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Oryza sativa
cluster # 13319 cluster # 13319       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13319#0 length = 1768 sequences # 11  
consensus_13319#1 length = 1397 sequences # 1  

consensusID : consensus_13319#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1768
fasta sequence
                              [AGTTCC-CAAGCTCCTTTGCACTCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTACGATGGGGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGGCAGGCCGGTACG-GAGAATATACGAC-GGCGACGACGACGAAAACTACTACCGCAATGATGAAGTAGACTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGCGGCGCAGTCATGCCGGAGAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTG-CCTGACTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCC-CAACCGCTTCTCAGGTGAAATCCCTGCAGTCAATACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGGCAACGGCTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCCAGACGCTGGTCACTTTAGATATTGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTCATCTTTGAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTTATCACATCTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGATTCCCACATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGGATCATTAGATGGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGATAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTTGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACCGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACA-GCCATAATTCAGGG-CTCTGTGGCCCTCCGTTGAACA-TTTCA-TGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTT-TGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTG-ATCAGTATTTGTAGC-TGTGTG-TTTTCTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTC-ATAGGACCCCCAAC-AAACTTCCTT-TGTATCAAGACTAA-GATGTAAGAAGTTACTGCATCCATCCAAAATTATATGGAACATGTCCATCTTATATACTACCAACAAATACTGCTATGCTTG]

