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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13403#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2288 fasta sequence
[GCGGCGGCGGCGCTCTGCTCCGCCTCCCCGGCCATCTCCACGGCGGCAGCTCTCGGCGACGGCGTGGCCACGCTCCGCCTCGCGGTCCTACTGCGCCTTCGCCTCTCCACCGCGGGCTGTGGGCTGTGGCTGCGGTGGGGACCCCATCCTGGCAGGCGCGTCGGCGGCTTCCACGACTACGGAGGAAGAGGGATCAGGTGTTAGAGATGATGATCCCGACGGCTTCCTCCGCTCCGAGAAGGATCGAAAGTGCGGTATCTGAAGAGTCACATGATGACCGCACAGAGAATGAACATATTATACATGACCATGAACACCGTCATCACCATCATCATCATGAGTTCATGACCATGAACACAAACATGATCATCATGCACACGAGCATACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGCAAAGGGGAGATGGATCTTGAAAAGGGAGTGCACATCATTTTCCGGGGAAGAATAATGTGGGAACCAAATGAGCCATGCATCAACAAGATTGTATTCATAGTCAATAATCTCAAATGGGGAAGAACTGGAGAAACGGCTTCAAAGATTGCCTACTCTACTGAAGGAATAAGCGAGAAACGGGACTCCAACAGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAGCAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGCCTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCCACTGCGACCCCCCTTCAGACGGGCGTGGACTAGATCATCCATCGCACCAAAGGTGGTGGACAGCCGAGCCTCCAGATCTGCGCGGTCCGTGTACATTGGGATACCTGAGAGGATCAAGGACCTGTCCGGGAAGCTGCTGCTCCAGACGGTAGCAGGGTTCGCGAGAGCACACAGCGCGATGAGCTTGTGCACGATCCGTCTGGCCTCGACCACCCTGTTCACATGGTATCCTGGTCCTGGAGACATCAACTCGTCGGATAGCCAGTTCTTGGCTTGGCAGTAGGCCACGGGACCCGCCCAGTCCCTCGTGCTGAAGCTGAGCTGCTGCGGCGGCTGCTGCGGCGGCGGCGTCAGGAACCGGGAAACGTGCAGCCATGTCATCATCAGACAGTGAGGAGAAAGCCCCCATCTCATCTCATCATCATCATCATCATCACCCCATCTCATCCCAGGAGCGTGCAGCCATGTCTCGGGAGGCTCCTGCAGCAGAAGCTCGACATCCTCCGGACTCCCGAGCACGACCACCACGACACCCATGGCCCTGTGGATCACGACGGCCTCCACCTGGTGCCTCAGCTCCACCCGGTGCTCCAGCCAGTCGGCGATCTGGGCCGCGTCACACTGCCACCGCTCTGTGCCCAGCCCTCTCAGCAGAATCACCCGGCTCCTGTACTCTTCCTGCTGCGCCGCCGCCGCCTGCGTGATCACGTACGGCGGAAGCAGGAGACGGAGCAAGGACGACGTGCCACCCTCGTCCGGGAGCAGCAGCGAGGAGGAGTCCAGCATCCGGAGGCCCGTCCTGACGAGCAACCGCGGCGCCCTCCTGGCAACCAACTCCGTGGCGTCCGCGTCGTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACGCCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGAACAAATCCACATTCACATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACAAAATGTAACTAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATAAAAAGCGCAGAATCATGCCCTTGAAAAAAAAAA]
[+] EMBL AK102006 [GCGGCGGCGGCGCTCTGCTCCGCCTCCCCGGCCATCTCCACGGCGGCAGCTCTCGGCGACGGCGTGGCCACGCTCCGCCTCGCGGTCCTACTGCGCCTTCGCCTCTCCACCGCGGGCTGTGGGCTGTGGCTGCGGTGGGGACCCCATCCTGGCAGGCGCGTCGGCGGCTTCCACGACTACGGAGGAAGAGGGATCAGGTGTTAGAGATGATGATCCCGACGGCTTCCTCCGCTCCGAGAAGGATCGAAAGTGCGGTATCTGAAGAGTCACATGATGACCGCACAGAGAATGAACATATTATACATGACCATGAACACCGTCATCACCATCATCATCATGAGTTCATGACCATGAACACAAACATGATCATCATGCACACGAGCATACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGCAAAGGGGAGATGGATCTTGAAAAGGGAGTGCACATCATTTTCCGGGGAAGAATAATGTGGGAACCAAATGAGCCATGCATCAACAAGATTGTATTCATAGTCAATAATCTCAAATGGGGAAGAACTGGAGAAACGGCTTCAAAGATTGCCTACTCTACTGAAGGAATAAGCGAGAAACGGGACTCCAACAGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAGCAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGCCTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCCACTGCGACCCCCCTTCAGACGGGCGTGGACTAGATCATCCATCGCACCAAAGGTGGTGGACAGCCGAGCCTCCAGATCTGCGCGGTCCGTGTACATTGGGATACCTGAGAGGATCAAGGACCTGTCCGGGAAGCTGCTGCTCCAGACGGTAGCAGGGTTCGCGAGAGCACACAGCGCGATGAGCTTGTGCACGATCCGTCTGGCCTCGACCACCCTGTTCACATGGTATCCTGGTCCTGGAGACATCAACTCGTCGGATAGCCAGTTCTTGGCTTGGCAGTAGGCCACGGGACCCGCCCAGTCCCTCGTGCTGAAGCTGAGCTGCTGCGGCGGCTGCTGCGGCGGCGGCGTCAGGAACCGGGAAACGTGCAGCCATGTCATCATCAGACAGTGAGGAGAAAGCCCCCATCTCATCTCATCATCATCATCATCATCACCCCATCTCATCCCAGGAGCGTGCAGCCATGTCTCGGGAGGCTCCTGCAGCAGAAGCTCGACATCCTCCGGACTCCCGAGCACGACCACCACGACACCCATGGCCCTGTGGATCACGACGGCCTCCACCTGGTGCCTCAGCTCCACCCGGTGCTCCAGCCAGTCGGCGATCTGGGCCGCGTCACACTGCCACCGCTCTGTGCCCAGCCCTCTCAGCAGAATCACCCGGCTCCTGTACTCTTCCTGCTGCGCCGCCGCCGCCTGCGTGATCACGTACGGCGGAAGCAGGAGACGGAGCAAGGACGACGTGCCACCCTCGTCCGGGAGCAGCAGCGAGGAGGAGTCCAGCATCCGGAGGCCCGTCCTGACGAGCAACCGCGGCGCCCTCCTGGCAACCAACTCCGTGGCGTCCGCGTCGTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACGCCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGAACAAATCCACATTCACATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACAAAATGTAACTAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATAAAAAGCGCAGAATCATG ]
[+] EMBL BM421231 [ CTCCGTGGCGTCCGCGTCGTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACGCCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGCACAAATCCACATTCACATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACNAAATGTAACTAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGACTCATTTCTTGTGTAATAAAAAGCGCAGAATCATGCCCTTGAAAAAAAAAA]
consensusID : consensus_13403#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1606 fasta sequence
[AGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAGCAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGCCTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCCACTGCGACCCCCCTTCAGACGGGCGTGGACTAGATCATCCATCGCACCAAAGGTGGTGGGCAGCCGAGCCTCCAGATCTGCGCGGTCCGTGTACATTGGGATACCTGAGAGGATCAAGGACCTGTCCGGGAAGCTGCTGCTCCAGACGGTAGCAGGGTTCGCGAGAGCACACAGCGCGATGAGCTTGTGCACGATCCGTCTGGCCTCGACCACCCTGTTCACATGGTATCCTGGTCCTGGAGACATCAACTCGTCGGATAGCCAGTTCTTGGCTTGGCAGTAGGCCACGGGACCCGCCCAGTCCCTCGTGCTGAAGCTGAGCTGCTGCGGCGGCTGCTGCGGCGGCGGCGTCAGGAACCGGGAAACGTGCAGCCATGTCATCATCAGACAGTGAGGAGAAAGCCCCCATCTCATCTCATCATCATCATCATCATCACCCCATCTCATCCCAGGAGCGTGCAGCCATGTCTCGGGAGGCTCCTGCAGCAGAAGCTCGACATCCTCCGGACTCCCGAGCACGACCACCACGACACCCATGGCCCTGTGGATCACGACGGCCTCCACCTGGTGCCTCAGCTCCACCCGGTGCTCCAGCCAGTCGGCGATCTGGGCCGCGTCACACTGCCACCGCTCTGTGCCCAGCCCTCTCAGCAGAATCACCCGGCTCCTGTACTCTTCCTGCTGCGCCGCCGCCGCCTGCGTGATCACGTACGGCGGAAGCAGGAGACGGAGCAAGGACGACGTGCCACCCTCGTCCGGGAGCAGCAGCGAGGAGGAGTCCAGCATCCGGAGGCCCGTCCTGACGAGCAACCGCGGCGCCCTCCTGGCAACCAACTCCGTGGCGTCCGCGTCGTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACGCCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATAAAAAGCGCAGAATCATGCCTTGAATCCTATTAAAAAGAAAGATTCAA]
[-] EMBL AK072678 [AGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAGCAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGCCTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCCACTGCGACCCCCCTTCAGACGGGCGTGGACTAGATCATCCATCGCACCAAAGGTGGTGGGCAGCCGAGCCTCCAGATCTGCGCGGTCCGTGTACATTGGGATACCTGAGAGGATCAAGGACCTGTCCGGGAAGCTGCTGCTCCAGACGGTAGCAGGGTTCGCGAGAGCACACAGCGCGATGAGCTTGTGCACGATCCGTCTGGCCTCGACCACCCTGTTCACATGGTATCCTGGTCCTGGAGACATCAACTCGTCGGATAGCCAGTTCTTGGCTTGGCAGTAGGCCACGGGACCCGCCCAGTCCCTCGTGCTGAAGCTGAGCTGCTGCGGCGGCTGCTGCGGCGGCGGCGTCAGGAACCGGGAAACGTGCAGCCATGTCATCATCAGACAGTGAGGAGAAAGCCCCCATCTCATCTCATCATCATCATCATCATCACCCCATCTCATCCCAGGAGCGTGCAGCCATGTCTCGGGAGGCTCCTGCAGCAGAAGCTCGACATCCTCCGGACTCCCGAGCACGACCACCACGACACCCATGGCCCTGTGGATCACGACGGCCTCCACCTGGTGCCTCAGCTCCACCCGGTGCTCCAGCCAGTCGGCGATCTGGGCCGCGTCACACTGCCACCGCTCTGTGCCCAGCCCTCTCAGCAGAATCACCCGGCTCCTGTACTCTTCCTGCTGCGCCGCCGCCGCCTGCGTGATCACGTACGGCGGAAGCAGGAGACGGAGCAAGGACGACGTGCCACCCTCGTCCGGGAGCAGCAGCGAGGAGGAGTCCAGCATCCGGAGGCCCGTCCTGACGAGCAACCGCGGCGCCCTCCTGGCAACCAACTCCGTGGCGTCCGCGTCGTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACGCCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATAAAAAGCGCAGAATCATGCCTTGAATCCTATTAAAAAGAAAGATTCAA]
consensusID : consensus_13403#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1596 fasta sequence
