTAGAATTTTGATGCCTCTGGCATTACGTTTGTTAGGCTATTAATTAAAGGAGCTATAAGGGGTAGCTAAATGTATTGCGATGTTTGAAACTTCTGCACTGTTCGCGTGTTATATGAAAGACTAATC]

[+] EMBL AK071256             [TCCGACTTTCCGTTGCCCTCGTCTCCCCCTTCTCGCTCGCAATGGCGACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCCGCCGCCGAGGAGGTGCAGGGATCCGCCGACCGCATGGAGTCGGTGTACAGGATATGGGTGCAGGACAGGAGTGGGGGCGATTCGGAGGCGGCGGCGGCGGCGGCTGCTGCTGCCGTGGGTGGAGGAGGGCTCCCTGCCGGCGAGCTCCGCCGCGAGCTGCACACTGCGCTCGGCACCGCCAAGTGGCAGCTAGATGAATTGGAGCGGGCAATTAGATCAAACGACAAGGTTTTCTCAGCTGGAAAGGACACAAAAGCACGGCATGATGACTTTGTTGCGGCAATCGGTTGTCGCATACTTGAGGTTGAGAACAATTTGAAAGAATCCAATGTTGCAGAGGGAAGGGGTGCCCTAAGCTGGATTGATTTGGATGAGGATGAACGGAATGATCTTGCTACCTTCCTATCTGCAAGCTCTTTTCAACAGCGAGACAAAGTAGTTACAATTCCATCTGTTGGTGATATTGATGTGGGCAACAATGCAGCAATGGTTAAAAAGGATATGTATGCTGACAGCTCCAAGGATTCTGGCTCCGCTGAGTTGAGTTCAGCAAGAGTAAAGGAAGAAACGCATCGTGGGCACAGAAGGGCTGCTAGTGCCCATGCTGATATCGGGTCATGGACTATGTTATGTCCAAATGAGAGCGAGAGTTCTGCTGACCTACCATATGATGACAAGCACCAAGAACCTTTGCTGAAGATAGTGAAAACATGTGCACTGACGAGTGCCTTGCAATCTAAGCCTAGAACGAAGAAAAAAGGTGGAGCTGTGAAATGGGCCGCTGTTGATCAACAAGATGTGGAAGAGACAATCCCTCTCAGTTCTCAGATGGGTCAGGGATCGGATAGATGCTTTGAAAGAAGCAAGAGTTGTGTAAGTACTTGTGATGAGAGTACATACAATAAGAAACTTTATGGTTGTCTTGGAGCCCTGCATAGACGACTGCAGAGGTCGCGATATCGAATTCGGTATGGGCGTCCTGTTCAATTAATTGTGTTAGCAGTTGCTGCCCTCTTAATATTCATGTGTGTATTCAAGAAAATTTGGTGACCTTTTGATGGGCTCATGATTTCCATAGAAGCCTCACCACAGCAGCTTGCGAGGTTCTACCATTTTTGCCTGCATAGCTCATATAACTGGTGTTGAACAGGCATCTGAGGCATGAAGAATGATCAGACTGGAGCAGCTTATCGCATTGACTGTACAGAAGTGTGCTGCATCAGGATGTCATCGGAAATGCAGTGTGCTGCCTGCATGATGCACCTCAAGATCTTGATCCTCACCATGGCCTGTTGACATATGCAACACAGTGTAGGGCCCGCTTTGGAAAGTTGGAAGAGTGGTGGAATTTCCTTTGTGAAATATATCTTCTGAACCCCTCATTCATAGCTGGTTCCATGAGAATAGGTTCTGAAGTGAAATGTGTAAGATGCTAGAACAATTGCCACACAATCAGAAGCTAGCCCGGGCTATCCGGCTCTAGAATTAGAATTTTGATGCCTCTGGCATTACGTTTGTTAGGCTATTAATTAAAGGAGCTATAAGGGGTAGCTAAATGTATTGCGATGTTTGAAACTTCTGCACTGTTCGCGTGTTATATGAAAGACTAATC]
[+] EMBL CB096516             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGTGGATCTGTGAAATGGGCCGCTGTTGATC ACAAGATGTGGAAGAGACAATCCCTCTCAGTTCTCAGATGGGTCAGGGATCGGATAGATGCTTTGAGAGAAGCAAGAGTTGTGTAAGTACTTGTGATGAGAGTACATACAATAAGAAACTTTATGGTTGTCTTGGAGCCCTGCATAGACGACTGCAGAGGTCGCGATATCGAATTCGGTATGGGCGTCCTGTTCAATTAATTGTGTTAGCAGTTGCTGCCCTCTTAATATTCATGTGTGTATTCAAGAAAATTTGGTGACCTTTTGATGGGCTCATGATTTCCATAGAAGCCTCACCACAGCAGCTTGCGAGGTTCTACCATTTTTGCCTGCATAGCTCATATAACTGGTGTTGAACAGGCACCTGAGGCATGAAGAATGATCAGACTGGAGCAGCTTATCGCATTGACTGTACAGAAGTGTGCTGCATCAGGATGTCATCGGAAATGCAGTGTGCTGCCTGCATGATGCACCTCAAGATCTTGATCCTCACCATGGCCTGTTGACATATGCAACACCGTGTAGGGCCCGCTTT                                                                                                                                                                                                                                                                                               ]