[+] EMBL CF276779             [AGTTCC CAAGCTCCTTTGCACTCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTACGATGGGGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGGCAGGCCGGTACG GAGAATATACGAC GGCGACGACGACGAAAACTACTACCGCAATGATGAAGTAGACTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGGGGCGCAGTCATGCCGGAGAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTGCCCTGACTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCC CAACCGCTTCTCAGGTGAAATCCCTGCAGTCAATACAAGCTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK066165             [   TCCACAAGCTCCTTTGCACTCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTACGATGGGGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGGCAGGCCGGTACG GAGAATATACGAC GGCGACGACGACGAAAACTACTACCGCAATGATGAAGTAGACTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGCGGCGCAGTCATGCCGGAGAAGTACAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCTTTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTG CCTGACTGCTGGTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCCACAACCGCTTCTCAGGTGAAATCCCTGCAGTCAATACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGGCAACGGCTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCCAGACGCTGGTCACTTTAGATATTGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTCATCTTTGAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTTATCACATCTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGATTCCCACATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGGATCATTAGATGGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGATAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTTGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACCGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACA GCCATAATTCAGGG CTCTGTGGCCCTCCGTTGAACA TTTCA TGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTT TGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTG ATCAGTATTTGTAGC TGTGTG TTTTCTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTC ATAGGACCCCCAAC AAACTTCCTT TGTATCAAGACTAA GATGTAAGAAGTTACTGCATCCATCCAAAATTATATGGAACATGTCCATCTTATATACTACCAACAAATGCTGCTATGCTTG]
[+] EMBL AU162021             [                      TCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTACGATGGGGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGGCANGCCGGTACG ANGAATATACGAC GGCGACGACGACGAAAACTACTACCGCAATGATGAAGTAGACTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGCGGCGCAGTCATGCCGGAGAAGTACAACGTCCTGAACGGC ACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGG TGC TTCTNTCCAGAT CTGGA CTGTC AAC ANAAG TCACCGGTAAnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C93647               [                      TCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGTGCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCAACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTANTACCATTACGATGGGGANGAAGACGATGACAACTANTANCATGATGACGANGACGATGTCTTCTCCGGCAGCCGGGTACGAGA AATATACGACNGGNGACGACGACGAAAACTACTnacg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB625167             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGTTAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTTGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACAGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACA GCCATAATTCAGGG CTCTGTGGCCCTCCGTTGAACA TTTCA TGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTT TGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTG ATCAGTATTTGTAGC TGTGTG TTTTTTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTC ATAGGACCCCCAAC AAACTTCCTT TGTAGCAAGACTAA GATGTAAGAAGTTACTGCATCCAAATAAAAaga                                                 ]
[+] EMBL BQ905922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCCATCAATATACACGCCATAATTCAGGGTCTCTGT GCCCTCCGTTGAACAGTTTCAGTGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTT GGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTA GCAGAAAGTCTCCTC G TGATAAATTTCTTTCAAGAGGAAATACTGTATCAGTA TTGTA C TG G G TTTTTTTTCTGTACCATC GAAGATGTAGCATGGTTAG TTTGTCAGTGTTCTGTAATTGCCAGGAGTC ATAGGACCCCCAAN CAACTTCCTT TGTATCAAGACTAA GATGTAAGAAGTT CTGCATCCATCC AAATTATATGGAACATGCCCATCTTAaaa                          ]
[-] EMBL CF276780             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACA GCCATAATTCAGGG CTCTGTGGCCCTCCGTTGAACA TTTCA TGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTT TGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTG ATCAGTATTTGTAGC TGTGTG TTTTCTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTC ATAGGACCCCCAAC AAACTTCCTT TGTATCAAGACTAA GATGTAAGAAGTTACTGCATCCATCCAAAATTATATGGAACATGTCCATCTTATATACTACCAAAAAAT             ]
[-] EMBL CB677638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CA GCCATAATTCAGGG CTGTGTGGCCCTCCGTTGAACA TTTCA TGCACAAATGATTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGTGAGGCCCAGTATTTTTACTACCGTGTAATGGCTGGAGTGGTTTTTGGTTTTTGGATATGGTTGTGGAATGCTCCTTTCCATGGGAGCGTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTGTTTCAAGAGGAAATGAAG CTCAGTATTGGTAGCTTGTGTG TTTTTTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTGTGTAATTGGCAGGAGTT ATAGGGCCCCCAAC AAACTTCCTTGTGTATCAAGGGTAA GATGTAAGAAGTTAGTGCTTCCATCCAAAATTATATGGAACAGGTCCATCTT                              ]
[+] EMBL AU172474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGTTGAACA TTTCA TGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTT TGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTG ATCAGTATTTGTAGC TGTGTG TTTTCTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTC ATAGGACCCCCAAC AAACTTCCTT TGTATCAAGACTAA GATGTAAGAAGTTACTGCATCCATCCAAAATTATATGGAACATGTCCATCTTATATACTACCAACAAAaa            ]
[+] EMBL BQ906260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTG ATCAGTATTTGTAGC TGTGTGCTTTTTTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTC ATAGGACCCCCAAC AAACTTCCTT TGTATCAAGACTAA GATGTAAGAAGTTACTGCATCCATCC AAATTATATGGAACATGTCCATCTTATATACTAAAAAAAA               ]
[+] EMBL AU182472             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TATTTGTAGC TGTGTG TTTTCTTTCTGTNCCATCTGAAGATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTCTATAGGACCCCCANCTAAACTTCCTT TGTATCAAGNCTAAGGATGTAAGAAGTTNCTGCATCCATCCAAAATTATATGGAACATGTCCATCTTATATACTACCNACAAAaa            ]


>consensus_13319#0 AGTTCCCAAGCTCCTTTGCACTCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGT GCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCA ACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTACGATGG GGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGGCAGGCC GGTACGGAGAATATACGACGGCGACGACGACGAAAACTACTACCGCAATGATGAAGTAGA CTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGCGGCGCAGTCATGCCGGAGAAGTA CAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCT TTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTGCCTGACTGCTG GTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCCCAACCGCTTCTCAGGTGAAATC CCTGCAGTCAATACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGGCAACGGC TTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCCAGACGCTGGTCACTTTAGATATT GGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTCATCTTTG AAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTTATCACAT CTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGATTCCCACA TCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGGATCATTA GATGGGTCTACCTATCAGGATAGAATCGATATAATCTGGAAGGGGCAGGAGATAATTTTC CAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGGTAACTCATTGTCTGAATGC ATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCTGAACTTGTCAAGGAACAAT CTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAATCTTGAGTCCCTTGACCTC TCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGCTGGTATATCTACCCTTAGC ACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACCCACCGGGAATCAACTTCAA ACCTTCACTGACCCATCAATATACAGCCATAATTCAGGGCTCTGTGGCCCTCCGTTGAAC ATTTCATGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGACTGTAGAACATGCGAGGAC CAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGGTTTTTGGCTATGGTTTGGA ATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGGTTTTGTTGATGGCATGCAA TGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCTTTCAAGAGGAAATACTGAT CAGTATTTGTAGCTGTGTGTTTTCTTTCTGTACCATCTGAAGATGTAGCATGGTTAGTTT TGTCAGTGTTCTGTAATTGGCAGGAGTCATAGGACCCCCAACAAACTTCCTTTGTATCAA GACTAAGATGTAAGAAGTTACTGCATCCATCCAAAATTATATGGAACATGTCCATCTTAT ATACTACCAACAAATACTGCTATGCTTG



