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Oryza sativa
cluster # 13334 cluster # 13334       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13334#0 length = 1497 sequences # 10  
consensus_13334#1 length = 756 sequences # 2  

consensusID : consensus_13334#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1497
fasta sequence
                              [CATGGACTGAGGGAGTAGAAAATCCCCCCCTCGCCATGGCAGCCGCTTCCTTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGC-TGGAATAGTTGGATATCCAAAT-GTTGGC-AAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGT-GGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCA-TTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAGCACGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAGAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGTACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGACATTTCCTGTATAAACCATTGGTACCTGTGGAGGGAAATTTGTTCGGTGATGTGCAGTTTAAAAAA]

[+] EMBL CF280786             [CATGGACTGAGGGAGTAGAAAATCCCCCCCTCGCCATGGCAGCCGCTTCCTTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU077558             [                            CCTCGCCATGGCAGCCGCTTCCTTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAANGGGNTACTTCCTCGTGCGGTTCGAGCTTGGAATAGTTGGATATCCAAATGGTTGGCAAAATCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OS0308A              [                            CCTCGCCATGGCAGCCGCTTCCTTGGCTCCG CCACCGCCTCCTTCTCGCCGGCGCCGG GCCGGAGAGGGTTAAGGCGGCGGCG CTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGGCCAGTGCAGTGGTATCCTGGTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK063573             [                              TCGCCATGGCAGCCGCTTCCTTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGC TGGAATAGTTGGATATCCAAAT GTTGGC AAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGT GGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCA TTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAGCACGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAGAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGTACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGA                                                                  ]
[+] EMBL CB658662             [                                                  TTGGCTCCGCCCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGCTCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTTCTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGC TGGAATAGTTGGATATCCAAAT GTTGGC AAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGT GGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCA TTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB658663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGT GGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCA TTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTTTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAGCACGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAGAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGTACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGACATTTCCTGTATAAACCATTGGTACCTGTGGAGGGAAATTTGTTCGGTGAT               ]
[+] EMBL AU077559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gtcCCAGCAGCGCCTAGACCAGGTGTTNCAAGAGAGCTGAAGTGGGGTTCGTTTTGAAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAGCACGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAGAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGTACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGACAaaaaa                                                           ]
[-] EMBL CB666374             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAGTGATTTAGAGCTATTAGATTCCCCTGGCA TTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTTTCGTCCAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTTGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTTTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATTTTGTTTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCACCATGAGCAATGGAGATCTCAGATATTTTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCCCCCCCAACAATTACAGTGCCCTTTGTAGCAACCGTCCCAGCCCGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTTTAGAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGTACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTTTAGTTTAGAGAGAGCTTGAC                                                                 ]
[-] EMBL CF280787             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAGCACGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAAAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAAATGAGCTGATTTGTACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGACATTTCCTGTATAAACCATTGGTACCTGTGGAGTGAAATTTGTTCGGTGATGTGCAGTTTAAAAAA]
[+] EMBL C97971               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGCTGNAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTGGTAAAATGTTTGTGACAAAGCNCTCTGTNCACTTGTTCAATGGAGATGCCAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGNAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGACCCCCAACATGAGCAATGGAGATTTNAGATATTNTTAGATGTTAATAGCTGCTCTTTGTTCATAGTACCACANACTATAATTACAGTGCCCTTTGTTGCAACCGTNACAGCACGTACTTTNAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAGAGNNAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTNATTTGTACCAAGATCTTTGTAGGTTGCTACAATTTCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGANTTTTtt                                                           ]


>consensus_13334#0 CATGGACTGAGGGAGTAGAAAATCCCCCCCTCGCCATGGCAGCCGCTTCCTTGGCTCCGC CCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGC TCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTT CTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTA ACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGA CCAGATCCCTGCGCCCAGTGCAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAAC TGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCT TGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCA TGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTA ATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAG GTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTAC TTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTTAA TTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAG AGCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTGC CAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAG AAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATTAGTGAGACATC CAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGACAGCGATTGTG GTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGCCAGCCAAGCAG CCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGCCCTGGAGAGAC CCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCTGCTCTTTGTTC ATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAGCACGAACTTTC AGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTAGAGGAAATGTA GTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGTACCAAGATCTT TGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTTGACATTTCCTG TATAAACCATTGGTACCTGTGGAGGGAAATTTGTTCGGTGATGTGCAGTTTAAAAAA



consensusID : consensus_13334#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 756
fasta sequence
                              [TGCTGGCATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGGTATATATAAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCT]

[+] EMBL CB666373             [TGCTGGCATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGCGCCCAGTGCAGGTATATATAAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGAGCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCT]
[+] EMBL OSS10978A            [                                                                                                                                                                      ACGGAGAAGGAACTNNAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGG AATCGGAAAAGGATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGNGCAGAGAGAAGGGGTTACTTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTAAATTAATCGCTTTCTAA                                                                                                                                                                                                          ]