[TCCATTCCACTCCCGATGGCGGCGGCGCTCTGCTCCGCATCCCCGGCCATCTCCGCCGCGGCGGCGGCGGCTCTCGGTGCGGCCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGCCGCTCCGGCTCCGCCACGGGCTGCGGCTGCGGTGGGGGCACAGTCCTGGAGGGCGCGGCGGCGGTTTGCCGCGTCGGCGGCTTCCACGACCACGGAGGAGGAGGAGGAGGGAGCAGGTGCTGAGGTGATGATCCCGCCCGACAACCGCATCCCCGCCACCATCATCACCGGCTTCCTCGGCTCCGGGAAGACAACCTTATTAAATCACATCTTGACTGCTCACCATGGAAAGCGTATTGCCGTCATTGAGAATGAGTATGGAGAAGTTGATATTGATGGTTCATTAGTTGCTGCACAAACTGCTGGAGCTGAGGACATAATGATGCTAAATAATGGGTGCCTTTGCTGCACTGTTCGTGGTGATTTAGTCCGTATGATTGGCGAATTGGTTGACAAGAAGAAGGGGAAGTTTGACCACATTATAATTGAAACCACTGGTTTAGCAAATCCAGCACCCATTATACAGACTTTCTATGCAGAAGATACAGTTTTTAATGATGTCAAGCTGGATGGTGTTGTGACTTTAGTAGATGCAAAGCATGCACGGCTACATCTGGATGAAGTAAAGCCCAAGGGTATAGTCAATGAAGCAGTTCAACAAATTGCATATGCTGACAGAATCATAGTTAACAAGATTGATCTTGTTAGTGAGCCTGAAGTATCTTCCTTGGGTGAGCGTATTAGGAGCATGAATCGCATGGCTCATTTGAAACGAGCCGAGTATGGGAAAGTTGATTTGGATTACGTGCTTGGAATTGGAGGCTTTGATTTGGAGAGGATCGAGAGTGCGGTAACTGAAGAGTCACATGACCACCACACAGGGCATGAACATAAACATGACCATGAACACCATCATCACGACCATCATCACCATGAC-CATGAACACAAACATGACCATCATGCACACGATCACACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGTGAAGGGGAGATGGATCTTGAAAAGGCTGACATGTGGTTGGGAAACCTACTGCTAGAACGCAGCGATGACATATACCGGATGAAGGGGCTACTTTCTGTCAGTGGAATGCCTCAGCGCTTTGTCTTTCAGGGAGTGCACGACATTTTCCAGGGATCTCCCGAGAGAATGTGGGAACCAAATGAGCCACGCATCAACAAGATTGTATTCATAGGCAAGAATCTCAATGGGGAAGAACTGGAGAAGGGCTTCAAGGATTGCCTACTGAAGAAATAAGCGAGAAACGAGTTTGTACGTTTTTCCTACACACGGGATGGGAATCTCCAGCTTCATGATTTTGAGCTTTGCGGCTGTAGAACTTATCCTT-GAATCTGAAGTGCGATTGAATGAACTAACTTGCATCATTTGCGAGATGTACAGAATGGGTAACCGTAATATCCTTGTAGCCTTGCCATCATTTACAGTTACGAATTGTACCCTNAAATTGCGCACGGTGTTTTTAAGCATACAGAG]
[+] EMBL CB621198 [TCCATTCCACTCCCGATGGCGGCGGCGCTCTGCTCCGCATCCCCGGCCATCTCCGCCGCGGCGGCGGCGGCTCTCGGTGCGGCCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGCCGCTCCGGCTCCGCCACGGGCTGCGGCTGCGGTGGGGGCACAGTCCTGGAGGGCGCGGCGGCGGTTTGCCGCGTCGGCGGCTTCCACGACCACGGAGGAGGAGGAGGAGGGAGCAGGTGCTGAGGTGATGATCCCGCCCGACAACCGCATCCCCGCCACCATCATCACCGGCTTCCTCGGCTCCGGGAAGACAACCTTATTAAATCACATCTTGACTGCTCACCATGGAAAGCGTATTGCCGTCATTGAGAATGAGTATGGAGAAGTTGATATTGATGGTTCATTAGTTGCTGCACAAACTGCTGGAGCTGAGGACATAATGATGCTAAATAATGGGTGCCTTTGCTGCACTGTTCGTGGTGATTTAGTCCGTATGATTGGCGAATTGGTTGACAAGAAGAAGGGGAAGTTTGACCACATTATAATTGAAACCACTGGTTTAGCAAATCCAGCACCCATTATACAGACTTTCTATGCAGAAGATACAGTTTTTAATGATGTCAAGCTGGATGGTGTTGTGACTTTAGTAGATGCAAAGCATGCACGGCTACATCTGGATGAAGTAAAGCCCAAGGGTATAGTCAATGAAGCAGTTCAACAAATTGCATATGCTGACAGAATCATAGTTAACAAGATTGATCTTGTTAGTGAGCCTGAAGTATCTTCCTTGGGTGAGCGTATTAGGAGCA ]
[+] EMBL CB682879 [TCCACCCTACTCCCGATGGCGGCGGCGCTCTGCTCCGCATCCCCGGCCATCTCCGCCGCGGCGGCGGCGGCTCTCGGTGCGGCCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGCCGCTCCGGCTCCGCCACGGGCTGCGGCTGCGGTGGGGGCACAGTCCTGGAGGGCGCGGCGGCGGTTTGCCGCGTCGGCGGCTTCCACGACCACGGAGGAGGAGGAGGAGGGAGCAGGTGCTGAGGTGATGATCCCGCCCGACAACCGCATCCCCGCCACCATCATCACCGGCTTCCTCGGCTCCGGGAAGACAACCTTATTAAATCACATCTTGACTGCTCACCATGGAAAGCGTATTGCCGTCATTGAGAATGAGTATGGAGAAGTTGATATTGATGGTTCATTAGTTGCTGCACAAACTGCTGGAGCTGAGGACATAATGATGCTAAATAATGGGTGCCTTTGCTGCACTGTTCGTGGTGATTTAGTCCGTATGATTGGCGAATTGGTTGACAAGAAGAAGGGGAAGTTTGACCACATTATAATTGAAACCACTGGTTTAGCAAATCCAGCACCCATTATACAGACTTTCTATGCAGAAGATACAGTTTTTAATGATGTCAAGCTGGATGGTGTTGTGACTTTAGTAGATGCAAAGCATGCACGGCT ]
[+] EMBL CB685509 [ CCGCGCGCCGCCTGCTCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGCCGCTCCGGCTCCGCCACGGGCTGCGGCTGCGGTGGGGGCACAGTCCTGGAGGGCGCGGCGGCGGCTTGCCGCGTCGGCGGCTTCCACGACCACCGAGGAGGAGGAGGAGGGAGCAGGTGCTGAGGTGATGATCCCGTCCGACAACCGTATCCACGCCACCATCATCACCGGCTTCCTCGGCTCCGGGAAGACAACCTTATTAAATCACATCTTGACTGCTCACCATGGAAAGCGTATTGCCGTCATTGACAATGAGCATGGAGAAGTTGATATTGATGGTTCATTACTTGCTGCACAAACTGCTGGAGCTGAGGATATAATGATGCTAAATAATGG ]
[+] EMBL CA305714 [ AGTAGATGCAAAGCATGCACGGCTACATCTGGATGAAGTAAAGCCCAAGGGTATAGTCAATGAAGCAGTTCAACAAATTGCATATGCTGACAGAATCATAGTTAACAAGATTGATCTTGTTAGTGAGCCTGAAGTATCTTACTTGGTTGAGCGTATTAGGAGCATGAATCGCATGGCTCATTTGAAACGAGCCGAGTATGGGAAAGNTGATTNGGATTACGTGCTTGGAATTGGAGGCTTNGATTTGGAGAGGATCGAGAGTGCGGTAACTGAAGAGTNACATGACCACCACACAGGGNATGAACATAAACATGACCATGAACACCATTATTACGACCATNATTACGATGACGCATGAACACAAACAT ]