consensusID : consensus_13319#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1397
fasta sequence
                              [TCAGGCAGCATACCCGCAGCATTAGGGAGTTTGACAAGCTTGGAGGATCTTGATTTGTCAGATAATGATCTGACAGGAGGACCGATTCCGGGAAATATGGGAAACAATTTCAAGATGCAGGGAGTTGATCATTCGTCAGGGAATTCCTCTAACAGCAGATCTGGTTCGGATTTCTGTCAACTGCTCTCCCTAAAGATCCTGTACCTGTCAAACAACAAGCTCACTGGTAAGCTGCCCGACTGCTGGTGGAACCTGCAAAATCTGCAGTTCATCGACTTGTCCAACAATGCATTCTCAGGTGAAATCCCTACAGTCCAGACGAACTACAACTGTTCTCTTGAATCGGTTCATCTTGCCGACAACGGCTTCACTGGTGTTTTTCCATCATCGTTAGAGATGTGTAAGGCGCTGATCACCCTAGATATTGGGAACAACAGATTCTTTGGAGGTATTCCTCCTTGGATTGGGAAAGGCCTTCTGTCGTTGAAGTTTCTTAGCCTGAAATCAAACAACTTCACAGGTGAAATCCCTTCAGAGTTGTCGAATCTCTCTCAACTTCAACTGTTAGACATAAGCAACAACGGTTTGACAGGATTGATTCCCAAATCTTTTGGCAACCTAACTTCCATGAAGAATCCAAATACTTTATCTGCTCAAGAAACATTAGAATGGTCTTCTTACATAAATTGGCTGCTTTACTCGGATGGAATCGATACAATCTGGAAGGGGCAAGAGCAATTTTTCGAAAAAACAATTGAATTACTAACGGGTATCAATTTGTCAGGTAACTCATTGTCGCAGTGTATCCCTGATGAGTTAACAACCCTCCAAGGCCTTCTATTTCTGAACTTGTCAAGAAACCATCTGTCATGCGGCATACCTAAAAACATTGGTAATACGAAAAATCTAGAGTTCCTTGACCTCTCATTGAACTAACTTTCAGGAGCCATTCCTCCAAGCCTTGCTGATATATCTACTCTTGACATTCTAAATCTCTCGAATAATCATCTATCAGGTAAGATACCCACTGGGAATCAACTTCAAACCCTCAGTGACCCATCAATATACCACAACAATTATGGTCTATGTGGCTTTCCATTGAACATTTCATGCACAAGTTCTTCACTTGCATCGGATGAGAGATTTTGTAGAAAATGCGAGGACCAGTATCTATCCTTCTGTGTAATGGCTGGAGTGGTTTTCGGGTTTTGGGTATGGTTTGGAATGTTCTTTTTCAGTGGAACCTTAAGGTATGCTGTTTTCGGCTTTGTTGATTGCATACAGTGTAAGGTTATGCAGAAGGTGTACTGTATTAATCAATTTCTTTCAAGAGGAACTACTGCTTAGTATCTGTAAGCTGTGGTTTCTTAATGTACCTTCTTATGATGAACTATATT]