>consensus_13312#1 TCCGACTTTCCGTTGCCCTCGTCTCCCCCTTCTCGCTCGCAATGGCGACGTCGTTCGACC GCTGGGAGAAGGACCCCTTCTTCCCCGCCGCCGAGGAGGTGCAGGGATCCGCCGACCGCA TGGAGTCGGTGTACAGGATATGGGTGCAGGACAGGAGTGGGGGCGATTCGGAGGCGGCGG CGGCGGCGGCTGCTGCTGCCGTGGGTGGAGGAGGGCTCCCTGCCGGCGAGCTCCGCCGCG AGCTGCACACTGCGCTCGGCACCGCCAAGTGGCAGCTAGATGAATTGGAGCGGGCAATTA GATCAAACGACAAGGTTTTCTCAGCTGGAAAGGACACAAAAGCACGGCATGATGACTTTG TTGCGGCAATCGGTTGTCGCATACTTGAGGTTGAGAACAATTTGAAAGAATCCAATGTTG CAGAGGGAAGGGGTGCCCTAAGCTGGATTGATTTGGATGAGGATGAACGGAATGATCTTG CTACCTTCCTATCTGCAAGCTCTTTTCAACAGCGAGACAAAGTAGTTACAATTCCATCTG TTGGTGATATTGATGTGGGCAACAATGCAGCAATGGTTAAAAAGGATATGTATGCTGACA GCTCCAAGGATTCTGGCTCCGCTGAGTTGAGTTCAGCAAGAGTAAAGGAAGAAACGCATC GTGGGCACAGAAGGGCTGCTAGTGCCCATGCTGATATCGGGTCATGGACTATGTTATGTC CAAATGAGAGCGAGAGTTCTGCTGACCTACCATATGATGACAAGCACCAAGAACCTTTGC TGAAGATAGTGAAAACATGTGCACTGACGAGTGCCTTGCAATCTAAGCCTAGAACGAAGA AAAAAGGTGGAGCTGTGAAATGGGCCGCTGTTGATCAACAAGATGTGGAAGAGACAATCC CTCTCAGTTCTCAGATGGGTCAGGGATCGGATAGATGCTTTGAAAGAAGCAAGAGTTGTG TAAGTACTTGTGATGAGAGTACATACAATAAGAAACTTTATGGTTGTCTTGGAGCCCTGC ATAGACGACTGCAGAGGTCGCGATATCGAATTCGGTATGGGCGTCCTGTTCAATTAATTG TGTTAGCAGTTGCTGCCCTCTTAATATTCATGTGTGTATTCAAGAAAATTTGGTGACCTT TTGATGGGCTCATGATTTCCATAGAAGCCTCACCACAGCAGCTTGCGAGGTTCTACCATT TTTGCCTGCATAGCTCATATAACTGGTGTTGAACAGGCATCTGAGGCATGAAGAATGATC AGACTGGAGCAGCTTATCGCATTGACTGTACAGAAGTGTGCTGCATCAGGATGTCATCGG AAATGCAGTGTGCTGCCTGCATGATGCACCTCAAGATCTTGATCCTCACCATGGCCTGTT GACATATGCAACACAGTGTAGGGCCCGCTTTGGAAAGTTGGAAGAGTGGTGGAATTTCCT TTGTGAAATATATCTTCTGAACCCCTCATTCATAGCTGGTTCCATGAGAATAGGTTCTGA AGTGAAATGTGTAAGATGCTAGAACAATTGCCACACAATCAGAAGCTAGCCCGGGCTATC CGGCTCTAGAATTAGAATTTTGATGCCTCTGGCATTACGTTTGTTAGGCTATTAATTAAA GGAGCTATAAGGGGTAGCTAAATGTATTGCGATGTTTGAAACTTCTGCACTGTTCGCGTG TTATATGAAAGACTAATC



