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Oryza sativa
cluster # 13393 cluster # 13393       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13393#0 length = 1083 sequences # 5  
consensus_13393#1 length = 622 sequences # 8  

consensusID : consensus_13393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1083
fasta sequence
                              [ACTGATTTATCGATCGATGTAGAAGCCCTATATATAAAAGCAGAGCCTATCCCTCATCGCTGAGCCACACGCACAAACTGCACAATCAAATCAAGCGTTGGAGAGAGGAAGAAGGTAAGCTAAGCAAAGCAAGCAAAGCTAGAGAGAAAGTGACAGCAGCAATGGCGGGGGGCGAGCTTGTGCTGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTGCCGCATCGCGCTGGCGGAGAAGAAGCTCCCCTACGACTACTCCGAGCAGGAGCTCCTCGGCGCCAAGAGCGACCTCCTCCTCCGCTCCAACCCCATCCACGCCAAGGTCCCCGTCCTCCTCCACGGCGACGGAGACGGCCGCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGACGACGCCTTCCCGGACGCCACCCCTCGCCTCCTCCCCTCCGCCGCCGACGACCCGTACGCGCGCGCCCGGGCCAGGTTCTGGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGGGGGAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGTTTGGGTTTGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAGCGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCGTCGCCGGCAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCTCCTCAGGAAGCACTACGGCATCGACGACTAGCTACGCTATTGTGTGTACACCTTAATTTGGTTGTTATTATTACTGCTATTTACTCATTTAACTACTTGTCGTAATTAATCAAGGTCGTTCAAAATAACTTGTTTAATTTCGCCGGCTGGCAGGTTCAAGTAATTTGTATTTGAAGTTTACAAGCGTAAACTGTACTCTCCGATCATTACTTTACACTTTAAAAGAATTAAGAAATAAGAAAGATAGATTCACC]