[+] EMBL AK110508             [TCAGGCAGCATACCCGCAGCATTAGGGAGTTTGACAAGCTTGGAGGATCTTGATTTGTCAGATAATGATCTGACAGGAGGACCGATTCCGGGAAATATGGGAAACAATTTCAAGATGCAGGGAGTTGATCATTCGTCAGGGAATTCCTCTAACAGCAGATCTGGTTCGGATTTCTGTCAACTGCTCTCCCTAAAGATCCTGTACCTGTCAAACAACAAGCTCACTGGTAAGCTGCCCGACTGCTGGTGGAACCTGCAAAATCTGCAGTTCATCGACTTGTCCAACAATGCATTCTCAGGTGAAATCCCTACAGTCCAGACGAACTACAACTGTTCTCTTGAATCGGTTCATCTTGCCGACAACGGCTTCACTGGTGTTTTTCCATCATCGTTAGAGATGTGTAAGGCGCTGATCACCCTAGATATTGGGAACAACAGATTCTTTGGAGGTATTCCTCCTTGGATTGGGAAAGGCCTTCTGTCGTTGAAGTTTCTTAGCCTGAAATCAAACAACTTCACAGGTGAAATCCCTTCAGAGTTGTCGAATCTCTCTCAACTTCAACTGTTAGACATAAGCAACAACGGTTTGACAGGATTGATTCCCAAATCTTTTGGCAACCTAACTTCCATGAAGAATCCAAATACTTTATCTGCTCAAGAAACATTAGAATGGTCTTCTTACATAAATTGGCTGCTTTACTCGGATGGAATCGATACAATCTGGAAGGGGCAAGAGCAATTTTTCGAAAAAACAATTGAATTACTAACGGGTATCAATTTGTCAGGTAACTCATTGTCGCAGTGTATCCCTGATGAGTTAACAACCCTCCAAGGCCTTCTATTTCTGAACTTGTCAAGAAACCATCTGTCATGCGGCATACCTAAAAACATTGGTAATACGAAAAATCTAGAGTTCCTTGACCTCTCATTGAACTAACTTTCAGGAGCCATTCCTCCAAGCCTTGCTGATATATCTACTCTTGACATTCTAAATCTCTCGAATAATCATCTATCAGGTAAGATACCCACTGGGAATCAACTTCAAACCCTCAGTGACCCATCAATATACCACAACAATTATGGTCTATGTGGCTTTCCATTGAACATTTCATGCACAAGTTCTTCACTTGCATCGGATGAGAGATTTTGTAGAAAATGCGAGGACCAGTATCTATCCTTCTGTGTAATGGCTGGAGTGGTTTTCGGGTTTTGGGTATGGTTTGGAATGTTCTTTTTCAGTGGAACCTTAAGGTATGCTGTTTTCGGCTTTGTTGATTGCATACAGTGTAAGGTTATGCAGAAGGTGTACTGTATTAATCAATTTCTTTCAAGAGGAACTACTGCTTAGTATCTGTAAGCTGTGGTTTCTTAATGTACCTTCTTATGATGAACTATATT]