>consensus_13334#1 TGCTGGCATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTAACGAAGATTACG ACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGACCAGATCCCTGC GCCCAGTGCAGGTATATATAAGTGGTATCCTGGTCATATTGCGAAAACGGAGAAGGAACT GAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGCAAGGATTCCCTT GGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAGGATCATAGTCAT GAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTCTTACTTTGCTAA TCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTACAATGAAATTAGG TAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGAGAAGGGGTTACT TCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAAATCTTCCTTAAT TAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGGTGTTACAAGAGA GCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACCTGGCATTTTGCC AATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGATGATATAGGAGA AAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13334#0      CATGGACTGAGGGAGTAGAAAATCCCCCCCTCGCCATGGCAGCCGCTTCCTTGGCTCCGC 60
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      CCACCGCCTCCTTCTCGCCGGCGCCGGCGCCGGGGAGGGTTAAGGCGGCGGCGCCTTTGC 120
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      TCTCCAGGAGGCCTCCCGGGCGGTTCCTTCTCAGGGTGGCTAGCGAATCCTCCTCGATTT 180
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      CTGGTGACACGCTGCTGGGATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTA 240
consensus_13334#1      ------------TGCTGGCATTGTATGAGAAAGAGAGGTTAAGCCACTCGCTATATGCTA 48
                                   ****** *****************************************

consensus_13334#0      ACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGA 300
consensus_13334#1      ACGAAGATTACGACAAAGAGATGTTCTGGGACAACTTGGATGCGGATTTGCGCTACTGGA 108
                       ************************************************************

consensus_13334#0      CCAGATCCCTGCGCCCAGTGCAG-----------TGGTATCCTGGTCATATTGCGAAAAC 349
consensus_13334#1      CCAGATCCCTGCGCCCAGTGCAGGTATATATAAGTGGTATCCTGGTCATATTGCGAAAAC 168
                       ***********************           **************************

consensus_13334#0      GGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGC 409
consensus_13334#1      GGAGAAGGAACTGAAAGAACAGCTAAAGCTTATGGATGTTGTCATAGAGGTCCGCGACGC 228
                       ************************************************************

consensus_13334#0      AAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAG 469
consensus_13334#1      AAGGATTCCCTTGGCAACCAGCCATCCTAAGATGGATGCCTGGCTAGGCAATCGGAAAAG 288
                       ************************************************************

consensus_13334#0      GATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTC 529
consensus_13334#1      GATCATAGTCATGAATCGCGAAGACATGGTGTCAAATGAGGACAGAAATGCATGGGCCTC 348
                       ************************************************************

consensus_13334#0      TTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTAC 589
consensus_13334#1      TTACTTTGCTAATCAGGGTACCAAAGTTGTTTACTCAAACGGGCAGCTGGGCATGGGTAC 408
                       ************************************************************

consensus_13334#0      AATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGA 649
consensus_13334#1      AATGAAATTAGGTAGGATGGCAAAATCACTAGCATCTACTGTGAACACAAAGCGCAGAGA 468
                       ************************************************************

consensus_13334#0      GAAGGGGTTACTTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAA 709
consensus_13334#1      GAAGGGGTTACTTCCTCGTGCGGTTCGAGCTGGAATAGTTGGATATCCAAATGTTGGCAA 528
                       ************************************************************

consensus_13334#0      ATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGG 769
consensus_13334#1      ATCTTCCTTAATTAATCGCTTGCTAAAACGAAGAATGTGTCCAGCAGCGCCTAGACCAGG 588
                       ************************************************************

consensus_13334#0      TGTTACAAGAGAGCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACC 829
consensus_13334#1      TGTTACAAGAGAGCTGAAGTGGGTTCGTTTTGGAAGTGATTTAGAGCTATTAGATTCACC 648
                       ************************************************************

consensus_13334#0      TGGCATTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGA 889
consensus_13334#1      TGGCATTTTGCCAATGCGAATAAGTGACCAGACAGCTGCAATCAAACTTGCTATATGTGA 708
                       ************************************************************

consensus_13334#0      TGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCTCGTACAGTTATT 949
consensus_13334#1      TGATATAGGAGAAAGGTCGTATGACTTTGCTGATGTGGCAGCGATTCT------------ 756
                       ************************************************            

consensus_13334#0      AGTGAGACATCCAGCTGTAGGCCCTGAAGCGTTTCGAAGACGCTATAGGCTTGACATGGA 1009
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      CAGCGATTGTGGTAAAATGTTTGTGACAAAGCTCTCTGTTCACTTGTTCAATGGAGATGC 1069
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      CAGCCAAGCAGCCTTCCGCATCTTGTCTGACTACCGGAAAGGCAAATTTGGCTGCGTGGC 1129
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      CCTGGAGAGACCCCCAACATGAGCAATGGAGATCTCAGATATTCTTAGATGTTAATAGCT 1189
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      GCTCTTTGTTCATAGTACCACACACAACAATTACAGTGCCCTTTGTAGCAACCGTCACAG 1249
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      CACGAACTTTCAGATGTAGGAGGATGCAAAATGAATTGGCAATATGGCCCCCTCTGTCTA 1309
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      GAGGAAATGTAGTGTGGTAGTAGGTAGTTATTTGAATGTAAATGAACTGAGCTGATTTGT 1369
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      ACCAAGATCTTTGTAGGTTGCTACAATATCATGTGTGGATCTCTAGTTTAGAGCGTCCTT 1429
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      GACATTTCCTGTATAAACCATTGGTACCTGTGGAGGGAAATTTGTTCGGTGATGTGCAGT 1489
consensus_13334#1      ------------------------------------------------------------
                                                                                   

consensus_13334#0      TTAAAAAA 1497
consensus_13334#1      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)