consensusID : consensus_13312#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 540
fasta sequence
                              [GTTTCTCTAGCTAGTTGAATGCCAGTGACAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACCGGCAGATCATTTCGTGTGCCTTAAGCCCAGAGGAACTGAACAATCATCTTCATATACCAGTTTTGCTGATGCTGCATCTGCAACATTTTAAACAGTCTGGTGCAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU096644             [GTTTCTCTAGCTAGTTGAATGCCAGTGACAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACCGGCAGATCATTTCGTGTGCCTTAAGCCCAGAGGAACTGAACAATCATCTTCATATACCAGTTTTGCTGATGCTGCATCTGCAACATTTTAAACAGTCTGGTGCAGTACTGCAGCCTTGTTAACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13312#2 GTTTCTCTAGCTAGTTGAATGCCAGTGACAGTGAACACTGTTTTGTATGTTCGAAGGGAT TCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGGGAAGCACA ACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACCGGCAGATC ATTTCGTGTGCCTTAAGCCCAGAGGAACTGAACAATCATCTTCATATACCAGTTTTGCTG ATGCTGCATCTGCAACATTTTAAACAGTCTGGTGCAGTACTGCAGCCTTGTTAACCTGTG CAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAACAGTTTTGT GCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTGTATTCCAA TTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATTTGAGTACC TATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13312#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 286
fasta sequence
                              [GTGTCTAGGTGGCAATGAACTTGTGCGGAAGAATTTGAGTACCTATATGTGTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTAACACCAGTATCGCACAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACCTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACCTTGGAGTAACTTTTACCACCCGATTGGCTTGTAACCTGTAAATAAGGGCCTGTTTGGTACCAAAAAAAAAA]

[+] EMBL BI813478             [GTGTCTAGGTGGCAATGAACTTGTGCGGAAGAATTTGAGTACCTATATGTGTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTAACACCAGTATCGCACAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACCTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACCTTGGAGTAACTTTTACCACCCGATTGGCTTGTAACCTGTAAATAAGGGCCTGTTTGGTACCAAAAAAAAAA]


>consensus_13312#3 GTGTCTAGGTGGCAATGAACTTGTGCGGAAGAATTTGAGTACCTATATGTGTTGATGCTA TAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTAACACCAGTATCGCACAGAGCTGC AGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACCTAGAGGTGCAGT TTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACCTTGGAGTAACTTTTACCACCCGATT GGCTTGTAACCTGTAAATAAGGGCCTGTTTGGTACCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13312#0      AAAAAGGCGAATAATTCCGCTGTTGCTTCGCTGCCTTTTGCCTTCTTCCTCATCCTCTCC 60
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      ANCACCACCGCCACCGGCCGACGCATCTCCGATTCGATTTCGCCTTCCCACGAATCTATC 120
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      TCCCCCCGAGTCCCCAGCGAGATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTC 180
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      TTCCCGGCCGCCGAGGAGGTGCAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGG 240
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      TGGTTGCAGGAGAGGAAAGAAGTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGT 300
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      GGTGGTGGATGGGGGCGAGCCGCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGC 360
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      ACCGCCAAGTGGCAGCTTGATGAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTG 420
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      --------------------------TCCGACTTTCCGTTGCCCTCGTCTCCCCCTTCTC 34
                                                                                   

