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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13350#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1486 fasta sequence
[TGACGGCGACTGGGTTTGCCCAGACCCGAGTTGTGGCAATGTGAACTTTGCAAGGAGGACTGAATGCAACAAGTGTGGAGCACCTTCTCCTGCTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGGTATAATAAATCTGGTGGAGGGGGTGGAGGCTACAATCGTGGTGGTGGCGATTTTAGTTCTGGAGGTGGCGGTGGCTACAACAGAGGTGGAGGAGATTACAACTCTGGTGGCCGTGGTGGTGGCACTGGAGGGGGAGGAAGAGGAGGAGGTTACAATAGAGGTGGTGGCGATGATCGTGGATTTGATGACCACCGTGGTGGCAGGGGTGGTTATGGGGGAAGAGACCAAGGGAACAACCAAAGGGGAGACGAAAGTGGTTATGACGCTGGTAGCTATGGACAAGTTCCTCCTCAAGGTCCTCCTTCCTATGGTGGGCCTGGTGGTGACTATGCAGCACCTCCAAGCTCCTATGGAGGCAATAATGCATACAATTCAGATTCTGCAGTGCCACCTCCTAGTAGCTATGGTGGTGGTCCAGGTTCATATCCACCAAGTTATGGTGCACCACCTCCGAACCCGCCATATAGCGGTGGTGCTCCAGGTGGCCAAGGTAGCCTACCTCCTTCATATGATGGTGGGTATGGTGGTCGGCCTATGCCTGGGGGTGGAGGCCCTGGTGCACCTCCACCCTATCATGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGGCGGCGGATACACTGGCAGTGCTGCTCCAGAGCCAGCTGCAAAGGTTAAGCAGTGTGATGCAAACTGTGATGAGACTTGTGATAATGCAAGAATTTACATCTCCAACTTACCTCCTGATGTGACTGTTGAGGAACTGCAAGAACTATTTGGAGGAATCGGCCAGGTTGGAAGGATCAAGCAGAAACGTGGCTACAAAGACCAGTGGCCCTGGAACATAAAGATCTATACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTATAAAATTAGTGTTGCGATGGCTGAGAAATCAGCTCCTAGAGCTCCTGCATATGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAGAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTTCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAATGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGATCCATGTTATGTGAATTTTTCCATAGAGGCAGATGGATAAGCTCCAAATGCTGGTAGTTTTGAGAAAAA]
[+] EMBL CB672466 [TGACGGCGACTGGGTTTGCCCAGACCCGAGTTGTGGCAATGTGAACTTTGCAAGGAGGACTGAATGCAACAAGTGTGGAGCACCTTCTCCTGCTGGAGGTGGAGGTGGAGGTGGAGGTGGAGGGTATAATAAATCTGGTGGAGGGGGTGGAGGCTACAATCGTGGTGGTGGCGATTTTAGTTCTGGAGGTGGCGGTGGCTACAACAGAGGTGGAGGAGATTACAACTCTGGTGGCCGTGGTGGTGGCACTGGAGGGGGAGGAAGAGGAGGAGGTTACAATAGAGGTGGTGGCGATGATCGTGGATTTGATGACCACCGTGGTGGCAGGGGTGGTTATGGGGGAAGAGACCAAGGGAACAACCAAAGGGGAGACGAAAGTGGTTATGACGCTGGTAGCTATGGACAAGTTCCTCCTCAAGGTCCTCCTTCCTATGGTGGGCCTGGTGGTGACTATGCAGCACCTCCAAGCTCCTATGGAGGCAATAATGCATACAATTCAGATTCTGCAGTGCCACCTCCTACTAGCTATGGTGGTGGTCCAGGTTCATATCCACCAAGTTATGGTGCACCACCTCCGAACCCGCCATATAGCGGTGGTGCTCCATGTGGCCAATGTAGCCTACCTCCT ]
[+] EMBL BP184672 [ GCGGTGGCTACAACAGAGGTGGAGGAGATTACAACTCTGGTGGCCGTGGTGGTGGCACTGGAGGGGGAGGAAGAGGAGGAGGTTACAATAGAGGTGGTGGCGATGATCGTGGATTTGATGACCACCGTGGTGGCAGGGGTGGTTATGGGGGAAGAGACCAAGGGAACAACCAAAGGGGAGACGAAAGTGGTTATGACGCTGGTAGCTATGGACAAGTTCCTCCTCAAGGTCCTCCTTCCTATGGTGGGCCTGGTGGTGACTATGCAGCACCTCCAAGCTCCTATGGAGGCAATAATGCATACAATTCAGATTCTGCAGTGCCACCTCCTAGTAGCTATGGTGGTGGTCCAGGTTCATATCCACCAAGTTATGGTGCACCACCTCCGAACCCGCCATATAGCGGTGGTGCTCCAGGTGGCCAAGGTAGCCTACCTCCTTCATATGATGGTGGGTATGGTGGTCGGCCTATGCCTGGGGGTGGAGGCCCTGGTGCACCTCCACCCTATCATGGTGGTGGTGGTGG ]