>consensus_13319#1 TCAGGCAGCATACCCGCAGCATTAGGGAGTTTGACAAGCTTGGAGGATCTTGATTTGTCA GATAATGATCTGACAGGAGGACCGATTCCGGGAAATATGGGAAACAATTTCAAGATGCAG GGAGTTGATCATTCGTCAGGGAATTCCTCTAACAGCAGATCTGGTTCGGATTTCTGTCAA CTGCTCTCCCTAAAGATCCTGTACCTGTCAAACAACAAGCTCACTGGTAAGCTGCCCGAC TGCTGGTGGAACCTGCAAAATCTGCAGTTCATCGACTTGTCCAACAATGCATTCTCAGGT GAAATCCCTACAGTCCAGACGAACTACAACTGTTCTCTTGAATCGGTTCATCTTGCCGAC AACGGCTTCACTGGTGTTTTTCCATCATCGTTAGAGATGTGTAAGGCGCTGATCACCCTA GATATTGGGAACAACAGATTCTTTGGAGGTATTCCTCCTTGGATTGGGAAAGGCCTTCTG TCGTTGAAGTTTCTTAGCCTGAAATCAAACAACTTCACAGGTGAAATCCCTTCAGAGTTG TCGAATCTCTCTCAACTTCAACTGTTAGACATAAGCAACAACGGTTTGACAGGATTGATT CCCAAATCTTTTGGCAACCTAACTTCCATGAAGAATCCAAATACTTTATCTGCTCAAGAA ACATTAGAATGGTCTTCTTACATAAATTGGCTGCTTTACTCGGATGGAATCGATACAATC TGGAAGGGGCAAGAGCAATTTTTCGAAAAAACAATTGAATTACTAACGGGTATCAATTTG TCAGGTAACTCATTGTCGCAGTGTATCCCTGATGAGTTAACAACCCTCCAAGGCCTTCTA TTTCTGAACTTGTCAAGAAACCATCTGTCATGCGGCATACCTAAAAACATTGGTAATACG AAAAATCTAGAGTTCCTTGACCTCTCATTGAACTAACTTTCAGGAGCCATTCCTCCAAGC CTTGCTGATATATCTACTCTTGACATTCTAAATCTCTCGAATAATCATCTATCAGGTAAG ATACCCACTGGGAATCAACTTCAAACCCTCAGTGACCCATCAATATACCACAACAATTAT GGTCTATGTGGCTTTCCATTGAACATTTCATGCACAAGTTCTTCACTTGCATCGGATGAG AGATTTTGTAGAAAATGCGAGGACCAGTATCTATCCTTCTGTGTAATGGCTGGAGTGGTT TTCGGGTTTTGGGTATGGTTTGGAATGTTCTTTTTCAGTGGAACCTTAAGGTATGCTGTT TTCGGCTTTGTTGATTGCATACAGTGTAAGGTTATGCAGAAGGTGTACTGTATTAATCAA TTTCTTTCAAGAGGAACTACTGCTTAGTATCTGTAAGCTGTGGTTTCTTAATGTACCTTC TTATGATGAACTATATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13319#0      AGTTCCCAAGCTCCTTTGCACTCTACCAAATCCAGCCATGGCAGCCAAGGCCCCTCTCGT 60
consensus_13319#1      ------------------------------------------------------------
                                                                                   

consensus_13319#0      GCTGCGCCTCTGTCTCTTCCTCTGCATCTCCCTCTCCCTCTTGCTGTTATCATCTCCTCA 120
consensus_13319#1      ------------------------------------------------------------
                                                                                   

consensus_13319#0      ACGGGTGACGAGCTTGAGCCTCGATGCCGATGTGGACGATCACTACTACCATTACGATGG 180
consensus_13319#1      ------------------------------------------------------------
                                                                                   

consensus_13319#0      GGACGAAGACGATGACAACTACTACCATGATGACGACGACGACGTCTTCTCCGGCAGGCC 240
consensus_13319#1      -------------------------------------------------TCAGGCAG-CA 10
                                                                        ** ***** * 

consensus_13319#0      GGTACGGAGAATATACGACGGCGACGACGACGAAAACTACTACCGCAATGATGAAGTAGA 300
consensus_13319#1      TACCCGCAGCATTAGGGAGTTTGACAAGCTTGGAGGATCTTGATTTGTCAGATAAT--GA 68
                           ** ** **    **    *** *    * *   *  *            **   **

consensus_13319#0      CTTCTCCAGCAGGCCGGCTCGGAGGCTATACGACGGCGGCGCAGTCATGCCGGAGAAGTA 360
consensus_13319#1      TCTGACAGGAGGACCGATTCCG-GGAAATATG--GGAAACAATTTCAAGATGCAGGGAGT 125
                         *  *  *  * ***  ** * **  *** *  **   *    *** *  * **     

consensus_13319#0      CAACGTCCTGAACGGCAACTCCTCCAACAGCAGCTCCGGCTCGGCCTTTTGCAGGTTGCT 420
consensus_13319#1      TGATCATTCGTCAGGGAATTCCTCTAACAGCAGATCTGGTTCGGATTTCTGTCAACTGCT 185
                         *      *   ** ** ***** ******** ** ** ****  ** **     ****