[+] EMBL AK069604             [ACTGATTTATCGATCGATGTAGAAGCCCTATATATAAAAGCAGAGCCTATCCCTCATCGCTGAGCCACACGCACAAACTGCACAATCAAATCAAGCGTTGGAGAGAGGAAGAAGGTAAGCTAAGCAAAGCAAGCAAAGCTAGAGAGAAAGTGACAGCAGCAATGGCGGGGGGCGAGCTTGTGCTGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTGCCGCATCGCGCTGGCGGAGAAGAAGCTCCCCTACGACTACTCCGAGCAGGAGCTCCTCGGCGCCAAGAGCGACCTCCTCCTCCGCTCCAACCCCATCCACGCCAAGGTCCCCGTCCTCCTCCACGGCGACGGAGACGGCCGCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGACGACGCCTTCCCGGACGCCACCCCTCGCCTCCTCCCCTCCGCCGCCGACGACCCGTACGCGCGCGCCCGGGCCAGGTTCTGGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGGGGGAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGTTTGGGTTTGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAGCGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCGTCGCCGGCAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCTCCTCAGGAAGCACTACGGCATCGACGACTAGCTACGCTATTGTGTGTACACCTTAATTTGGTTGTTATTATTACTGCTATTTACTCATTTAACTACTTGTCGTAATTAATCAAGGTCGTTCAAAATAACTTGTTTAATTTCGCCGGCTGGCAGGTTCAAGTAATTTGTATTTGAAGTTTACAAGCGTAAACTGTACTCTCCGATCATTACTTTACACTTTAAAAGAATTAAGAAATAAGAAAGATAGATTCAC ]
[+] EMBL AK105890             [                                                                             CTGCACAATCAAATCAAGCGTTGGAGAGAGGAAGAAGGTAAGCTAAGCAAAGCAAGCAAAGCTAGAGAGAAAGTGACAGCAGCAATGGCGGGGGGCGAGCTTGTGCTGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTGCCGCATCGCGCTGGCGGAGAAGAAGCTCCCCTACGACTACTCCGAGCAGGAGCTCCTCGGCGCCAAGAGCGACCTCCTCCTCCGCTCCAACCCCATCCACGCCAAGGTCCCCGTCCTCCTCCACGGCGACGGAGACGGCCGCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGACGACGCCTTCCCGGACGCCACCCCTCGCCTCCTCCCCTCCGCCGCCGACGACCCGTACGCGCGCGCCCGGGCCAGGTTCTGGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGGGGGAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGTTTGGGTTTGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAGCGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCGTCGCCGGCAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCTCCTCAGGAAGCACTACGGCATCGACGACTAGCTACGCTATTGTGTGTACACCTTAATTTGGTTGTTATTATTACTGCTATTTACTCATTTAACTACTTGTCGTAATTAATCAAGGTCGTTCAAAATAACTTGTTTAATTTCGCCGGCTGGCAGGTTCAAGTAATTTGTATTTGAAGTTTACAAGCGTAAACTGTACTCTCCGATCATTACTTTACACTTTAAAAGAATTAAGAAATAAGAA             ]
[+] EMBL OSS11472A            [                                                                                               CGTTGGAGAGAGGAAGAAGGTAAGCTAAGCAAAGCAAGCAAAGCTAGAGAGAAAGTGACAGCAGCAATGGCGGGGGGCGAGCTTGTGCTGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTNCCGCATCGCGCTNGCGGAGAAGAAGCTCCCCTACGACTACTNCGAGCAGGAGCTNCTCGGCGCCAAGAGCGACCTTCTTCTTCGNTTCAACCCCATNCACGGCAAGGTNCCCGTCCTTCTTCACGGCGACGGAGACGGCCGCG CGTCTttcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB665723             [                                                                                                                                                                                       TGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTGCCGCATCGCGCTGGCGGAGAAGAAGCTCCCCTACGACTACTCCGAGCAGGAGCTCCTCGGCGCCAAGAGCGACCTCCTCCTCCGCTCCAACCCCATCCACGCCAAGGTCCCCGTCCTCCTCCACGGCGACGGAGACGGCCGCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGACGACGCCTTCCCGGACGCCACCCCTCGCCTCCTCCCCTCCGCCGCCGACGACCCGTACGCGCGCGCCCGGGCCAGGTTCTGGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGGGGGAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGTTTGGGTTTGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAGCGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCGTCGCCGGCAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCTCCTCAGGAAGCACTACGGCATCGACGACTAGCTACGCTATTGTGTGTACACCTTAATTTGGTTGTTATTATTACTGCTATTTACTCATTTAACTACTTGTCGTAAT                                                                                                                                                    ]
[-] EMBL CB665724             [                                                                                                                                                                                                                                                                                                                                       TCCCCGTCCTCCTCCACGGCGACGGAGACGGCCGCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGAGGACGCCTTCCCGGACGCCACCCCTGGCCTCCTCCCTTCCGCCGCCGANGACCCGTACGCGCGCGCCCGGGCCAGGTTCTGGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGGGGGAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGTTTGGGTTTGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAGCGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCGTCGCCGGCAGCCTCCGCTCGCCGGAGGAGATTTACGACTTCATCGGCCTCCTCAGGAAGCACTACGGCATCGACGACTAGCTACGCTATTGTGTGTACCCCTTAATTTGGTTGTTATTATTACTGCTATTTACTCATTTAACTACTTGTCGTAATTAATCAAGGTCGTTCAAAATAACTTGTTTAATTTCGCCGGCTGGCAGGTTCAAGTAATTTGTATTTGAAGTTTACAAGCGTAAACTGTACTCTCCGATCATTACTTTACACTTTAAAAGAATTAAGAAATAAGAAAGATAGATTCCCC]


>consensus_13393#0 ACTGATTTATCGATCGATGTAGAAGCCCTATATATAAAAGCAGAGCCTATCCCTCATCGC TGAGCCACACGCACAAACTGCACAATCAAATCAAGCGTTGGAGAGAGGAAGAAGGTAAGC TAAGCAAAGCAAGCAAAGCTAGAGAGAAAGTGACAGCAGCAATGGCGGGGGGCGAGCTTG TGCTGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTGCCGCATCGCGCTGGCGGAGA AGAAGCTCCCCTACGACTACTCCGAGCAGGAGCTCCTCGGCGCCAAGAGCGACCTCCTCC TCCGCTCCAACCCCATCCACGCCAAGGTCCCCGTCCTCCTCCACGGCGACGGAGACGGCC GCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGACGACGCCTTCCCGGACGCCA CCCCTCGCCTCCTCCCCTCCGCCGCCGACGACCCGTACGCGCGCGCCCGGGCCAGGTTCT GGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGG GGGAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGA CGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGTTTGGGTTTGTGGACG TGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAGCG TGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCG TCGCCGGCAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCTCCTCAGGAAGC ACTACGGCATCGACGACTAGCTACGCTATTGTGTGTACACCTTAATTTGGTTGTTATTAT TACTGCTATTTACTCATTTAACTACTTGTCGTAATTAATCAAGGTCGTTCAAAATAACTT GTTTAATTTCGCCGGCTGGCAGGTTCAAGTAATTTGTATTTGAAGTTTACAAGCGTAAAC TGTACTCTCCGATCATTACTTTACACTTTAAAAGAATTAAGAAATAAGAAAGATAGATTC ACC



