cluster # 13385

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Oryza sativa
cluster # 13385 cluster # 13385 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13385#0 length = 1944 sequences # 10

consensus_13385#1 length = 757 sequences # 1
consensus_13385#2 length = 348 sequences # 2

consensusID : consensus_13385#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1944
fasta sequence

                              [CAGCCTCCAAACCGCGCCCCCAAATTCCCCCTCTTCCGCCTCTCCGGCCGCCGCGTCGTACACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCCATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGGCCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAATGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATTGTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAATTGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGCCTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGATGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGATGGTACTGTTTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAATGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAAAGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGCCGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACATGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTCCAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATACTGACAGAGAAACAGGCAGAAAGAAAGGTGATGCGCTAGTGACCTACCTCAAGGAGCCTTCTGTAGCACTAGCAATTCAACTGTTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCTAATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTCAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATT-AAACTTTTTTTTTCCTGATTAACATGTTCGTTTTGACATATTAACTTCTACTTCTAGGCTTGTAGCAACTTGCTATCCT-CCTTGGTATGCATAAATCCACACTGATGATATCAAAAAAAAAAAA]

[+] EMBL AK111787             [CAGCCTCCAAACCGCGCCCCCAAATTCCCCCTCTTCCGCCTCTCCGGCCGCCGCGTCGTACACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCCATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGGCCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAATGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATTGTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAATTGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGCCTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGATGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGGTGATGGTACTGTTTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAATGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAAAGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGCCGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACATGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTCCAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATACTGACAGAGAAACAGGCAGAAAGAAAGGTGATGCGCTAGTGACCTACCTCAAGGAGCCTTCTGTAGCACTAGCAATTCAACTGTTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCTAATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATT AAACTTTTTTTTTCCTGATTAACATGTTCGTTTTGACATATTAACTTCTACTTCTAGGCTTGTAGCAACTTGCTATCCT CCTTGGTATGCATAAATCCACAC                      ]
[+] EMBL CB672535             [        AAACCGCGTCCCCAAATTCCCCCTCTTCCGCCTCTCCGGCCGCCGCGTCGTACACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCCATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGGCCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAATGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATTGTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAATTGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGCCTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGATGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGATGGTACTGTTTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAATGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTCTCTGCCGAAATTGAAATCAAAGAACCCACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGCCGATAAga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSC104441            [                                CTTCCGCCTCTCCGGCCGCCGCGTCGTACACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCCATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTNCTCGGACCGAACCAGGAGCACGTCGGCCCCTACGCGNTCTCCGAGCTGCGAGAACATTTTGATAATGGGTACATCAGTGAGAGCTCAATGCTCTNGGCAGAAGGGAGGAGTNAATGGATGCCATTGTCGTCGATTNCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB641742             [                                                      GTCGTACACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCCATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGGCCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAATGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATTGTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAATTGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGCCTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGATGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGATGGTACTGTTTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAATGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAAAGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGCCGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACATGTCTACGTTACTGGTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AY224465             [                                                                                                                                                       GGCGGCGAGGTGGGCTGGTACGTGCTCGGCCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAATGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATTGTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAATTGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGCCTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGATGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGATGGTACTGTTTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAATGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCGGAAATTGAAATCAAAGAACCACCAAAGGTAGAAAAGAGAGCACATAAGAAGCGGAAGTCTTCTGAAAAGCCAGCCGATAAAAAGGAAGCTTACAAACCTCCAGATAGTTGGGTTGATCTCAAAGTTAACACACATGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTCCAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATACTGACAGAGAAACAGGCAGAAAGAAAGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BP185007             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            acgaggCTTTTGCACATGAGGAAGAAGTTTTCCAAGCACCAGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAAAGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGCCGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACATGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTCCAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATACTGACAGAGAAACAGGCAGAAAGAAAGGTGATGCGCTAGTGACCTACCTCAAGGAGCCTTCTGTAGCACTAGCAATTCAACTGTTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCTAATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB672536             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTGTTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCTAATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATTAAAAATGTTTTTTTCCTGATTAACATGTTCG TTTGACAAAATAAaaga                                                                             ]
[-] EMBL CB621221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAATTTGAGCAGAAAGGGGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTCAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTCCAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATT AAAC TTTTTTTTCCTGATTAACATGTT                                                                                                 ]
[+] EMBL CA766863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTCAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACACTATATAGATT AAACTTTTTTTTcc                                                                                                               ]
[-] EMBL CA762752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTCAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACTGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGTTGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGAT  ACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTGGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATT AAAC TTTTTTTTCCTGATTAACATGTTCGTTTTGACATATTAACTTCTACTTCTAGGCTTGTAGCAACTTGCTATCCTCCCTGGGTATGCATAAATCCACACTGATGATATCAAAAAAAAAAAA]




