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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13346#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1573 fasta sequence
[TCCCCTTCTCCATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC-GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATCCGCCTATCATCCCGCAGCAGATG-CCTCCACCATCCTATGTGCGGACAGGCCG-CCCTCGTCTGTCTGAATTTCATGACAGGTCCTTTGAGGGTGACTATGGCCGGGAGGGTGATGAGATTGGGAATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGTCCGCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTAAAAAAAGAAGTGTAGTTG]
[+] EMBL AK103731 [TCCCCTTCTCCATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATCCGCCTATCATCCCGCAGCAGATGCCCTCCACCATCCTATGTGCGGACAGGCCG CCCTCGTCTGTCTGAATTTCATGACAGGTCCTTTGAGGGTGACTATGGCCGGGAGGGTGATGAGATTGGGAATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGT GCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGA ]
[+] EMBL AK065800 [ CCCTTCTCCATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACGCTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATCCGCCTATCATCCCGCAGCAGATG CCTCCACCATCCTATGTGCGGACAGGCCG CCCTCGTCTGTCTGAATTTCATGACAGGTCCTTTGAGGGTGACTATGGCCGGGAGGGTGATGAGATTGGGAATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGTCCGCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCAACACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTACTCGAAGAAGTGTAGTTG]
[+] EMBL CB672141 [ ATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGAGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTGCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATGCGCCTA ]
[+] EMBL CB663753 [ CCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGACCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGTATCCGCCTATCATCCCGCAGGAGATG CCTCCACCATCCTATGTGCGGACAGGCCGCCCCTCGTC ]
[+] EMBL AU166493 [ AACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGAGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGT ]
[+] EMBL CB663752 [ CCAGGTGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTCGGGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGG ]
[+] EMBL AU062752 [ CCGGNTCTTCTACGACTTCCAGCGCCGCCGCTTNGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTNCATCTTCGNGTCCGNCGCCGCTGCTCGGCATCCGNCTATCATCCCGCAGCAGATG CCTCCACCATCCTATGTGCGGACAGGCCG NCCTTGTNTGTCTGAATTTCATGACAGGTCCTTTGAGGGT ]
[-] EMBL CB663754 [ AATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGTCCGCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATTTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGC ]
[-] EMBL CB672142 [ GCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCACCTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGTTGAGGAAGTATCCGGACCATTTTGTCATCATCACAAGATCGAAAGGCAGGGTATCATCGGAGTTCGTCTCGATGGTCTCTTTGCTCTCCTAGAGGTAACCTGGGCCTTGGCATAATATGTTCTCACCGTTCTGGCCCT CCGAAGAATGATTGGCATCTTCAATCGCTCAAGTGAATTGAAGCgct ]
[+] EMBL BM419772 [ aatTGTGTGGCACCACA CAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACCAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTNTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTGACAGCACTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTAAAAAAAAAA ]
[+] EMBL AU166494 [ CTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTAAAAAA ]
[+] EMBL AU100772 [ AAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGNTCGAAAGGCNGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCNCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTNAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTAAAAAaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||