[+] EMBL C26964 [ CGTGGATTTAATGACCACCGTGGTGGCAGGGGTGGTTATGGGGGAAGAGACCAAGGGAACAACCAAAGGGGAGACGAAAGTGGTTATAACGCTGGTAGCTATGGACAAGTTCCTCCTCAAGGTCCTCCTTCCTATGGTGGGCCTGGTGGTGACTATGCAGCACCTCCAAGCTCCTATGGAGGCAATAATGCATACANTTCANATTCTGCAGTNCCACCTCCTAGTAGCTATGGTGGTGGTCCA ]
[+] EMBL AK061428 [ TAGCTATGGACAAGTTCCTCCTCAAGGTCCTCCTTCCTATGGTGGGCCTGGTGGTGACTATGCAGCACCTCCAAGCTCCTATGGAGGCAATAATGCATACAATTCAGATTCTGCAGTGCCACCTCCTAGTAGCTATGGTGGTGGTCCAGGTTCATATCCACCAAGTTATGGTGCACCACCTCCGAACCCGCCATATAGCGGTGGTGCTCCAGGTGGCCAAGGTAGCCTACCTCCTTCATATGATGGTGGGTATGGTGGTCGGCCTATGCCTGGGGGTGGAGGCCCTGGTGCACCTCCACCCTATCATGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGGCGGCGGATACACTGGCAGTGCTGCTCCAGAGCCAGCTGCAAAGGTTAAGCAGTGTGATGCAAACTGTGATGAGACTTGTGATAATGCAAGAATTTACATCTCCAACTTACCTCCTGATGTGACTGTTGAGGAACTGCAAGAACTATTTGGAGGAATCGGCCAGGTTGGAAGGATCAAGCAGAAACGTGGCTACAAAGACCAGTGGCCCTGGAACATAAAGATCTATACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTATAAAATTAGTGTTGCGATGGCTGAGAAATCAGCTCCTAGAGCTCCTGCATATGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAGAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTTCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAATGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATT ]
[+] EMBL CB664900 [ TATGGAGGCAATAATGCATACAATTCAGATTCTGCAGTGCCACCTCCTAGTAGCTATGGTGGTGGTCCAGGTTCATATCCACCAAGTTATGGTGCACCACCTCCGAACCCGCCATATAGCGGTGGTGCTCCAGGTGGCCAAGGTAGCCTACCTCCTTCATATGATGGTGGGTATGGTGGTCGGCCTATGCCTGGGGGTGGAGGCCCTGGTGCACCTCCACCCTATCATGGTGGTGGTGGTGGTGGTGGTGGCGGCGGCGGTGGCAGCGGATACACTGGGAATGCTGCTCCAGAGCCAGCTGCAAAGGTTAAGCAATGTGATGCAAACTGTGATGAGACTTGTGATAATGCAATAATTTACATCTCCAACTTACCTCCTGATGTGAGTGTTGAAGAACTGCGAGAACTATTTGGAGGAATCGGCCAGGTTGGAAGGATAAAGCGGAAACTTGGTTACAAAGACAAGGGGCCCTGTAACATAAAGATCTATACTGATGACTCTGGAAATAATAAAGGAGATGCCTGCCTTGCCTATGAATATCCTTCTGCTGCTCATTCAACTG ]
[+] EMBL AU093877 [ CAAACTGTGATGAGACTTGTGATAATGCAAGAATTTACATCTCCAACTTACCTCCTGATGTGACTGTTGAGGAACTGCAAGAACTATTTGGAGGAATCGGCCAGGTTGGAAGGATCAAGCAGAAACGTGGCTACAAAGACCAGTGGCCCTGGAACATAAAGATCTATACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTATAAAATTAGTGTTGCGATGGCTGAGAAATCAGCTCCTAGAGCTCCTGCATATGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAGAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTTCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAATGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGATCCATGTTATGTGAATTTTTCCATAGAGGCAGATGGATAAGCTCCAAATGCTGGTAGTTTTGAGAAAAA]