>consensus_13385#0
CAGCCTCCAAACCGCGCCCCCAAATTCCCCCTCTTCCGCCTCTCCGGCCGCCGCGTCGTA
CACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCC
ATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGG
CCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAA
TGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATT
GTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAAT
TGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGC
CTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGA
TGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGATGGTACTGT
TTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAA
TGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACC
AGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAA
AGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGC
CGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACA
TGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTC
CAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATAC
TGACAGAGAAACAGGCAGAAAGAAAGGTGATGCGCTAGTGACCTACCTCAAGGAGCCTTC
TGTAGCACTAGCAATTCAACTGTTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCT
AATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGAC
AGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGG
ACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCC
TGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTCAGAGAAGA
ATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGT
TATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGG
AAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGC
TCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGA
AGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGA
TCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGC
TAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTC
CATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGT
ACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAACATGTTCGTTTTGACATA
TTAACTTCTACTTCTAGGCTTGTAGCAACTTGCTATCCTCCTTGGTATGCATAAATCCAC
ACTGATGATATCAAAAAAAAAAAA

consensusID : consensus_13385#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 757
fasta sequence

                              [GGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTACAAAAAAAAAG]

[-] EMBL CB641743             [GGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGAATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTACAAAAAAAAAG]




>consensus_13385#1
GGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGACAGATAAGCAAAAGAA
AAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGGACATGATGACAAGAA
GGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCCTGCTGAATTGCGAGC
CGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGAATGCATGAAGCTTGG
TCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGTTATTTTGGTGAAATT
CAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGGAAGATGGTTTGGTGG
GAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTA
TGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCA
CGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGTTTAA
TATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGA
GAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAA
TCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATAT
AGATTAAACTTTTTTTTTCCTGATTACAAAAAAAAAG

consensusID : consensus_13385#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 348
fasta sequence

                              [GAGTAGAAACGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCGGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAAAAAAA]

[+] EMBL CF327331             [GAGTAGAAACGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCGGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAAAAAA ]
[-] EMBL CF327330             [                  ATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATGCGGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGATCATTAATGCTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTCCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGTACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAAAAAAA]