consensus_13312#0      TTAGCTGGCAAAGATACTAGAGCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGT 480
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GCTCGCAATGGCGACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCCGCCGCCGA 94
                                                                                   

consensus_13312#0      ATCCTAGAGGTGGAGAAGTTCTTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTT 540
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GGAGGTGCAGGGATCCGCCGACCGCATGGAGTCGGTGTACAGGATATGGGTGCAGGACAG 154
                                                                                   

consensus_13312#0      AGCTGGGTTCGCTTGGATGAGGGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGA 600
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GAGTGGGGGCGATTCGGAGGCGGCGGCGGCGGCGGCTGCTGCTGCCGTGGGTGGAGGAGG 214
                                                                                   

consensus_13312#0      ACTTATCAAAAACGTGATGAGGTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGT 660
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GCTCCCTGCCGGCGAGCTCCGCCGCGAGCTGCACACTGCGCTCGGCACCGCCAAGTGGCA 274
                                                                                   

consensus_13312#0      AGCAATGCAAGAAGGGTGAAAAAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGC 720
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GCTAGATGAATTGGAGCGGGCAATTAGATCAAACGACAAGGTTTTCTCAGCTGGAAAGGA 334
                                                                                   

consensus_13312#0      TCAGCAGAGTCAGGTTTAGTGTCAACTAAGGAGGAGACAGCTCCAGGTCATAGGAGAACG 780
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      CACAAAAGCACGGCATGATGACTTTGTTGCGGCAATCGGTTGTCGCATACTTGAGGTTGA 394
                                                                                   

consensus_13312#0      GCAAGTGCCTATGCTGATATTGGATCATGGACTATTACAATTCCTGATGAGGCCAATGGC 840
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GAACAATTTGAAAGAATCCAATGTTGCAGAGGGAAGGGGTGCCCTAAGCTGGATTGATTT 454
                                                                                   

consensus_13312#0      ATCGATGAACAATCATTTGATGATCTGCCCAAGGTACCTTTGGTTAAGAGCCCTAGCTCT 900
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GGATGAGGATGAACGGAATGATCTTGCTACCTTCCTATCTGCAAGCTCTTTTCAACAGCG 514
                                                                                   

consensus_13312#0      TCTGTATTAATGAATGCCTTCCAATCAAAGACAAGAATGAAGACAAAGAATGGAGCCAAG 960
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      AGACAAAGTAGTTACAATTCCATCTGTTGGTGATATTGATGTGGGCAACAATGCAGCAAT 574
                                                                                   

consensus_13312#0      AAGTTGGCTGGAGCTGACCAACAGGATGTTGTGGAAACTCTTCCTCTGACAAATTCTCGC 1020
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GGTTAAAAAGGATATGTATGCTGACAGCTCCAAGGATTCTGGCTCCGCTGAGTTGAGTTC 634
                                                                                   

consensus_13312#0      TCGTGCCAGGGGTTTGATGGGTTGTTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGAT 1080
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      AGCAAGAGTAAAGGAAGAAACGCATCGTGGGCACAGAAGGGCTGCTAGTGCCCATGCTGA 694
                                                                                   

consensus_13312#0      GATGAGGATAACTGCAATAAGAAACTTTATGGTTGCCTTGGTGCATTCCGTCGGCTACTT 1140
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      TATCGGGTCATGGACTATGTTATGTCCAAATGAGAGCGAGAGTTCTGCTGACCTACCATA 754
                                                                                   

