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Oryza sativa
cluster # 13338 cluster # 13338       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13338#0 length = 1196 sequences # 11  
consensus_13338#1 length = 618 sequences # 1  

consensusID : consensus_13338#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1196
fasta sequence
                              [TCCCGTCCTCCCCTACCTGGAGGCTGCAGCT-CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA-TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAACAATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACAATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCAA-CTAATTGATTTTGGTCGGTAACAAAAACAAAGGGA]

[+] EMBL CF331365             [TCCCGTCCTCCCCTACCTGGAGGCTGCAGCT CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB656590             [ CCCGTCCTCCCCTACCTGGAGGCTGCAGCT CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAACAATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACAATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK101546             [            CTACCTGGAGGCTGCAGCT CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAACAATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACAATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCAA CTAATTGAT                          ]
[+] EMBL AK061262             [             TACCTGGAGGCTGCAGCT CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAACAATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACAATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAAGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCAA CTAATTGATTTT                       ]
[+] EMBL CB648919             [             TACCTCCAGGCTGCAGCTACCTGGCCTCCCGGGCAACTATGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCCAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAATCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAAGAGAACGgag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK069360             [                       CTGCAGCT CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACGGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAACAATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACAATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCAA CTAATTGATTTTGGTCGGTAACAAttac       ]
[+] EMBL CB637546             [                                CCTGGCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTTCTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAAGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU068337             [                                    GCCTCCCGGGCAACTAGGGTTCGGCAAATCCCCCGCAAGGAGGGTGAAACCTTTCCCCAAAACTCCCCAATCCCCACCCGACCTTNTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTCCGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTNACGGTGTACGTCGGGAACATGTCCTTCTACAACACGGAGGAGCAGGCCTATTAAGCTCTTTTTCCGCGCCGGCGAGATCAGGAAGATCATCATGGGA TCGACAAGAATTCCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AY278997             [                                                                                                                                                                                                    CCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCGGTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGTCGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTA TGAGCTCTTCTCCCGCGCCGGCGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTGCTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAACAATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACAATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCAA CTAATTGATTTTGGTCGGTAACAA           ]
[-] EMBL CB648920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTGATGTTGATTGGGGCTTTGAAGAAGGCAGACAACGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTCCGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGATTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTTCCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTTTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCTTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGCCGATGATTATGATAAGAGACGCCGGCGCTCATCTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTGGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTATATGTGGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTGGGTTGGCAA CTAATTGATTTTGGTCGGTAACAAAAAAAAAGGGA]
[-] EMBL CF331366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTTTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTACGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCAAGCTAATTGATTTTGGTCGGTAACAAAA         ]


>consensus_13338#0 TCCCGTCCTCCCCTACCTGGAGGCTGCAGCTCCTGGCCTCCCGGGCAACTAGGGTTCGGC AAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTT CTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTC CGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCG GTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGT CGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTATGAGCTCTTCTCCCGCGCCGG CGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTG CTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAAC AATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACA ATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCC TGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGT TGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAA GAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAA CGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTC GGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGA TAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTG CAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATAT GACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCAT AGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTG ACCTGTTATTTAGGTTGGCAACTAATTGATTTTGGTCGGTAACAAAAACAAAGGGA



consensusID : consensus_13338#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence
                              [CGAGACAAGGGATGAGTCCCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTCATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTCATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCACCTAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763615             [CGAGACAAGGGATGAGTCCCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCGTCGAGCTCATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTCATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCACCTAAAAAAAAAAAAAAAAAAA]