consensusID : consensus_13393#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 622
fasta sequence
                              [GACAAGAAGGTGTACCCGGT-GGGAC-CGGCTGTGGAA-GTGAAGGGGGATGATGAGGAGGGCGTCCGCGC-GC-GTC-C-GCGGCGCGCGGCGAGCTGGT-GGAGGCGCTGCGGACG-CTC-GACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGGAGGAGTTTGGGTTGGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGG-C-GCGGCGGTG-CA-TGGAGCGGGACAGCGTCG-CC-GGGAGCCT-CC-GCTC-G-CCGGAGGAGATC-TACGAC-TTCATCGGCCTTCTCAGGAAGCA-CTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC-CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT--TTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAATAACTT-GTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTATAAAATTGTGTCAACCTGTACTCTCCGATCATCACTTTGCACTTGAAAAAAATTAAGAAAGAAATTCACCTTCCTGTTCAAAAAAA]

[+] EMBL CB628955             [GACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTGAAGGGGGATGATGAGGAGGGCGTCCGCGCGGCGGTCGCGGCGGCGCGCGGCGAGCTGGT GGAGGCGCTGCGGACG CTC GACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGGAGGAGTTTGGGTTGGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGG C GCGGCGGTG CA TGGAGCGGGACAGCGTCG CC GGGAGCCT CC GCTC G CCGGAGGAGATC TACGAC TTCATCGGCCTTCTCAGGAAGCA CTACGGCATCGACGACTAGCCTAACTAGCTAGC                                                                                                                                                                                                                                              ]
[-] EMBL CB628956             [ ACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTGAAGGGGGATGATGAGGAGGGCGTCCGCGCGGCGGTCGCGGCGGCGCGCGGCGAGCTGGT GGAGGCGCTGCGGACG CTC GACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGGAGGAGTTTGGGTTGGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGG C GCGGCGGTG CA TGGAGCGGGACAGCGTCG CC GGGAGCCT CC GCTC G CCGGAGGAGATC TACGAC TTCATCGGCCTTCTCAGGAAGCA CTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT  TTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCA                                                                                                                                                  ]
[+] EMBL BI812157             [            TACCCGGT GGGAC C GCT TGGAA GTGAAGGGGGATGATGAGGAGGGCGTCCGCGC GC GTC C GCGGCGCGCGGCGAGCTGGT GGAGGCGCTGC GACG CTC GACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGGAGGA TTT GGTTGGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGG CACCGGCGGTG CA TGGAGCGGGACAGCGTCG CC GGGAGCCT CC GCTC G CCGGAGGAGATC TACGAC TTCATCGGCCTTCTCAGGAAGCA CTACGGCATCGACCACTAGCCTAACTAGCTAGCTACTGTGTGTACACACTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT  TTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAATAACTT GTTTAATTTCGCCGGCCGGGCAGGTTCACGCCGTTTGTATTTGAAGTTTAAAAA                                                                                  ]
[+] EMBL BI811756             [             ACCC GT  GGAC CGCCTGTGGAA GTGAAGGGGATTGATGAGGA GGC TCCGC C GC GTC C GCGGCGC C GCGAGCTGGT GGAGGC CT CGGACG CTC GACGGCGAGCTCGGGGAGAAGGAATTCTTC GCGGCGAGGAGGAGTTTGGGTTGGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGGAGGAGTGCCC CGGGTGGCGGCGTGGG C GC GCGGTG CA TGGAGCGGGACAGCGTCG CC GGGAGCCT CC GCTC G CCGGAGGAGATC TACGAC TTCATCGGCCTTCTCAGGAAGCA CTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT  TTATTTACTACTTGTCGTAGTTAATC ACGTCGTTCAAAATAACTT GTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTATAAAATTGTGTC ACCTGTACTCTCCGATCATCACTTTGCACTTGAAAAAAATTAAGAAAGAAATTCACCTTCCTGTTCAAAAAAA]
[+] EMBL BM038849             [                                                                                                 TGGTGGGAGCCCCTGCGTACGCCTCTGACCGCGAGCTCGGGGAGAAGGAATTCTTC GC GCGAGGAGGA TTTGGGTT GTGGACGTGGCGCT GTGCCGATGAT CCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGG C GC GCGGTG CA TGGAGCGGGACAGCGTCG CC GGGAGCCT CC GCTC G CCGGAGGAGATC TACGAC TTCATCGGCCTTCTCAGGAAGCACCTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATTCNCTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAATAACTT GTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTATAAAATTGTGTCAACCTGTACTCTCCGATCATCACTTTGCACTTGAAACCNATTAAGAAAGAAATTCACCTTCCaaaaa       ]