consensus_13312#0      CAGAGGTCTCAGTATCAAGTTCAATATGGACGTCCTATTCAGTTACTTATCCTAGCAATT 1200
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      TGATGACAAGCACCAAGAACCTTTGCTGAAGATAGTGAAAACATGTGCACTGACGAGTGC 814
                                                                                   

consensus_13312#0      GTTGTTTTACTAGTCTTAATTTATGCCATGAAGGCAATTTTGTGACTTTTTTGATCAACT 1260
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      CTTGCAATCTAAGCCTAGAACGAAGAAAAAAGGTGGAGCTGTGAAATGGGCCGCTGTTGA 874
                                                                                   

consensus_13312#0      AGTGTCTCACGATTGACTTGCACTTCTTCATCAGCAGTCTGTAAGGTGTATGACAATTCA 1320
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      TCAACAAGATGTGGAAGAGACAATCCCTCTCAGTTCTCAGATGGGTCAGGGATCGGATAG 934
                                                                                   

consensus_13312#0      TAGCTGATGAAACTAAAAGGGGAAGTGGTATTGTTTCTCTAGCTAGTTGAATGCCAGTGA 1380
consensus_13312#2      --------------------------------GTTTCTCTAGCTAGTTGAATGCCAGTGA 28
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ATGCTTTGAAAGAAGCAAGAGTTGTGTAAGTACTTGTGATGAGAGTACATACAATAAGAA 994
                                                                                   

consensus_13312#0      CAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGG 1440
consensus_13312#2      CAGTGAACACTGTTTTGTATGTTCGAAGGGATTCTATCATAACTCGCAAGATTGTCTTGG 88
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ACTTTATGGTTGTCTTGGAGCCCTGCATAGACGACTGCAGAGGTCGCGATATCGAATTCG 1054
                                                                                   

consensus_13312#0      CTATGAAGAAACAACCTGAC--ATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAA 1498
consensus_13312#2      CTATGAAGAAACAACCTGAC--ATGGGAAGCACAACATTTAGCAACCCAATATAGCAAAA 146
consensus_13312#3      -----------------------------------------GTGTCTAGGTGGCAATGAA 19
consensus_13312#1      GTATGGGCGTCCTGTTCAATTAATTGTGTTAGCAGTTGCTGCCCTCTTAATATTCATGTG 1114
                                                                    *    *         

consensus_13312#0      TCAGTGAAGGATTGATTGTATGGACCGGCAGATCA--TTTCGTGTGCCTTAAGC------ 1550
consensus_13312#2      TCAGTGAAGGATTGATTGTATGGACCGGCAGATCA--TTTCGTGTGCCTTAAGC------ 198
consensus_13312#3      CTTGTGCGGAA--GAATTTGAGTACCTATATGTGT--TGATGCTATAGATTGGC------ 69
consensus_13312#1      TGTATTCAAGA--AAATTTGGTGACCTTTTGATGGGCTCATGATTTCCATAGAAGCCTCA 1172
                           *     *   * * *    ***      *    *   *       *          

consensus_13312#0      CCAGAGGAA-CTG-AACAATCATCTTCATATACCAGTTTTGC---------TGATGCTGC 1599
consensus_13312#2      CCAGAGGAA-CTG-AACAATCATCTTCATATACCAGTTTTGC---------TGATGCTGC 247
consensus_13312#3      TTGGAGAAGGCTG-AAAATTCATCTATTAACACCAGTATCGCA--------CAGAGCTGC 120
consensus_13312#1      CCACAGCAGCTTGCGAGGTTCTACCATTTTTGCCTGCATAGCTCATATAACTGGTGTTGA 1232
                           ** *   **  *   **  *        ** *  * **             * ** 