[-] EMBL CB621199 [ AGCCGAGTATGGGAAAGTTGATTTGGATTACGTGCTTGGAATTGGAGGCTTTGATTTGGAGAGGATCGAGAGTGCGGTAACTGAAGAGTCACATGACCACCACACAGGGCATGAACATAAACATGACCATGAACACCATCATCACGACCATCATCACCATGAC CATGAACACAAACATGACCATCATGCACACGATCACACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGTGAAGGGGAGATGGATCTTGAAAAGGCTGACATGTGGTTGGGAAACCTACTGCTAGAACGCAGCGATGACATATACCGGATGAAGGGGCTACTTTCTGTCAGTGGAATGCCTCAGCGCTTTGTCTTTCAGGGAGTGCACGACATTTTCCAGGGATCTCCCGAGAGAATGTGGGAACCAAATGAGCCACGCATCAACAAGATTGTATTCATAGGCAAGAATCTCAATGGGGAAGAACTGGAGAAGGGCTTCAAGGATTGCCTACTGAAGAAATAAGCGAGAAACGAGTTTGTACGTTTTTCCTACACACGGGATGGGAATCTCCAGCTTCATGATTTTGAGCTTTGCGGCTGTAGAACTTATCCTT GAATCTGAAGTGCGATTGAATGAACTAACTTGCATCATTTGCGAGATGTACAGAATGGGTAACGGGAATATCCTTGTAGCCTTGCCATCATTTACAGTTACGAATTGTACCCTNAAATTGCGCACGGTGTTTTTAAGCATACAGAG]
[-] EMBL CB682880 [ GCCGAGTATGGGAAAGTTGATTTGGATTACGTGCTTGGAATTGGAGGCTTTGATTTGGAGAGGATCGAGAGTGCGGTAACTGAAGTCTCACATGACCACCACACAGGGCATGAACATAAACATGACCATGAACACCATCATCACGACCATCATCACCATGAC CATGAACACAAACATGACCATCATGCACACGATCACACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGTGAAGGGGAGATGGATCTTGAAAAGGCTGACATGTGGTTGGGAAACCTACTGCTAGAACGCAGCGATGACATATACCGGATGAAGGGGCTACTTTCTGTCAGTGGAATGCCTCAGCGCTTTGTCTTTCAGGGAGTGCACGACATTTTCCAGGGATCTCCCGAGAGAATGTGGGAACCAAATGAGCCACGCATCAACAAGATTGTATTCATAGGCAAGAATCTCAATGGGGAAGAACTGGAGAAGGGCTTCAAGGATTGCCTACTGAAGAAATAAGCGAGAAACGAGTTTGTACGTTTTTCCTACACACGGGATGGGAATCTCCAGCTTCATGATTTTGAGCTTTGCGGCTGTAGAACTTATCCTT GAATCTGAAGTGCGATTGAATGAACTAACTTGCATCATTTGCGAGATGTACAGAATGGGTAACCGTAATATCCTTGTAGCCTTGCCATC ]
[-] EMBL CB685510 [ ATATACCGGATGAAGGGGGTACTTTCTGTCAGTGGAATGCCTCAGCGCTTTGTCTTTCAGGGAGTGCACGACATTTTCCAGGGATCTCCCGAGAGAATCTGGGAACCAAATGAGCCACGCATCAACAAGATTGTATTCATAGGCAAGAATCTCAATGGGGAAGAACTGGAGAAGGGCTTCAAGGATTGCTTCCTGAAGAAATAAGCGAGAAATGAGTTTATACGTTTTTCCTACACACGGGATGGGAATCTCCAGATTCATGATTTTGAGCTTTGCGGCTGTAGAACTTATCCTT GAATGTGAAGTGCGATTGAATGAACTAACTTGCATCATTTACGAGATGTACAGAATGGGTAACCGTAATATCCTTGTAGCC ]
[+] EMBL BQ906861 [ ttaatTCCTTGGAATCTGAAGTGCGATTGAATGAACTAACTTGCATCATTTGCGAGATGTACAGAATGGGTAACCGTAATATCCTTGTAGCCTTGCCAT ]
consensusID : consensus_13403#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1357 fasta sequence
[CGCATCGCACCCCAGACCAGACCATGGCGGCGGCGGCGCTCTGCTCCGCCTCCCCGGCCATCTCCACGGCGGCAGCTCTCGGCGACGGCGTGGCCACGCTCCGCCTCGCGGTCCTACTGCGCCTTCGCCTCTCCACCGCGGGCTGTGGGCTGTGGCTGCGGTGGGGACCCCATCCTGGCAGGCGCGTCGGCGGCTTCCACGACTACGGAGGAAGAGGGATCAGGTGTTAGAGATGATGATCCCGACGGCTTCCTCCGCTCCGAGAAGGATCGAAAGTGCGGTATCTGAAGAGTCACATGATGACCGCACAGAGAATGAACATATTATACATGACCATGAACACCGTCATCACCATCATCATCATGAGTTCATGACCATGAACACAAACATGATCATCATGCACACGAGCATACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGCAAAGGGGAGATGGATCTTGAAAAGGGAGTGCACATCATTTTCCGGGGAAGAATAATGTGGGAACCAAATGAGCCATGCATCAACAAGATTGTATTCATAGTCAATAATCTCAAATGGGGAAGAACTGGAGAAACGGCTTCAAAGATTGCCTACTCTACTGAAGGAATAAGCGAGAAACGGGACTCCAACAGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAGCAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGCCTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGAACAAATCCACATTCACATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACAAAATGTAACTAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATAAAAAGCGCAGAATCATGCCTT]
[+] EMBL AK063989 [CGCATCGCACCCCAGACCAGACCATGGCGGCGGCGGCGCTCTGCTCCGCCTCCCCGGCCATCTCCACGGCGGCAGCTCTCGGCGACGGCGTGGCCACGCTCCGCCTCGCGGTCCTACTGCGCCTTCGCCTCTCCACCGCGGGCTGTGGGCTGTGGCTGCGGTGGGGACCCCATCCTGGCAGGCGCGTCGGCGGCTTCCACGACTACGGAGGAAGAGGGATCAGGTGTTAGAGATGATGATCCCGACGGCTTCCTCCGCTCCGAGAAGGATCGAAAGTGCGGTATCTGAAGAGTCACATGATGACCGCACAGAGAATGAACATATTATACATGACCATGAACACCGTCATCACCATCATCATCATGAGTTCATGACCATGAACACAAACATGATCATCATGCACACGAGCATACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGCAAAGGGGAGATGGATCTTGAAAAGGGAGTGCACATCATTTTCCGGGGAAGAATAATGTGGGAACCAAATGAGCCATGCATCAACAAGATTGTATTCATAGTCAATAATCTCAAATGGGGAAGAACTGGAGAAACGGCTTCAAAGATTGCCTACTCTACTGAAGGAATAAGCGAGAAACGGGACTCCAACAGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAGCAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGCCTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCAAAGACCGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACCTCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGAGGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGTCCAAGATGTATCCGCGCGGGTCGCCGCGTCCGCTCGCCTGAACAAATCCACATTCACATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACAAAATGTAACTAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATAAAAAGCGCAGAATCATGCCTT]
consensusID : consensus_13403#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[ATTCCACTCCCGATGGCGGCGGCGCTCTGCTCCGCATCCCCGGCCATCTCCGCCGCGGCGGCGGCGGCTCTCGGCGCGGGCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGCCGCTCCGGCTCCGCCACGGGCTGCGGCTGCCGAGGGGGCACAGCCCTGGAGGGCGCGGCGGAGGTTTGCCGCGTCACGCGGCTTCACGACCACGGAGGAGGAGGACGAGGCAGCACGCGCTGCAGCGACGATCCCACCCGGATACCGCATCACCGACACCATCATCACCGGATTCCACGCCTCCGGGGAAGACCACCTTATTAAACCACATCTCGGACGCCTCCCCTGGAAAGGGCATTGCCGGCATTGCAACTGAGGATGCCCAACCGGATATTGACGCGTCATCAGCCCCTGCCCAAACTGCTGGCACCGTAAGCACCAACGAAGCCGAAAAATGGGTGCCTTTGGCGCCACTGGGAGCGGACGATTCAACCCGTACGCTTGCCGAATTGCGC]
[+] EMBL CA754074 [ATTCCACTCCCGATGGCGGCGGCGCTCTGCTCCGCATCCCCGGCCATCTCCGCCGCGGCGGCGGCGGCTCTCGGCGCGGGCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGCCGCTCCGGCTCCGCCACGGGCTGCGGCTGCCGAGGGGGCACAGCCCTGGAGGGCGCGGCGGAGGTTTGCCGCGTCACGCGGCTTCACGACCACGGAGGAGGAGGACGAGGCAGCACGCGCTGCAGCGACGATCCCACCCGGATACCGCATCACCGACACCATCATCACCGGATTCCACGCCTCCGGGGAAGACCACCTTATTAAACCACATCTCGGACGCCTCCCCTGGAAAGGGCATTGCCGGCATTGCAACTGAGGATGCCCAACCGGATATTGACGCGTCATCAGCCCCTGCCCAAACTGCTGGCACCGTAAGCACCAACGAAGCCGAAAAATGGGTGCCTTTGGCGCCACTGGGAGCGGACGATTCAACCCGTACGCTTGCCGAATTGCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13403#0 GCGGCGGCGGCGCTCTGCTCCGCCTCCCCGGCCATCTCCACGGCGGCAGCTCTCGGCGAC 60
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGCGTGGCCACGCTCCGCCTCGCGGTCCTACTGCGCCTTCGCCTCTCCACCGCGGGCTGT 120
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGGCTGTGGCTGCGGTGGGGACCCCATCCTGGCAGGCGCGTCGGCGGCTTCCACGACTAC 180
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGAGGAAGAGGGATCAGGTGTTAGAGATGATGATCCCGACGGCTTCCTCCGCTCCGAGAA 240
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGATCGAAAGTGCGGTATCTGAAGAGTCACATGATGACCGCACAGAGAATGAACATATTA 300
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 TACATGACCATGAACACCGTCATCACCATCATCATCATGAGTTCATGACCATGAACACAA 360
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 ACATGATCATCATGCACACGAGCATACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGT 420
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 TTGCAAAGGGGAGATGGATCTTGAAAAGGGAGTGCACATCATTTTCCGGGGAAGAATAAT 480
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GTGGGAACCAAATGAGCCATGCATCAACAAGATTGTATTCATAGTCAATAATCTCAAATG 540
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGGAAGAACTGGAGAAACGGCTTCAAAGATTGCCTACTCTACTGAAGGAATAAGCGAGAA 600
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 ACGGGACTCCAACAGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAG 660
consensus_13403#1 -------------AGGTGGTGTATACTTCAATCCAACCAATCAACCACATGAAAGTGCAG 47
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGC 720
consensus_13403#1 CAGCCTAAAGCAACTAATATAAGGAGGAGGTGATCAGTCTAATGTTTTCATGTACACAGC 107
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCC 780
consensus_13403#1 CTGAAAGCAAGAAGAATGCATGAATGGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCC 167
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 ------------------------------------------------------------