[+] EMBL BQ905991             [                                                                                                                                                                                                                                                                       cgtccgGGCGTGGGTC GCGGCGGTG CA TGGAGCGGGACAGCGTCG CCAGGGAGCCT CCAGCTCTG CCGGAGGAGATCGTACGAC TTCATCGGCCTTCTCAGGAAGCA CTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT  TTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAATAACTTCGTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTATAAAATTGTGTCAACCTGTACTCTCCGATCATCACTTTGCACTTGAAAAAAATTAAGAAAGAAATTCAaaaaaa            ]
[+] EMBL BQ906043             [                                                                                                                                                                                                                                                                                           cCGGTGCCACTGGAGCGGGACAGCGTCGCCC GGGAGCCT CC GCTC GCCCGGAGGAGATC TACGAC TTCATCGGCCTTCTCAGGAAGCA CTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT  TTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAATAACTT GTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTATAAAATTGTGTCAACCTGTACTCTCCGATCATCACNTTGCACTTG  AAAAATTAAGAAAGAAAaaaa                  ]
[+] EMBL BI811975             [                                                                                                                                                                                                                                                                                                                  CGTC  CC  GGAGCCTCCC GCTC G CCGGAGGAGATC TACGACGTTCATCGGCCTTCTCAGGAAGCATCTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACAC CTTAATTTAAATTTGGTTGTTACTGTCATTTACTCATT  TTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAATAACTT GTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTAAAAA                                                                                  ]


>consensus_13393#1 GACAAGAAGGTGTACCCGGTGGGACCGGCTGTGGAAGTGAAGGGGGATGATGAGGAGGGC GTCCGCGCGCGTCCGCGGCGCGCGGCGAGCTGGTGGAGGCGCTGCGGACGCTCGACGGCG AGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGGAGGAGTTTGGGTTGGTGGACGTGGCGC TGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGGCGGGTTCAACGTGGAGG AGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGAGCGGGACAGCGTCGCCG GGAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCTTCTCAGGAAGCACTACG GCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACACCTTAATTTAAATTTGGTT GTTACTGTCATTTACTCATTTTATTTACTACTTGTCGTAGTTAATCAACGTCGTTCAAAA TAACTTGTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTGTATTTGAAGTTTATAAA ATTGTGTCAACCTGTACTCTCCGATCATCACTTTGCACTTGAAAAAAATTAAGAAAGAAA TTCACCTTCCTGTTCAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13393#0      ACTGATTTATCGATCGATGTAGAAGCCCTATATATAAAAGCAGAGCCTATCCCTCATCGC 60
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      TGAGCCACACGCACAAACTGCACAATCAAATCAAGCGTTGGAGAGAGGAAGAAGGTAAGC 120
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      TAAGCAAAGCAAGCAAAGCTAGAGAGAAAGTGACAGCAGCAATGGCGGGGGGCGAGCTTG 180
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      TGCTGCTGGACTTCTGGGCGAGCCCGTTCGGGCAGCGGTGCCGCATCGCGCTGGCGGAGA 240
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      AGAAGCTCCCCTACGACTACTCCGAGCAGGAGCTCCTCGGCGCCAAGAGCGACCTCCTCC 300
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      TCCGCTCCAACCCCATCCACGCCAAGGTCCCCGTCCTCCTCCACGGCGACGGAGACGGCC 360
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      GCGCCGTCTGCGAGTCCCTCGCCATCCTCGAGTACCTCGACGACGCCTTCCCGGACGCCA 420
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      CCCCTCGCCTCCTCCCCTCCGCCGCCGACGACCCGTACGCGCGCGCCCGGGCCAGGTTCT 480
consensus_13393#1      ------------------------------------------------------------
                                                                                   