>consensus_13385#2
GAGTAGAAACGAGTGAAGATGACGGTTCTATCAACCATGCTCTGATCCGTGATTATGATG
CGGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGAAGAGTCCACATAGCACGTCG
ATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGATCAACTGGCGATCATTAATG
CTAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTT
CCATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAG
TACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13385#0      CAGCCTCCAAACCGCGCCCCCAAATTCCCCCTCTTCCGCCTCTCCGGCCGCCGCGTCGTA 60
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      CACAACCTCGCGCCGGTGAGCGGCGGCGCCGACGAAGCAGGACTCCCTCCGCCCAGCCCC 120
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      ATTCTCCCGCGTGGGGGGATCCATGGAGGGCGGCGGCGAGGTGGGCTGGTACGTGCTCGG 180
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      CCCGAACCAGGAGCACGTCGGCCCCTACGCGCTCTCCGAGCTGCGAGAACATTTTGCTAA 240
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGGGTACATCAGTGAGAGCTCAATGCTCTGGGCAGAAGGGAGGAGTGAATGGATGCCATT 300
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      GTCGTCGATTCCTGACCTACTTGCGGTGGTCACAAAAAAGGATCAACCTGATGAAGGAAT 360
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGAAGATGATTTCGATAAATTTCAAAAGGAGGTTATAGAAGCTGAGGCAGAGGTGGAAGC 420
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      CTCGACAGACAAGGCTGCAGATAACGACATAAACCAAGAACATGGGGCCGATGATCCTGA 480
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGACCGGCCAGCAACCCCACCAGATGGCGAGGACGAATTTACTGATGATGATGGTACTGT 540
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TTACAAGTGGGATCGTGTCCTGAGGGCATGGGTTCCTCAAGATGACCTAGAAGGCAAAAA 600
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGACAACTATGAAGTTGAAGACATGACTTTTGCACATGAGGAAGAAGTTTTCCAAGCACC 660
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      AGATATTGCTGGTTCAACCACATTAGAAGAAAACAATGTTTCTGCCGAAATTGAAATCAA 720
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      AGAACCAACAAAGGTAGAAAAGAGAGCAGATAAGAAGCGGAAGTCTTCTGAGAAGCCAGC 780
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      CGATAAAAAGGAAGCTAACAAACCTCCAGATAGTTGGTTTGATCTCAAAGTTAACACACA 840
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGTCTACGTTACTGGTTTGCCTGATGATGTCACAGCTGAGGAGATTGTGGAGGTATTTTC 900
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      CAAATGTGGAATTATAAAGGAGGACCCAGAGACAAGAAAACCCCGAGTAAAAATCTATAC 960
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGACAGAGAAACAGGCAGAAAGAAAGGTGATGCGCTAGTGACCTACCTCAAGGAGCCTTC 1020
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGTAGCACTAGCAATTCAACTGTTGGATGGGACATCATTTCGCCCTGGTGGTAAGACTCT 1080
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      AATGTCTGTTAGCCCGGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGAC 1140
consensus_13385#1      ---------------GGCCAAATTTGAGCAGAAAGGTGATGTTTTCATTTCTAAGAAGAC 45
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      AGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGG 1200
consensus_13385#1      AGATAAGCAAAAGAAAAGGAAAACCAAGAAAGTTGAGGATAAAATTCTAGGATGGGGTGG 105
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      ACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCC 1260
consensus_13385#1      ACATGATGACAAGAAGGTGACGATTACAACTACAGTTATTTTGAGGCATATGTTCACTCC 165
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTCAGAGAAGA 1320
consensus_13385#1      TGCTGAATTGCGAGCCGATGAAACTCTTCTTCCCGAGCTTGAGGCAGATGTTAGAGAAGA 225
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      ATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGT 1380
consensus_13385#1      ATGCATGAAGCTTGGTCCAGTTGATAATGTCAAGGTCTGTGAAAATCATCCAGAGGGTGT 285
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      TATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGG 1440
consensus_13385#1      TATTTTGGTGAAATTCAAAGACCGGAAAGATGGTATCAAATGCATAGAGAAGATGAATGG 345
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      AAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGC 1500
consensus_13385#1      AAGATGGTTTGGTGGGAATCAAATCCAGGCGAGTGAAGATGACGGTTCTATCAACCATGC 405
consensus_13385#2      --------------------GAGTAGAAACGAGTGAAGATGACGGTTCTATCAACCATGC 40
                                            * *  *  *******************************

consensus_13385#0      TCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGA 1560
consensus_13385#1      TCTGATCCGTGATTATGATGCAGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGA 465
consensus_13385#2      TCTGATCCGTGATTATGATGCGGAGGTGTCAAGGCTTGATCGATTTGGAGAAGAGTTAGA 100
                       ********************* **************************************

consensus_13385#0      AGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGA 1620
consensus_13385#1      AGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGA 525
consensus_13385#2      AGAGTCCACATAGCACGTCGATAAACTGGCGATTAATATTACTCTGCAGCTGATGGTCGA 160
                       ************************************************************

consensus_13385#0      TCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGC 1680
consensus_13385#1      TCAACTGGCGTTTAATATTGCTCTGTAGCTGATGGTCGATCAACTGGCGATCATTAATGC 585
consensus_13385#2      TCAACTGGCG---------------------------------------ATCATTAATGC 181
                       **********                                       ***********

consensus_13385#0      TAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTC 1740
consensus_13385#1      TAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTC 645
consensus_13385#2      TAGCTGATAGCATGAGAGTACAAAGTTTTACAGTTAGCTCTTTGCGTAGGTTGGATCTTC 241
                       ************************************************************

consensus_13385#0      CATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGT 1800
consensus_13385#1      CATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGT 705
consensus_13385#2      CATTTGCCATGTTAATCTTATCAAAACTGCTTCTGGGTTTTACCTTCTATCACCACCAGT 301
                       ************************************************************

consensus_13385#0      ACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAACATGTTCGTTTTGACATA 1860
consensus_13385#1      ACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTACAAAAAAAAAG-------- 757
consensus_13385#2      ACGTGTACATTATATAGATTAAACTTTTTTTTTCCTGATTAAAAAAA------------- 348
                       *****************************************  *                

consensus_13385#0      TTAACTTCTACTTCTAGGCTTGTAGCAACTTGCTATCCTCCTTGGTATGCATAAATCCAC 1920
consensus_13385#1      ------------------------------------------------------------
consensus_13385#2      ------------------------------------------------------------
                                                                                   

consensus_13385#0      ACTGATGATATCAAAAAAAAAAAA 1944
consensus_13385#1      ------------------------
consensus_13385#2      ------------------------