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGT 840
consensus_13403#1 GTAGAGGCTCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGT 227
consensus_13403#3 ------------------------------CGCA-TCGCACCCCAGACCAGACCATG-GC 28
consensus_13403#2 ------------------------------------------TCCATTCCACTCCCG-AT 17
consensus_13403#4 ---------------------------------------------ATTCCACTCCCG-AT 14
* *
consensus_13403#0 GTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAA----GCTGTACCAGTCCT 896
consensus_13403#1 GTAGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAA----GCTGTACCAGTCCT 283
consensus_13403#3 GGCGGCGGCGCTCTGC-TCCGCCTCC--CCGGCCATCTCCAC----G--GCGGCAGCTCT 79
consensus_13403#2 GGCGGCGGCGCTCTGC-TCCGCATCC--CCGGCCATCTCCGCCGCGGCGGCGGCGGCTCT 74
consensus_13403#4 GGCGGCGGCGCTCTGC-TCCGCATCC--CCGGCCATCTCCGCCGCGGCGGCGGCGGCTCT 71
* ******* ** *** * * *** * * ** * * * * **
consensus_13403#0 CAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCCACTGCGA 956
consensus_13403#1 CAGCCGGCCTCCGTCCCAGCCTTGCTGCCCCATGCCAAGACTTGAACACGGCCACTGCGA 343
consensus_13403#3 CGGCGA-----CGGCGTGGCCACGCTCCGCCTCGC---GGTCCTACTGCG-CCTTCGCCT 130
consensus_13403#2 CGGTGCGGCCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGC 134
consensus_13403#4 CGGCGCGGGCGCGCGCCGCCTGCGCGTGCGCGTGCGCGCAGCCTCGCGGCCCTACTGCGC 131
* * ** * ** * ** * **
consensus_13403#0 CCCCCCTTCAG-AC---GGGCGTGGACTAGATCATCCATCGCACCAAAGGTGGTGGACAG 1012
consensus_13403#1 CCCCCCTTCAG-AC---GGGCGTGGACTAGATCATCCATCGCACCAAAGGTGGTGGGCAG 399
consensus_13403#3 CTCCACCGCGG-GCTGTGGGCTGTGGCTGCGGTGGGGACCCCATCCTGGCAGGCGCGTCG 189
consensus_13403#2 CGCTCCGGCTCCGCCACGGGCTGCGGCTGCGGTGGGGGCACAGTCCTGGAGGGCGCGGCG 194
consensus_13403#4 CGCTCCGGCTCCGCCACGGGCTGCGGCTGCCGAGGGGGCACAGCCCTGGAGGGCGCGGCG 191
* * * * * **** * ** * * ** * *
consensus_13403#0 CCGAGCCTCCAGATCT-GCGCGGTCCGTGTACATTGGGATACCTGAGAGGATCAAGGACC 1071
consensus_13403#1 CCGAGCCTCCAGATCT-GCGCGGTCCGTGTACATTGGGATACCTGAGAGGATCAAGGACC 458
consensus_13403#3 GCG-GCTTCCACGACT-ACGGAGGAAGAG-GGATCAGG-TGTTAGAGATGATGA------ 239
consensus_13403#2 GCGGTTTGCCGCGTCG-GCGGCTTCCACGACCACGGAG-----GAGGAGGAGGAGGGAGC 248
consensus_13403#4 GAGGTTTGCCGCGTCACGCGGCTTC-ACGACCACGGAG-----GAGGAGGACGAGGCAGC 245
* ** * ** * * * ** ** *
consensus_13403#0 TGTCCGGGAAGCTGCTGCTCCAGACGGTAGCAGGGTTCGCGAGAGCACACAGCGCGATGA 1131
consensus_13403#1 TGTCCGGGAAGCTGCTGCTCCAGACGGTAGCAGGGTTCGCGAGAGCACACAGCGCGATGA 518
consensus_13403#3 --TCCCGACGGCTTC--CTCCGCTCCG-AGAAGGAT---CGAAAGTGCGGTATCTGAAGA 291
consensus_13403#2 AGGTGCTGAGGTGATGATCCCGCCCGACAACCGCATCCCCGCCACCAT----CATCACCG 304
consensus_13403#4 ACGCGCTGCAGCGACGATCCCACCCGGATACCGCATCACCGACACCAT----CATCACCG 301
* ** * * * ** * *
consensus_13403#0 GCTTGTGCACGATCCGTCTGGCCTCGACCACCCTGTTCACATGGTATCCTGGTCCTGGAG 1191
consensus_13403#1 GCTTGTGCACGATCCGTCTGGCCTCGACCACCCTGTTCACATGGTATCCTGGTCCTGGAG 578
consensus_13403#3 GTCACATGATGACCGCACAGAGAATGAACATATTAT--ACATG--ACCATGAACACCGT- 346
consensus_13403#2 GCTTCCTCG-----GCTCCGGG-AAGACAACCTTATT-AAATCACATCTTGACTGC---- 353
consensus_13403#4 GATTCCACG-----CCTCCGGGGAAGACCACCTTATT-AAACCACATCTCGGACGC---- 351
* * * ** * * * * * * * *
consensus_13403#0 ACATCAAC-TCGTCGGATAGCCAGTTCTTGGCTTGGCAGTAGGCCACGGGACCCGCCCAG 1250
consensus_13403#1 ACATCAAC-TCGTCGGATAGCCAGTTCTTGGCTTGGCAGTAGGCCACGGGACCCGCCCAG 637
consensus_13403#3 -CATCACCATCATC--ATCATGAGTTCATGACCATGAACACAAACATGATCATCATGCAC 403
consensus_13403#2 -------TCACCATGGAAAGCGTATTGCCGTCATTGAGAATGAGTATGG---AGAAGTTG 403
consensus_13403#4 -------CTCCCCTGGAAAGGGCATTGCCGGCATTGCAACTGAGGATGC---CCAACCGG 401
* * ** * * * * *
consensus_13403#0 TCCCTCGTGC---TGAAGCTGA-GCTGCTGCGGCGGCTGCTGCG-GCGGCGGCGTCAGGA 1305
consensus_13403#1 TCCCTCGTGC---TGAAGCTGA-GCTGCTGCGGCGGCTGCTGCG-GCGGCGGCGTCAGGA 692