consensus_13393#0      GGGCCGACTACGTCGACAAGAAGGTGTACCCGGTGGGGACGCGGCTGTGGAAGGTCAAGG 540
consensus_13393#1      --------------GACAAGAAGGTGTACCCGGTGGGACCG--GCTGTGGAAGTGAAGGG 44
                                     ***********************  **  **********   * **

consensus_13393#0      GG-----GAGGAGGGCGTACGCGCGGCGGCGGGGGCGCGCGGCGAGCTGGTGGAGGCGCT 595
consensus_13393#1      GGATGATGAGGAGGGCGTCCGCGCG-CGTCCGCGGCGCGCGGCGAGCTGGTGGAGGCGCT 103
                       **     *********** ****** ** * * ***************************

consensus_13393#0      GCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAG------TTTGG 649
consensus_13393#1      GCGGACGCTCGACGGCGAGCTCGGGGAGAAGGAATTCTTCGGCGGCGAGGAGGAGTTTGG 163
                       *************************************************      *****

consensus_13393#0      GTTTGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGG 709
consensus_13393#1      GTTGGTGGACGTGGCGCTGGTGCCGATGATGCCGTGGGTGTACAGCTTCGCGAGGTACGG 223
                       *** ********************************************************

consensus_13393#0      CGGGTTCAGCGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGA 769
consensus_13393#1      CGGGTTCAACGTGGAGGAGGAGTGCCCGCGGGTGGCGGCGTGGGCGCGGCGGTGCATGGA 283
                       ******** ***************************************************

consensus_13393#0      GCGGGACAGCGTCGCCGGCAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCT 829
consensus_13393#1      GCGGGACAGCGTCGCCGGGAGCCTCCGCTCGCCGGAGGAGATCTACGACTTCATCGGCCT 343
                       ****************** *****************************************

consensus_13393#0      CCTCAGGAAGCACTACGGCATCGACGACTAGCT--AC------GCTATTGTGTGTACACC 881
consensus_13393#1      TCTCAGGAAGCACTACGGCATCGACGACTAGCCTAACTAGCTAGCTACTGTGTGTACACC 403
                        *******************************   **      **** ************

consensus_13393#0      TTAATTTGGTTGTTATTATTACTGCTATTTACTCATTTAA----CTACTTGTCGTAATTA 937
consensus_13393#1      TTAATTTAAATTTGGTTGTTACTGTCATTTACTCATTTTATTTACTACTTGTCGTAGTTA 463
                       *******   * *  ** ******  ************ *    ************ ***

consensus_13393#0      ATCAAGGTCGTTCAAAATAACTTGTTTAATTTCGCCGGCTGG-CAGGTTCAAGTAATTTG 996
consensus_13393#1      ATCAACGTCGTTCAAAATAACTTGTTTAATTTCGCCGGCCGGGCAGGTTCAAGTAGTTTG 523
                       ***** ********************************* ** ************ ****

consensus_13393#0      TATTTGAAGTTTACAA----GCGTAAAC-TGTACTCTCCGATCATTACTTTACACTTTAA 1051
consensus_13393#1      TATTTGAAGTTTATAAAATTGTGTCAACCTGTACTCTCCGATCATCACTTTGCACTTGAA 583
                       ************* **    * ** *** **************** ***** ***** **

consensus_13393#0      AAGAATTAAGAAATAAGAAAGATAGATTCACC------- 1083
consensus_13393#1      AAAAATTAAGAAAGAAATTCACCTTCCTGTTCAAAAAAA 622
                       ** ********** **           *   *       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)