>consensus_13338#1 CGAGACAAGGGATGAGTCCCGCACGGACTACGATCCTGGAAGAGGTGGCTATGGTAAGAT GGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGTTGACTATGGAGGTGCTTTTCAACC TAATGCACCACCTCAATATGACAGAGGTGACAGGAAGAGAGGGTATGGAGATTCTTACCG GAACGACAGAGATTACCAACGGAAACGTTACCGGAACGATGAGCGATCGTCGCAAAGAGC ACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTCGGAGAAGAATCCTAGGTTTCGTGA GAAAGGTGATTCTGATGAAGAAGACGATGATTATGATAAGAGACGCCGGCGCTGAACTGA AAGAAACAATTGCTGATAAATGCAAATGGGCAGTTGCAGTGACTACACTAGTAAAGCCCG TCGAGCTCATGTTTTTTACCCTGTTGTGTACCATATGACTTATATATCTGTCGTCAGCTC ATTTCTATGTTGCGGTTCATCACCACATGCTTGCATAGGTCTCGCATGCGACTGGGAATG GATTTTGTGTTCATTGACACTTCAGCTTATGTATTGACCTGTTATTTAGGTTGGCACCTA AAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13338#0      TCCCGTCCTCCCCTACCTGGAGGCTGCAGCTCCTGGCCTCCCGGGCAACTAGGGTTCGGC 60
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      AAATCCCCCGCAAGGAGGGTGAAACCCTTCCCCAAAACTCCCCAATCCCCACCCGACCTT 120
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      CTTCGAAATCGGAGGCAAAACCCTAATCGCAAACAGCTCGTCCTCGCGCGGCCGCCGCTC 180
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      CGCAGCAATGGCGTCCCTCTTCAAGGACCCGACCAAGCTGTCCGCGTACCGGGACAGGCG 240
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      GTTCACCGGGACGCAGGAGGAGTACGAGGCGGCGCTGCAGGCGTCGGTGACGGTGTACGT 300
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      CGGGAACATGTCCTTCTACACCACGGAGGAGCAGGCCTATGAGCTCTTCTCCCGCGCCGG 360
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      CGAGATCAGGAAGATCATCATGGGACTCGACAAGAACTCCAAGACCCCCTGCGGCTTCTG 420
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      CTTCATACTGTACTACTCCAGGGAGGATGCTGAAGATGCGGTCAAATATATTAGTGGAAC 480
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      AATGCTTGATGATCGCCCAATTCGTGTTGATTTTGATTGGGGCTTTGAAGAAGGCAGACA 540
consensus_13338#1      ------------------------------------------------------------
                                                                                   

consensus_13338#0      ATGGGGTCGTGGACGGAGTGGTGGACAAGTAAGGGATGAGTACCGCACGGACTACGATCC 600
consensus_13338#1      ------------------------CGAGACAAGGGATGAGTCCCGCACGGACTACGATCC 36
                                                 *   *********** ******************

consensus_13338#0      TGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGT 660
consensus_13338#1      TGGAAGAGGTGGCTATGGTAAGATGGTTCAGAAAGAGCTAGAAGCACAACGTGAGTTAGT 96
                       ************************************************************

consensus_13338#0      TGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAA 720
consensus_13338#1      TGACTATGGAGGTGCTTTTCAACCTAATGCACCACCTCAATATGACAGAGGTGACAGGAA 156
                       ************************************************************

consensus_13338#0      GAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAA 780
consensus_13338#1      GAGAGGGTATGGAGATTCTTACCGGAACGACAGAGATTACCAACGGAAACGTTACCGGAA 216
                       ************************************************************

consensus_13338#0      CGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTC 840
consensus_13338#1      CGATGAGCGATCGTCGCAAAGAGCACCTGACTCTGAGTTCAAGAGAGATGCGATTGATTC 276
                       ************************************************************

consensus_13338#0      GGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGA 900
consensus_13338#1      GGAGAAGAATCCTAGGTTTCGTGAGAAAGGTGATTCTGATGAAGAAGACGATGATTATGA 336
                       ************************************************************

consensus_13338#0      TAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTG 960
consensus_13338#1      TAAGAGACGCCGGCGCTGAACTGAAAGAAACAATTGCTGATAAATGCAAATGGGCAGTTG 396
                       ************************************************************

consensus_13338#0      CAGTGACTACACTAGTAAAGCCCGTCGAGCTTATGTTTTTTACCCTGTTGTGTACCATAT 1020
consensus_13338#1      CAGTGACTACACTAGTAAAGCCCGTCGAGCTCATGTTTTTTACCCTGTTGTGTACCATAT 456
                       ******************************* ****************************

consensus_13338#0      GACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCAT 1080
consensus_13338#1      GACTTATATATCTGTCGTCAGCTCATTTCTATGTTGCGGTTCATCACCACATGCTTGCAT 516
                       ************************************************************

consensus_13338#0      AGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTTATTGACACTTCAGCTTATGTATTG 1140
consensus_13338#1      AGGTCTCGCATGCGACTGGGAATGGATTTTGTGTTCATTGACACTTCAGCTTATGTATTG 576
                       *********************************** ************************

consensus_13338#0      ACCTGTTATTTAGGTTGGCAACTAATTGATTTTGGTCGGTAACAAAAACAAAGGGA 1196
consensus_13338#1      ACCTGTTATTTAGGTTGGCACCTAAAAAA-----------AAAAAAAAAAAAA--- 618
                       ******************** ****   *           ** ***** ***    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)