[+] EMBL AA751521 [ acgAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTATAAAATTAGTGTGGCGATGGCTGANAAATCAGCTCCTANANCTCCTGCATATGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAGANATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCACGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCNTCTGTGANAAACCATTTCTATTCCTGTCCATCGGACTTGTACTCAAAACAANANCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAATGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGA ]
[+] EMBL AU092427 [ ATGAAGATCNTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTNTAAAATTAGTGTTNCGATGGCTGAGAAATCANCTCCTAGAGCTCCTGCATATGGTCATGGAGGTGNACGTGGTGGCTATGGTGGAGNTCGCAGGGATAACTTCAGAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTNAGATTGTCATCTGTGAGAANCCATTTCTATNCCTGTTCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATNCCATTGTCATACTCCAATGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGATCCATGTTAaaaa ]
consensusID : consensus_13350#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 813 fasta sequence
[CATCCCAAATGAAGTGAAAAATTTAAGTATTCACCAAATGTCATACAACCAAACTATTGCAAGATACATACGGCACGTAAATGTCAAACAAAAACGACGTGAACGGCTTGGAGCTTCGCCCATCTGCAAGTCCAGGGCTCCAGATCAAGCCTCCTAAAACAGATCCAAATACCAAACCCATATGGAACAGCGAGGAGAAACTTCAGAAAGAAATGAAAGAGTCGGAAAAAGCAATCAACGGAAAGAAGCCTGACGTCTATCTTCCGCAACTGTGATAGAAACCATACAAAGAAACCAGATGAACTGGAGGTATCCACCGCAACTGTGACAAACCATACAAAGAAACCAGATGAACTGGAGGTATCCAGCCAACAGGTCAATTTGCCAATCAGCACAAGGAACTGGATCCGGAGGGCAGATACAAGGATGGCTTCGAGGTTTCACAATACGCTGCAGTGATAGAAGAGCAGGCAGCATCGATGTGCAGCAGACGGTGTTGGCTGCACACATTGTACAGCAGCAAGCCTGTTTCTCCTCGCCAAAATCCAAGCTAGTGATCCACCGGCTGAGTTACCATGTGGAATGTAAGCGTTATAGCAAAATTTGCAATCGCAGAAATAAAAAGGTAAGCAATCACGGGATAGCAAAGCATTGCAGAATCATAACAGATCGGCACTCACCTGAAATAACATCTCAAAACTACCAGCATTTGGAGCTTATCCATCTGCCTCTTACGCTCTTGTTTTGAGTACAAGTCCGATGAACAGGAATAGAAATGGTTTCTCACAGATGACAATCTTAGTAACTATATTA]
[+] EMBL CB664901 [CATCCCAAATGAAGTGAAAAATTTAAGTATTCACCAAATGTCATACAACCAAACTATTGCAAGATACATACGGCACGTAAATGTCAAACAAAAACGACGTGAACGGCTTGGAGCTTCGCCCATCTGCAAGTCCAGGGCTCCAGATCAAGCCTCCTAAAACAGATCCAAATACCAAACCCATATGGAACAGCGAGGAGAAACTTCAGAAAGAAATGAAAGAGTCGGAAAAAGCAATCAACGGAAAGAAGCCTGACGTCTATCTTCCGCAACTGTGATAGAAACCATACAAAGAAACCAGATGAACTGGAGGTATCCACCGCAACTGTGACAAACCATACAAAGAAACCAGATGAACTGGAGGTATCCAGCCAACAGGTCAATTTGCCAATCAGCACAAGGAACTGGATCCGGAGGGCAGATACAAGGATGGCTTCGAGGTTTCACAATACGCTGCAGTGATAGAAGAGCAGGCAGCATCGATGTGCAGCAGACGGTGTTGGCTGCACACATTGTACAGCAGCAAGCCTGTTTCTCCTCGCCAAAATCCAAGCTAGTGATCCACCGGCTGAGTTACCATGTGGAATGTAAGCGTTATAGCAAAATTTGCAATCGCAGAAATAAAAAGGTAAGCAATCACGGGATAGCAAAGCATTGCAGAATCATAACAGATCGGCACTCACCTGAAATAACATCTCAAAACTACCAGCATTTGGAGCTTATCCATCTGCCTCTTACGCTCTTGTTTTGAGTACAAGTCCGATGAACAGGAATAGAAATGGTTTCTCACAGATGACAATCTTAGTAACTATATTA]
consensusID : consensus_13350#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 767 fasta sequence
[ACATAAAGATCTATACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTATAAAATTAGTGTTGCGATGGCTGAGAAATCAGCTCCTAGAGCTCCTGCATATGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAGAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTTCATCGGACTTGTACTCAAAACAAGAGCGTAAGATGGATAAGCTCCAAATGCTGGTAGTTTTGAGATGTTATTTCAGGTGAGTGCCGATCTGTTATGATTCTGCAATGCTTTGCTATCCCGTGATTGCTTACCTTTTTATTTCTGCGATTGCAAATTTTGCTATAACGCTTACATTCCACATGGTAACTCAGCCGGTGGATCACTAGCTTGGATTTTGGCGAGGAGAAACAGGTAGGGCATTTTTGTTCTTCGATAGGTTTACTAGATCTAGAATCCATTAGTTACGGATATCTCTGTGGATATTAGATGTATATGAACCACCTTTTCTGGTACACATTCATTGACTTATTCATGTGGTTTGCGTCAAATAAAGCAAGGATATGTTACTATTTAGATACTATTTCCAGACGATTAAAAGG]
[-] EMBL CB672467 [ACATAAAGATCTATACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGCTGCTCATTCAGCTGGTGGATTCTATAACAATTATGAAATGAGAGGCTATAAAATTAGTGTTGCGATGGCTGAGAAATCAGCTCCTAGAGCTCCTGCATATGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAGAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTTCATCGGACTTGTACTCAAAACAAGAGCGTAAGATGGATAAGCTCCAAATGCTGGTAGTTTTGAGATGTTATTTCAGGTGAGTGCCGATCTGTTATGATTCTGCAATGCTTTGCTATCCCGTGATTGCTTACCTTTTTATTTCTGCGATTGCAAATTTTGCTATAACGCTTACATTCCACATGGTAACTCAGCCGGTGGATCACTAGCTTGGATTTTGGCGAGGAGAAACAGGTAGGGCATTTTTGTTCTTCGATAGGTTTACTAGATCTAGAATCCATTAGTTACGGATATCTCTGTGGATATTAGATGTATATGAACCACCTTTTCTGGTACACATTCATTGACTTATTCATGTGGTTTGCGTCAAATAAAGCAAGGATATGTTACTATTTAGATACTATTTCCAGACGATTAAAAGG]
consensusID : consensus_13350#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence
[TCCGGAACGCTCCCAAACCCTAGGCGCGTGACCATGTCGGGGTCGTACGGATCCGACGACTACCGCGGCGGCTACGGCGGCCGAGGTGGCGGCGGAGGCGGCCGTGGGAGGGGAGGTGGCGGAGGAGGAGGGGGAGGATATGGTGGTGGTGGTGTGGGAGGTGGATATGGTGGTGGTGGCGGAGGATATGGCGGCGGTGGCGGAGGGTACGGCGGCGGTGGTAGAGGTGGCGGTGGAGGAGGAGGCTACGGCGGCGGTGGCGGCGGCGGGAGAGGTGGCGGCGGGAGGGGTGGAGGACGTGACGGTGACTGGGTTTGCCCAGACCCGAGTTGTGGCAATGTTNACTTTNCAAAGAGGACTGATTCCACAAGTGT]
[+] EMBL AU093876 [TCCGGAACGCTCCCAAACCCTAGGCGCGTGACCATGTCGGGGTCGTACGGATCCGACGACTACCGCGGCGGCTACGGCGGCCGAGGTGGCGGCGGAGGCGGCCGTGGGAGGGGAGGTGGCGGAGGAGGAGGGGGAGGATATGGTGGTGGTGGTGTGGGAGGTGGATATGGTGGTGGTGGCGGAGGATATGGCGGCGGTGGCGGAGGGTACGGCGGCGGTGGTAGAGGTGGCGGTGGAGGAGGAGGCTACGGCGGCGGTGGCGGCGGCGGGAGAGGTGGCGGCGGGAGGGGTGGAGGACGTGACGGTGACTGGGTTTGCCCAGACCCGAGTTGTGGCAATGTTNACTTTNCAAAGAGGACTGATTCCACAAGTGT]
consensusID : consensus_13350#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 344 fasta sequence
[AGAGGACGAGACAAGGGGGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAAAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCACGCTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTCCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAGTGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGATCTATGTTATGTGAATTTTTCCAAAAAAA]