consensus_13403#3 ACGAGCATACCCATGATCCTGGTGTTTCTTCTGTAAGCATTGTTTGCAAAGGGGAGATGG 463
consensus_13403#2 ATATTGATGG-----TTCATTA-GTTGCTGCACAAACTGCTGGAGCTGAGGACAT-AATG 456
consensus_13403#4 ATATTGACGC-----GTCATCA-GCCCCTGCCCAAACTGCTGGCACCGTAAGCACCAACG 455
* * ** * ** *
consensus_13403#0 A--CCGGGAAACGTGCAGCCATGTCATCATCAGACAGTGAGGAGAAAGCCCCCAT-CTCA 1362
consensus_13403#1 A--CCGGGAAACGTGCAGCCATGTCATCATCAGACAGTGAGGAGAAAGCCCCCAT-CTCA 749
consensus_13403#3 A--TCTTGAAAAGGGAGTGCACATCATTTTC---CGGGGAAGAATAATGTGGGAA-CCAA 517
consensus_13403#2 ATGCTAAATAATGGGTGCCTTTGCTGC-ACTGTTCGTGG-TGATTTAGTCCGTATGATTG 514
consensus_13403#4 AAGCCGAAAAATGGGTGCCTTTGGCGCCACTGGGAGCGGACGATTCAACCCGTACGCTTG 515
* ** * * * ** * *
consensus_13403#0 TCTCATCATCATCATCATCATCACCCCATCTCATCCCAGGAGCGTGCAGCCATGTCTCGG 1422
consensus_13403#1 TCTCATCATCATCATCATCATCACCCCATCTCATCCCAGGAGCGTGCAGCCATGTCTCGG 809
consensus_13403#3 ATGAGCCATG--CATCAACAAGATTGTAT-TCAT------AGTCAATAATCTCAAATGGG 568
consensus_13403#2 GCGAATTGGT-TGACAAGAAGAAGGGGAAGTTTGACCACATTATAATTGAAACCACTGGT 573
consensus_13403#4 CCGAATTGCG-C------------------------------------------------ 526
consensus_13403#0 GAGGCTCCTGCAGCAGAAGCTCGACATCCTCCGGACTCCCGAGCACGACCACCACGACAC 1482
consensus_13403#1 GAGGCTCCTGCAGCAGAAGCTCGACATCCTCCGGACTCCCGAGCACGACCACCACGACAC 869
consensus_13403#3 GAAGAAC-TGGAGAAACGGCTTCAAAGATTGCCTACTCTACTGAAGGAATAA-------- 619
consensus_13403#2 TTAGCAAATCCAGCACCCATTATACAGACTTTCTATGCAGAAGATACAGTTTT----TAA 629
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CCATGGCCCTGTGGATCACGACG-GCCTCCACCTGGTGCCTCAGCTCCACCCGGTGCTCC 1541
consensus_13403#1 CCATGGCCCTGTGGATCACGACG-GCCTCCACCTGGTGCCTCAGCTCCACCCGGTGCTCC 928
consensus_13403#3 ----------GCGAGAAACG--G-GACTCCAACAGGTGG------TGTATACTTCAATCC 660
consensus_13403#2 TGATGTCAAGCTGGATGGTGTTGTGACTTTAGTAGATGCAAAGCATGCACGGCTACATCT 689
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 AGCCAGTCGGCGATCTGGGCCGCGTCACACTGCCACCGCTCTGTGCCCAGCCCTCTCAGC 1601
consensus_13403#1 AGCCAGTCGGCGATCTGGGCCGCGTCACACTGCCACCGCTCTGTGCCCAGCCCTCTCAGC 988
consensus_13403#3 AACCAATCAAC---------CACATGAAAGTGCAGCAGC-CTAAAGCAACTAATATAAGG 710
consensus_13403#2 GGATGAAGTAAAGCCCAAGGGTATAGTCAATGAAGCAGTTCAACAAATTGCATATGCTGA 749
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 AGAATCACCCGGCTCCTGTACTCTTCCTGCTGCGCCGCCGCCGCCTGCGTGATCACGTAC 1661
consensus_13403#1 AGAATCACCCGGCTCCTGTACTCTTCCTGCTGCGCCGCCGCCGCCTGCGTGATCACGTAC 1048
consensus_13403#3 AGGA------------GGTGATCAGTCTAATGTTTTCATGTACACAGCCTGA--AAGCAA 756
consensus_13403#2 CAGAATCATAGTTAACAAGATTGATCTTGTTAGTGAGCCTGAAGTATCTTCCTTGGGTGA 809
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGCGGAAGCAGGAGACGGAGCAAGGACGACGTGCCACCCTCGTCCGGGAGCAGCAGCGAG 1721
consensus_13403#1 GGCGGAAGCAGGAGACGGAGCAAGGACGACGTGCCACCCTCGTCCGGGAGCAGCAGCGAG 1108
consensus_13403#3 GAAGAATGCATGAAT-------GGGCTGGCTATCCGCTGAGGTCAAGGAGATGGTCCGTA 809
consensus_13403#2 GCGTATTAGGAGCAT-------GAATCGCATGGCTCATTTGAAACGAGCCGAGTATGGGA 862
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GAGGAGTCCAGCATCCGGA-GGCCCGTCCTGACGAGCAACCGCGGCGCCCTCCTGGCAAC 1780
consensus_13403#1 GAGGAGTCCAGCATCCGGA-GGCCCGTCCTGACGAGCAACCGCGGCGCCCTCCTGGCAAC 1167
consensus_13403#3 GAGGC-TCCGGAGCCGGGCCAACTTATCTACAATGACAGCTGCAATGAAGTCATGAGTGT 868
consensus_13403#2 AAGTTGATTTGGATTACGTGCTTGGAATTGGAGGCTTTGATTTGGAGAGGATCGAGAGTG 922
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CAACTCCGTGGCGTCCGCGTC-GTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACG 1839
consensus_13403#1 CAACTCCGTGGCGTCCGCGTC-GTCGTACACGAGCACGCCGGCGTCCCCGCCCCTCCACG 1226
consensus_13403#3 AGGCGGCGTATGGCACCCGTCTGCAGTCGGTGAACCCCAAGCTGTACCAGTCCTCAGCCG 928
consensus_13403#2 CGGTAACTGAAGAGTCACATG-ACCACCACACAGGGCATGAACATAAACATGACCATGAA 981