consensus_13319#0      TTCTCTCCAGATCCTGGACCTGTCAAACAACAAGCTCACCGGTAAGCTGCCTGACTGCTG 480
consensus_13319#1      CTCCCTAAAGATCCTGTACCTGTCAAACAACAAGCTCACTGGTAAGCTGCCCGACTGCTG 245
                        ** **  ******** ********************** *********** ********

consensus_13319#0      GTGGAATCTGCAGAGCCTGCAGTTCATGGACCTCTCCCCAACCGC-TTCTCAGGTGAAAT 539
consensus_13319#1      GTGGAACCTGCAAAATCTGCAGTTCATCGACTTGTCCAACAATGCATTCTCAGGTGAAAT 305
                       ****** ***** *  *********** *** * ***   *  ** **************

consensus_13319#0      CCCTGCAGTCAATACAAGCTACAATTGTTCTCTTGAATCGGTTCATCTTGCCGGCAACGG 599
consensus_13319#1      CCCTACAGTCCAGACGAACTACAACTGTTCTCTTGAATCGGTTCATCTTGCCGACAACGG 365
                       **** ***** * ** * ****** **************************** ******

consensus_13319#0      CTTCACCGGTGTTTTTCCATCAGCGCTAAAGGGATGCCAGACGCTGGTCACTTTAGATAT 659
consensus_13319#1      CTTCACTGGTGTTTTTCCATCATCGTTAGAGATGTGTAAGGCGCTGATCACCCTAGATAT 425
                       ****** *************** ** ** **   **  ** ***** ****  *******

consensus_13319#0      TGGGAACAACAATTTCTTTGGTGGCATTCCTCCTTGGATTGGGAAAGGCCTTTCATCTTT 719
consensus_13319#1      TGGGAACAACAGATTCTTTGGAGGTATTCCTCCTTGGATTGGGAAAGGCCTTCTGTCGTT 485
                       ***********  ******** ** ***************************   ** **

consensus_13319#0      GAAGATTCTTAGCCTTAGATCAAACAACTTCACCGGTGAAATTCCTTCTGAGTTATCACA 779
consensus_13319#1      GAAGTTTCTTAGCCTGAAATCAAACAACTTCACAGGTGAAATCCCTTCAGAGTTGTCGAA 545
                       **** ********** * *************** ******** ***** ***** **  *

consensus_13319#0      TCTTTCTCAACTCCAACTGCTAGATATGACCAACAACAGTTTGACAGGGTCGATTCCCAC 839
consensus_13319#1      TCTCTCTCAACTTCAACTGTTAGACATAAGCAACAACGGTTTGACAGGATTGATTCCCAA 605
                       *** ******** ****** **** ** * ******* ********** * ******** 

consensus_13319#0      ATCTTTTGGCAACTTAACATCCATGAAGAATCCAAAAATTGTATCCAGTGCGGGATCATT 899
consensus_13319#1      ATCTTTTGGCAACCTAACTTCCATGAAGAATCCAAATACTTTATCTGCTCAAGAAACATT 665
                       ************* **** ***************** * * ****   *   * * ****

consensus_13319#0      AGATGGGTCTACCTAT------------------CAGGATAGAATCGATATAATCTGGAA 941
consensus_13319#1      AGAATGGTCTTCTTACATAAATTGGCTGCTTTACTCGGATGGAATCGATACAATCTGGAA 725
                       ***  ***** * **                     **** ********* *********

consensus_13319#0      GGGGCAGGAGATAATTTTCCAAAAAACACTTCAATTAATGACGGGTATTGATTTGTCAGG 1001
consensus_13319#1      GGGGCAAGAGCAATTTTTCGAAAAAACAATTGAATTACTAACGGGTATCAATTTGTCAGG 785
                       ****** ***  * ***** ******** ** ***** * ********  **********

consensus_13319#0      TAACTCATTGTCTGAATGCATCCCCGATGAGTTAACAAACCTCCAAGGCCTTCGATTTCT 1061
consensus_13319#1      TAACTCATTGTCGCAGTGTATCCCTGATGAGTTAACAACCCTCCAAGGCCTTCTATTTCT 845
                       ************  * ** ***** ************* ************** ******