[-] EMBL CA761878 [AGAGGACGAGACAAGGGGGGTCATGGAGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAAAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCACGCTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTCCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAGTGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGATCTATGTTATGTGAATTTTTCCAAAAAAA]
[+] EMBL CA767065 [ AGGTGGACGTGGTGGCTATGGTGGAGGTCGCAGGGATAACTTCAAAGATGGAGGAGGCCATGGGCCTAACAGGCATCAAGGTGGTGGTTCACGCTCAAGGCCATACTGAAAGCAACTAATATAGTTACTAAGATTGTCATCTGTGAGAAACCATTTCTATTCCTGTCCATCGGACTTGTACTCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGGAATTATATTCCATTGTCATACTCCAGTGTTGGTCGGATGTTTGTTTGTCTCATCCAAAAAGTGATTGATCTATGTTATGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13350#0 TGACGGCGACTGGGTTTGCCCAGACCCGAGTTGTGGCAATGTGAACTTTGCAAGGAGGAC 60
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TGAATGCAACAAGTGTGGAGCACCTTCTCCTGCTGGAGGTGGAGGTGGAGGTGGAGGTGG 120
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 AGGGTATAATAAATCTGGTGGAGGGGGTGGAGGCTACAATCGTGGTGGTGGCGATTTTAG 180
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TTCTGGAGGTGGCGGTGGCTACAACAGAGGTGGAGGAGATTACAACTCTGGTGGCCGTGG 240
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TGGTGGCACTGGAGGGGGAGGAAGAGGAGGAGGTTACAATAGAGGTGGTGGCGATGATCG 300
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TGGATTTGATGACCACCGTGGTGGCAGGGGTGGTTATGGGGGAAGAGACCAAGGGAACAA 360
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 CCAAAGGGGAGACGAAAGTGGTTATGACGCTGGTAGCTATGGACAAGTTCCTCCTCAAGG 420
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TCCTCCTTCCTATGGTGGGCCTGGTGGTGACTATGCAGCACCTCCAAGCTCCTATGGAGG 480
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 CAATAATGCATACAATTCAGATTCTGCAGTGCCACCTCCTAGTAGCTATGGTGGTGGTCC 540
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 AGGTTCATATCCACCAAGTTATGGTGCACCACCTCCGAACCCGCCATATAGCGGTGGTGC 600
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TCCAGGTGGCCAAGGTAGCCTACCTCCTTCATATGATGGTGGGTATGGTGGTCGGCCTAT 660
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 GCCTGGGGGTGGAGGCCCTGGTGCACCTCCACCCTATCATGGTGGTGGTGGTGGTGGTGG 720
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TGGCGGCGGCGGTGGCGGCGGATACACTGGCAGTGCTGCTCCAGAGCCAGCTGCAAAGGT 780
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TAAGCAGTGTGATGCAAACTGTGATGAGACTTGTGATAATGCAAGAATTTACATCTCCAA 840
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 CTTACCTCCTGATGTGACTGTTGAGGAACTGCAAGAACTATTTGGAGGAATCGGCCAGGT 900
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ------------------------------------------------------------
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ------------------------------------------------------------
consensus_13350#0 TGGAAGGATCAAGCAGAAACGTGGCTACAAAGACCAGTGGCCCTGGAACATAAAGATCTA 960