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGAC 1899
consensus_13403#1 CCACCACGGCGCACGCGTACTCGGCCCCGGCGAGGTGGTCTCTCGCCGCGCGGCAAAGAC 1286
consensus_13403#3 GC-CTCCGTCCCAGCCTTGCTGCCCCATGCCAAGA------CTTGA-ACACGGCAAAGAC 980
consensus_13403#2 CACCATCATCACGACCATCATCACCATGACCATGAACACAAACATGACCATCATGCACAC 1041
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACC 1959
consensus_13403#1 CGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACC 1346
consensus_13403#3 CGTAGGCTCCTCCACCACCACCATCGGACGTGCCAGCGACGCGGACGACGAAGACGCACC 1040
consensus_13403#2 GATCACACCCATGATC-CTGGTGTTTCTTCTGTAAGCATTGTTTGTGAAGGGGAGATGGA 1100
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 TCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGA 2019
consensus_13403#1 TCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGA 1406
consensus_13403#3 TCAGGTGGAGATCCGCGTCCTCGTCGTCCAGCAGGTACCGAGGCGGCACGAGCGACCGGA 1100
consensus_13403#2 TCTTGAAAAGGCTGACATGTGGTTGGGAAACCTACTGCTAGAACGCAGCGATGACATATA 1160
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 GGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGT 2079
consensus_13403#1 GGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGT 1466
consensus_13403#3 GGAGCCCAGGCTCGGGCTCAGCAGTGGTCCTCCGCCTCTCCGCCTCATCGTCCAGTGCGT 1160
consensus_13403#2 CCGGATGAAGGGGCTACTTTCTGTCAGTGGAATGCCTCAGCGCTTTGTCTTTCAGGGAGT 1220
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CCAAGATGTATCCGCGCGGGTCGCCGCG----TCCGCTCGCCTGAACAAATCCACATTCA 2135
consensus_13403#1 CCAAGATGTATCCGCGCGGGTCGCCGCG----TCCGCTCGCCTG---------------- 1506
consensus_13403#3 CCAAGATGTATCCGCGCGGGTCGCCGCG----TCCGCTCGCCTGAACAAATCCACATTCA 1216
consensus_13403#2 GCACGACATTTTCCAGGGATCTCCCGAGAGAATGTGGGAACCAAATGAGCCACGCATCAA 1280
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 CATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACAAAATGTAAC 2195
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 CATTGTCACGGAGTACTAGCTAGTAGTAGTAGTAGTAGTAATTAGTTCACAAAATGTAAC 1276
consensus_13403#2 CAAGATTGTATTCATAGGCAAGAATCTCAATGGGGAAGAACTGGAGAAGGGCTTCAAGGA 1340
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 TAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATA 2255
consensus_13403#1 -------GCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATA 1559
consensus_13403#3 TAGCCTGGCAACATCATCTCGGCTAATTGAGTTGTTTACTGATTCATTTCTTGTGTAATA 1336
consensus_13403#2 TTGCCTACTGAAGAAATAAGCGAGAAACGAGTTTGTACGTTTTTCCTACACACGGGATGG 1400
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 AAAAGCGCAGAATCATGCCCTTGA-------AAAAAAAAA-------------------- 2288
consensus_13403#1 AAAAGCGCAGAATCATGCCTTGAATCCTATTAAAAAGAAAGATTCAA------------- 1606
consensus_13403#3 AAAAGCGCAGAATCATGCCTT--------------------------------------- 1357
consensus_13403#2 GAATCTCCAGCTTCATGATTTTGAGCTTTGCGGCTGTAGAACTTATCCTTGAATCTGAAG 1460
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 ------------------------------------------------------------
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 TGCGATTGAATGAACTAACTTGCATCATTTGCGAGATGTACAGAATGGGTAACCGTAATA 1520
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 ------------------------------------------------------------
consensus_13403#1 ------------------------------------------------------------
consensus_13403#3 ------------------------------------------------------------
consensus_13403#2 TCCTTGTAGCCTTGCCATCATTTACAGTTACGAATTGTACCCTNAAATTGCGCACGGTGT 1580
consensus_13403#4 ------------------------------------------------------------
consensus_13403#0 ----------------
consensus_13403#1 ----------------
consensus_13403#3 ----------------
consensus_13403#2 TTTTAAGCATACAGAG 1596
consensus_13403#4 ----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||