consensus_13319#0      GAACTTGTCAAGGAACAATCTATCGTGTGGGATACCTGAAAACATAGGTAGTTTGAAAAA 1121
consensus_13319#1      GAACTTGTCAAGAAACCATCTGTCATGCGGCATACCTAAAAACATTGGTAATACGAAAAA 905
                       ************ *** **** ** ** ** ****** ******* **** *  ******

consensus_13319#0      TCTTGAGTCCCTTGACCTCTCGTCAAATGAAATTTCAGGAGCCATTCCTCCAAGCCTTGC 1181
consensus_13319#1      TCTAGAGTTCCTTGACCTCTCATTGAACTAACTTTCAGGAGCCATTCCTCCAAGCCTTGC 965
                       *** **** ************ *  **  ** ****************************

consensus_13319#0      TGGTATATCTACCCTTAGCACTCTTAATCTCTCGTATAATCATCTATCAGGCAAGATACC 1241
consensus_13319#1      TGATATATCTACTCTTGACATTCTAAATCTCTCGAATAATCATCTATCAGGTAAGATACC 1025
                       ** ********* ***  ** *** ********* **************** ********

consensus_13319#0      CACCGGGAATCAACTTCAAACCTTCACTGACCCATCAATATACAGCCATAATTCAGGGCT 1301
consensus_13319#1      CACTGGGAATCAACTTCAAACCCTCAGTGACCCATCAATATACCACAACAATTATGGTCT 1085
                       *** ****************** *** ****************  * * ****  ** **

consensus_13319#0      CTGTGGCCCTCCGTTGAACATTTCATGCACAAATGCTTCAGTTGCGTCAGATGAGAGAGA 1361
consensus_13319#1      ATGTGGCTTTCCATTGAACATTTCATGCACAAGTTCTTCACTTGCATCGGATGAGAGATT 1145
                        ******  *** ******************* * ***** **** ** *********  

consensus_13319#0      CTGTAGAACATGCGAGGACCAGTATTTCTACTACTGTGTAATGGCTGGAGTGGTTTTCGG 1421
consensus_13319#1      TTGTAGAAAATGCGAGGACCAGTATCTATCCTTCTGTGTAATGGCTGGAGTGGTTTTCGG 1205
                        ******* **************** * * ** ***************************

consensus_13319#0      TTTTTGGCTATGGTTTGGAATGCTCCTTTCCATCGGAACCTGGAGGTATGCCATTTTCGG 1481
consensus_13319#1      GTTTTGGGTATGGTTTGGAATGTTCTTTTTCAGTGGAACCTTAAGGTATGCTGTTTTCGG 1265
                        ****** ************** ** *** **  *******  ********  *******

consensus_13319#0      TTTTGTTGATGGCATGCAATGTAAAGTTATGCAGAAAGTCTCCTCTGTTGATAAATTTCT 1541
consensus_13319#1      CTTTGTTGATTGCATACAGTGTAAGGTTATGCAGAAGGTGTACTGTATTAATCAATTTCT 1325
                        ********* **** ** ***** *********** ** * ** * ** ** *******

consensus_13319#0      TTCAAGAGGAAATACTGATCAGTATTTGTAGCTGTGTGTTTTCTTTCTGTACCATCTGAA 1601
consensus_13319#1      TTCAAGAGGAACTACTGCTTAGTATCTGTAAGC-TGTGGTTTCTTAATGTACCTTCTTAT 1384
                       *********** ***** * ***** ****    **** ******  ****** *** * 

consensus_13319#0      GATGTAGCATGGTTAGTTTTGTCAGTGTTCTGTAATTGGCAGGAGTCATAGGACCCCCAA 1661
consensus_13319#1      GATGAACTATATT----------------------------------------------- 1397
                       **** *  **  *                                               

consensus_13319#0      CAAACTTCCTTTGTATCAAGACTAAGATGTAAGAAGTTACTGCATCCATCCAAAATTATA 1721
consensus_13319#1      ------------------------------------------------------------
                                                                                   

consensus_13319#0      TGGAACATGTCCATCTTATATACTACCAACAAATACTGCTATGCTTG 1768
consensus_13319#1      -----------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)