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 -----------------------------------------------ACATAAAGATCTA 13
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 -------------CATCCCAAATGAAGTGAAAAATTTAAGTATTCACCAAATGTCATACA 47
consensus_13350#0 TACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGC 1020
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 TACTGATGACTCTGGAAAGAATAAAGGAGATGCCTGCCTTGCCTATGAAGATCCTTCTGC 73
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ACCAAACTATTGCAAGATACATACGGCACGTAAATGTCAAACAAAAACGACGTGAACGGC 107
consensus_13350#0 TGCTCATTCAGCTGGTGGATTCTATAACAATTATGAA--ATGAGAGGCTATAAAATTAGT 1078
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 TGCTCATTCAGCTGGTGGATTCTATAACAATTATGAA--ATGAGAGGCTATAAAATTAGT 131
consensus_13350#3 -------------------------------TCCGGA--ACGCTCCCAAACCCTAGGCGC 27
consensus_13350#1 TTGGAGCTTCGCCCATCTGCAAGTCCAGGGCTCCAGATCAAGCCTCCTAAAACAGATCCA 167
consensus_13350#0 GTTGCGATGGCTGAGAAAT-CAGCTCCTAGAG-CTCCTGCATATGGTCATGGAGGTGGAC 1136
consensus_13350#4 -------------AGAGGA-CGAGACAAGGGG------------GGTCATGGAGGTGGAC 34
consensus_13350#2 GTTGCGATGGCTGAGAAAT-CAGCTCCTAGAG-CTCCTGCATATGGTCATGGAGGTGGAC 189
consensus_13350#3 GTGACCATGTCGGGGTCGTACGGATCCGACGA-CTACCGCG-GCGGCTACGGCGGCCGAG 85
consensus_13350#1 AATACCAAACCCATATGGAACAGCGAGGAGAAACTTCAGAAAGAAATGAAAGAGTCGGAA 227
* * * * **
consensus_13350#0 GTGGTGGCTAT--GGTGGAGGTCGCAGGGATAACTTCAG-AGATGGAGGAGGCCATGGGC 1193
consensus_13350#4 GTGGTGGCTAT--GGTGGAGGTCGCAGGGATAACTTCAA-AGATGGAGGAGGCCATGGGC 91
consensus_13350#2 GTGGTGGCTAT--GGTGGAGGTCGCAGGGATAACTTCAG-AGATGGAGGAGGCCATGGGC 246
consensus_13350#3 GTGGCGGCGGA--GGCGGCCGTGGGAGGGGAGGTGGCGG-AGGAGGAGGGGGA---GGAT 139
consensus_13350#1 AAAGCAATCAACGGAAAGAAGCCTGACGTCTATCTTCCGCAACTGTGATAGAAACCATAC 287
* * * * * * * * * *
consensus_13350#0 CTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGT 1253
consensus_13350#4 CTAACAGGCATCAAGGTGGTGGTTCACGCTCAAGGCCATACTGAAAGCAACTAATATAGT 151
consensus_13350#2 CTAACAGGCATCAAGGTGGTGGTTCGCGTTCAAGGCCATACTGAAAGCAACTAATATAGT 306
consensus_13350#3 ATGGT-GGTGGTGGTGTGGGAGGTGGATATGGTGGTGGTGGCGGAGGATATGGCGGCGGT 198
consensus_13350#1 AAAGAAACCAGATGAACTGGAGGTATCCACCGCAACTGTGACAAACCATACAAAGAAACC 347
* * * * * *
consensus_13350#0 TACTAA---GATTGTCATCTGTGAGAAACCATTTCTATTCCT-GTTCATCGGACTTGTAC 1309
consensus_13350#4 TACTAA---GATTGTCATCTGTGAGAAACCATTTCTATTCCT-GTCCATCGGACTTGTAC 207
consensus_13350#2 TACTAA---GATTGTCATCTGTGAGAAACCATTTCTATTCCT-GTTCATCGGACTTGTAC 362
consensus_13350#3 GGCGGA---GGGTA-CGGCGGCGGTGG--TAGAGGTGGCGGT-GGAGGAGGAGGCTACGG 251
consensus_13350#1 AGATGAACTGGAGGTATCCAGCCAACAGGTCAATTTGCCAATCAGCACAAGGAACTGGAT 407
* * * * * * * *
consensus_13350#0 TCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGG-AATTATATTCCATTGTCAT 1368