consensus_13312#0      ATCTGCAAC----------ATTTTAAACAGTCTGGTGCAGTACTGCAGCCTTGTTAACCT 1649
consensus_13312#2      ATCTGCAAC----------ATTTTAAACAGTCTGGTGCAGTACTGCAGCCTTGTTAACCT 297
consensus_13312#3      AGG-ACTAC----------AGGTCTTGCAGCCTGTACAGATGGTTGTGTTTTGTACACCT 169
consensus_13312#1      ACAGGCATCTGAGGCATGAAGAATGATCAGACTGGAGCAGC-TTATCGCATTGACTGTAC 1291
                       *    *  *          *       *** ***         *   *  ***       

consensus_13312#0      ----GTGCAATTCAGCAGTACAT----AGAGCTAGAATGCTGATGCTACAACTGGCAAAC 1701
consensus_13312#2      ----GTGCAATTCAGCAGTACAT----AGAGCTAGAATGCTGATGCTACAACTGGCAAAC 349
consensus_13312#3      AGAGGTGCAGTTTAGAAGAACAG----AAAAATT--CTTCTGTTCTTAGACCTTG-GAGT 222
consensus_13312#1      AGAAGTGTGCTGCATCAGGATGTCATCGGAAATGCAGTGTGCTGCCTGCATGATGCACCT 1351
                           ***   *  *  ** *         *  *    *        *  *    *     

consensus_13312#0      AACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTA 1761
consensus_13312#2      AACAGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTA 409
consensus_13312#3      AAC--TTTTAC-CACCCGATTG-GCTTGTAACCTG--TAAATAAG-GGCCTGTTTG-GTA 274
consensus_13312#1      CAAGATCTTGATCCTCACCATGGCCTGTTGACATATGCAACACAGTGTAGGGCCCGCTTT 1411
                        *   * **   *       **      *  * *    **   ** *           * 

consensus_13312#0      CTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCAT--GAACTTTGCGGAA 1819
consensus_13312#2      CTGTATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCAT--GAACTTTGCGGAA 467
consensus_13312#3      CCAAAAAAAAAA------------------------------------------------ 286
consensus_13312#1      GGAAAGTTGGAAGAGTGGTGGAATTTCCTTTGTGAAATATATCTTCTGAACCCCTCATTC 1471
                           *     *                                                 

consensus_13312#0      GAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATC 1879
consensus_13312#2      GAATTTGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAAAAAAAA 527
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ATAGCTGGTTCCATGAGAATAGGTTCTGAAGTGAAATGTGTAAGATGCTAGAACAATTGC 1531
                                                                                   

consensus_13312#0      TATTAACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGT 1939
consensus_13312#2      AAAAAAAAAAAAA----------------------------------------------- 540
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      CACACAATCAGAAGCTAGCCCGGGCTATCCGGCTCTAGAATTAGAATTTTGATGCCTCTG 1591
                                                                                   

consensus_13312#0      TGTGTTTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGAC 1999
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      GCATTACGTTTGTTAGGCTATTAATTAAAGGAGCTATAAGGGGTAGCTAAATGTATTGCG 1651
                                                                                   

consensus_13312#0      ATTGGAGTAACTTTTACCACACGATTGGCTTGTAACCTGTAAATAACTACTGCTTCAAAT 2059
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ATGTTTGAAACTTCTGCACTGTTCGCGTGTTATATGAAAGACTAATC------------- 1698
                                                                                   

consensus_13312#0      GAGCACCTGTTCTTACAAATTTGATAATGTTGGGTGTCGGTCTGCACTGCAACATCCAAA 2119
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      AAACCTTTGTAAGTAAGCACATGTCAACAGCTTGAAATTCAACAGACTTCTGATAAAACG 2179
consensus_13312#2      ------------------------------------------------------------
consensus_13312#3      ------------------------------------------------------------
consensus_13312#1      ------------------------------------------------------------
                                                                                   

consensus_13312#0      CACTGGTTCATGTTGCGTTAAAAAAGA 2206
consensus_13312#2      ---------------------------
consensus_13312#3      ---------------------------
consensus_13312#1      ---------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)