These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13363#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1875 fasta sequence [GAACAGGGAGCTAGCTAGACTTGGCACAGCACATCATCATCAGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG-TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC-TACATACAG-TGGAGGCTCT--CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGCTTCCCGCCGCCGACGCGCCGGGGATTCTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG-CTGGCGT-CATGTATGAGCCAGATTAGCGGTTGCTTT-GATATGTACTCTTCCATCCATGTGGG----TATATATATATATATATATATATATATATATATATATATATAT--GCACGAAGAAATAAAACTTAATTTGTTTGCCTATTAAAAA] [+] EMBL AK120738 [GAACAGGGAGCTAGCTAGACTTGGCACAGCACATCATCATCAGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGCTTCCCGCCGCCGACGCGCCGGGGATTCTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGG TATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAA ] [+] EMBL AK068441 [ GCACATCATCATCAGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGCTTCCCGCCGCCGACGCGCCGGGGATTCTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGGGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGATGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGGTATATATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAATTTG ] [+] EMBL OSS11328A [ AGTAGCACAGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGGCGTTCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGGGNCGACTTACATACAG TGGAGGTTTTTNCGGGTTCGGT ] [+] EMBL C93589 [ AGCACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTCCTGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAG CAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCG CG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCG GNCGAC TACATACAGTTGGAGGCTCT CCGGCTCGGTCGCC GCGTGCTTCAGCC GCCGACGACGTGCCGTTNTCAACTAACTACGANCAGCAGTCCATAGAAGGAGATCTTAA TATtgga ] [+] EMBL OSS1350A [ CACAAATACAGGAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAG ] [+] EMBL CB639017 [ GAGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGCTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCATCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAACGAGATCTTAACTATGGCACGTACTACCCTGCA ] [+] EMBL OSS11894A [ AGCGGCCCGGCTATGGCAATGGCTTGTGCAGCACTAGTGCCGTTGNTACTGTTGCTTCTTGTTGTGCTCTCTGGCTCTACATCTCTCGCTGACCACAGTGCAGGTGTAGATGAGGTCAACTACATCGTGGTGCTAACCAGCAGCTGGCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGNGCCGAC TACATACAG ] [+] EMBL CB684399 [ GCTCAAGCCAAATTCCGTCTGCTCCAGCCTGATGAGCCCACACCCCAACGTGACCAACTGGGTCCCGTTGAGCCGACCGTACGGGCCGTGCAGCTCCTCGCCGGCGAAGGGTAGGGCGGCGCCG TCCACCGTCGACGGCATGCTCTGGTCGGACCAGCACCGCGCCGAC TACATACAG TGGAGGCTCT CCGGCTCGGTCGCCGGCGTGCTGCAGCCGGCCGACGACGTGCCGGTGTCAACTAACTACGAACAGCAGTCCATAGAAGGAGATCTTAACTATGGCACGTACTACCCTGCACCTGCACCAATGTCATCAAAGGCGATGAATCCGGCCGCCACCGGCGGCGGCGGCGGCGGGCCGGGAGTGACCCAGACGATGGTGCTGGACACGGCGAGCGACGTGACATGGGTGCAGTGCTCGCCGTGCCCCACGCCGCCGTGCTACCCGCAAAAGGACGTCCTCTACGACCCCACCAAGTCGTCGTCGTCCGGCGTCTTCTCCTGCAACTCGCCGACGTGCACCCAGCTCGGCCCCTACGCCAATGGCTGCACCAACAATAACCAGTGCCAGTACCGCGTCCGGTACCCCGACGGCACGTCGACGGCGGGCACCTACATCTCCGACCTGCTGACCATCACCCCCGCCACCGCAGTCAGGAGCTTCCAGTTCGGCTGCAGCCACGGCGTGCAGGGCAGCTTCAGCTTCGGCAGCAGCGCCGCCGGGATCATGGCACTCGGCGGCGGGCCGGAGTCACTGGTGTCGCAGACGGCGGCGACCTACGGCCGCGTCTTCTCCCACTGC ] [+] EMBL CB675670 [ CTTCACCCTCGGCGTGCCGAGGGTGGCCGCCTGGAGGTACGTGCTGACGCCGATGCTCAAGAACCCGGCCATCCCGCCCACGTTCTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGCGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGCTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGCTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCAATCATGTGGG TATATATATATATATATATATA ] [-] EMBL CB675671 [ AAGAACCCGGCCATCCCGCCCACGTTTTACATGGTGCGCCTCGAGGCCATCGCCGTCGCCGGGCAGAGGATCGCCGTGCCGCCCACCGTGTTCGCCGCCGGCGCCGCGCTCGACTCCCGCACCGCCATCACCAGGGTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGCTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTCGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGGTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTCTACAACATCCCCCCCGCCCTCGTGGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGG TATATATATATATATATATATATATATATATATATATATATATAGGCACGAAGAAATAAAACTTAATTTGTTTGCCTA ] [-] EMBL CB684400 [ TCACCAGGGTGCCGCCGACGGCGTACCAGGCGCTGAGGCAGGCGTTCAGGGACCGGATGGCGATGTACCAGCCGGCGCCGCCCAAGGGCCCGCTCGACACCTGTTACGACATGGCCGGCGTCCGCAGCTTCGCGCTGCCGAGGATCACGCTTGTGTTTGACAAGAACGCCGCCGTCGAGCTCGATCCGTCGGGCGTCCTCTTCCAGGGGTGCCTCGCCTTCACCGCCGGCCCCAACGACCAGGTCCCCGGGATCATCGGCAACATCCAGCTTCAGACGCTCGAGGTGCTTTACAACATCCCCGCCGCCCTCGTCGGATTCCGCCATGCCGCCTGCTGAGTCCGGCCGCCGCCCCCGACGTCTCGATCGGGACTCTACTACTACAGGCCGGAGCTGCTCTTGCTCCGGTGATACCTTTTAATTTTCATAAAGCTCGAGCGCTCGCGTCTTTAATTTGATTCCTCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGG TATATATATATATATATATATATATATATATATATATATATAT GCACGAAGGAATAAAACTTAATTTGTTTGCCTATTAAAAA] [+] EMBL AU091859 [ CGTCTCGATCGGGACTNTACTACTACAGGCCGGAGCTGCTCTTGNTCCGGTGATACCTTTTAATTTTCATAAAGNTCGNGCGCTCGCGTCTTTANTTTGATNCCNCCTATTTATTTTTGCGTATGCGTACACGTGCTACAAGATCAGCTGG CTGGCGT CATGTATGAGCCAGATTAGCGGTTGCTTT GATATGTACTCTTCCATCCATGTGGGTATATATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAATTTGTTTGCCaaaaa ] [+] EMBL AU095866 [ TACACGTGCTACAAGATCAGCTGGNCTGGCGTNCATGTATGAGCCAGATTAGCGGTTGCTTTNGATATGTACTCTTCCATCCATGTGGGTATATATATATATATATATATATATATATATATATATATATATATAT GCACGAAGAAATAAAACTTAATTTGTTTGCCTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||