consensus_13350#4 TCAAAACAAGAGCGTAAGGTAGGTTGCCTGCTTTTCTCGG-AATTATATTCCATTGTCAT 266
consensus_13350#2 TCAAAACAAGAGCGTAAGATGGATAAGCTCCAAATGCTGGTAGTTTTGAGATGTTATTTC 422
consensus_13350#3 CGGCGGTGGCGGCGGCGGGAGAGGTGGCGGCGGGAGGGGTGGAGGACGTGACGGTGAC-T 310
consensus_13350#1 CCG----GAGGGCAGATACAAGGATGGCTTCGAG-GTTTCACAATACGCTGCAGTGATAG 462
** * * *
consensus_13350#0 ACTCCAATGTTGGTCGGATGTTTGTTTGT----CTC--ATCCAAAAAGTGATTGAT--CC 1420
consensus_13350#4 ACTCCAGTGTTGGTCGGATGTTTGTTTGT----CTC--ATCCAAAAAGTGATTGAT--CT 318
consensus_13350#2 AGGTGAGTGCCGATCTGTTATGATTCTGCAATGCTT--TGCTATCCCGTGATTGCTTACC 480
consensus_13350#3 GGGTTTGCCCAGACCCGAGTTGTGGCAATGTTNACT--TTNCAAAGAG-GACTGATTCCA 367
consensus_13350#1 AAGAGCAGGCAGCATCGATGTGCAGCAGACGGTGTTGGCTGCACACATTGTACAGCAGCA 522
* * * * * *
consensus_13350#0 ATGTTATGTGAATTTTTCCATAG---AGGCAGATGGATAAGCTCCAAATGCTGGTAGTTT 1477
consensus_13350#4 ATGTTATGTGAATTTTTCCAAAA---AAA------------------------------- 344
consensus_13350#2 TTTTTATTTCTGCGATTGCAAATTTTGCTATAACGCTTACATTCCACATGGTAACTCAGC 540
consensus_13350#3 CAAGTGT----------------------------------------------------- 374
consensus_13350#1 AGCCTGTTTCTCCTCGCCAAAATCCAAGCTAGTGATCCACCGGCTGAGTTACCATGTGGA 582
* *
consensus_13350#0 TGAGAAAAA--------------------------------------------------- 1486
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 CGGTGGATCACTAGCTTGGATTTTGGCGAGGAGAAACAGGTAGGGCATTTTTGTTCTTCG 600
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 ATGTAAGCGTTATAGCAAAATTTGCAATCGCAGAAATAAAAAGGTAAGCAATCACGGGAT 642
consensus_13350#0 ------------------------------------------------------------
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ATAGGTTTACTAGATCTAGAATCCATTAGTTACGGATATCTCTGTGGATATTAGATGTAT 660
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 AGCAAAGCATTGCAGAATCATAACAGATCGGCACTCACCTGAAATAACATCTCAAAACTA 702
consensus_13350#0 ------------------------------------------------------------
consensus_13350#4 ------------------------------------------------------------
consensus_13350#2 ATGAACCACCTTTTCTGGTACACATTCATTGACTTATTCATGTGGTTTGCGTCAAATAAA 720
consensus_13350#3 ------------------------------------------------------------
consensus_13350#1 CCAGCATTTGGAGCTTATCCATCTGCCTCTTACGCTCTTGTTTTGAGTACAAGTCCGATG 762
consensus_13350#0 ---------------------------------------------------
consensus_13350#4 ---------------------------------------------------
consensus_13350#2 GCAAGGATATGTTACTATTTAGATACTATTTCCAGACGATTAAAAGG---- 767
consensus_13350#3 ---------------------------------------------------
consensus_13350#1 AACAGGAATAGAAATGGTTTCTCACAGATGACAATCTTAGTAACTATATTA 813
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||