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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13422#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1212 fasta sequence
[TTTTTTTTTCAAATTTTATTGTACTGTCGAGTAAATTTCTATATG-TTGATGAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC-AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA-CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA-ATACA-GGAGAGCACAGCTTGACTTGGTTCTCATATCAA-AATGG-TATATGGAA-GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA-CACCCCAT-GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT-TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA-TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATCTGCA-CATGGAACATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACTTACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCGCCGCAGATCGGCTGC]
[-] EMBL AU174904 [TTTTTTTTTCAAAAGGAATTGTACTGTCGAGTAAATTTCTATATG TTGATGAATAGTANCAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAANGCTATCTACAGAAGCACTAAATGGAANAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTNGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTNGACTNGGTTCTCATATCAA AANGG TATATGGAA GATNGGAATCCTCAAGACAATATAACCAGNCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGG ]
[+] EMBL CB653922 [ tctTTTTGTTGTACTGGCGAGTAAATTTCTATATG TTGATGCCTAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGG TATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATCTGCA CATGGAAC ]
[-] EMBL BQ905915 [ TTTTTTTGTACTTTCGAGTAAATTTCTATATGTTTGATAAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATCGAGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACAGCATGAGATCAATACAAGCCGGAGCCAACATCCAGAGCAATGCAAGATACAGGGAGAGCACAGCTTGACTTGGTTCTCATATCAAGAATGG TATATGGAACGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGAGCACCCCATGGCACAACCATTGCAAGGACNTGGGCAGATTTCAGNAAATTGTCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATAT ]
[+] EMBL CB668537 [ GTACTGTCGAGTAAATTTCTATATG TTGATGACTAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGG TATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCC ]
[+] EMBL CF308736 [ ttTACTGTCGAGTAAATTTCTATATG TTGATGAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGGNTATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGA ]
[+] EMBL CF311315 [ TTTTTTATG TTGATGAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGG TATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGA ]
[-] EMBL CB668536 [ ATCTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACTTACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCGCCGCAGATCGGCTGC]
consensusID : consensus_13422#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1169 fasta sequence
[TTGGNCCAACTCAAAAGGATTGTACTGTCGAGTAATTCTATATGTTGATGATAGTACCATTCANGGGATGAGATAGTNCTAAAATGACAGCTAATCAGCTATGA-AGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAA-ATGGAAGAATCGAATGACTAATCCCTATCCCA-TCAA-CTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCTTGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACCCCATGCACAACCATTGCAAGGACATGGCAGATTTCAGCAAATTTCTCAGCATCACTTGAAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCACAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGACTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTTGTCTCGTGGAGGAAGACGGTGATGAGCTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCCCCCCAGATCTGCTGCGCCCTCAAGGGAAATGGGGGGAGAAGAGGACGAGGAGGAGGAGGAGGAGGCAGGAAAACACGAGGAAATTGAAACCGTTCGAACTGGTT]
[-] EMBL AU163717 [TTGGNCCAACTCAAAAGGATTGTACTGTCGAGTAATTCTATATGTTGATGATAGTACCATTCANGGGATGAGATAGTNCTAAAATGACAGCTAATCAGCTATGA AGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAA ATGGAAGAATCGAATGACTAATCCCTATCCCA TCAA CTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCTTGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACG ]
[-] EMBL OS38169 [ gTGAC GCTTCTCAGCTATGAGAGTTGCCCTATAAGGAGAATGCTATCTACAAGAGCACTAATATGGAAGAATCGAATGACTAATCCCTATCCCATTCAACCTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACATGAGTTCAATACAAG TGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCTTGACTTGGTTCTCATATCAAAATGGT ]
[-] EMBL CA766621 [ GACTTGGTTCTCATATCAAAATGGTATATGAAAGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACCCCATGCACAACCATTGCAAGGACATGGCAGATTTCAGCAAATTTCTCAGCATCACTTGAAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCACAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGACTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTTGTCTCGTGGAGGAAGACGGTGATGAGCTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCCCCCC ]
[-] EMBL CF308737 [ AAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGAATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCGCCGCAGATCTGCTGCGCCCTCAAGGGAAATGGGGGGAGAAGAGGACGAGGAGGAGGAGGAGGAGGCAGGAAAACACGAGGAAATTGAAACCGTTCGAACTGGTT]
consensusID : consensus_13422#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 753 fasta sequence
[CCAAAGAAGTATCACCTAAAGGAAACATGTACAGCATAAAATCAACAAGGGGGTAAACAGGATAATAGGATTGTGTATTTATATAAAAATTTCAAAGTAATAATTTCACTTTTTGGTTGAAAGGTATTAATAAAGTTATTGAGGTGTCCACAGGAACCTAGGACAGCCTAGACAATATAGTGAGAGATCGTTCAGACATTATCATCTTGATTGGTGTTTATCCAGAACCAATCTCTTAAATATTGTGTACTAATCAATTTGGAAAATAGCAAAACCTTTTTTTTTTACAAAAGATGAACACAACCAAATGAAGTACACTGAAAGGAATACATAAGTGATATACATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCGTGGTCGT]
[-] EMBL CB653921 [CCAAAGAAGTATCACCTAAAGGAAACATGTACAGCATAAAATCAACAAGGGGGTAAACAGGATAATAGGATTGTGTATTTATATAAAAATTTCAAAGTAATAATTTCACTTTTTGGTTGAAAGGTATTAATAAAGTTATTGAGGTGTCCACAGGAACCTAGGACAGCCTAGACAATATAGTGAGAGATCGTTCAGACATTATCATCTTGATTGGTGTTTATCCAGAACCAATCTCTTAAATATTGTGTACTAATCAATTTGGAAAATAGCAAAACCTTTTTTTTTTACAAAAGATGAACACAACCAAATGAAGTACACTGAAAGGAATACATAAGTGATATACATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCGTGGTCGT]
consensusID : consensus_13422#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 590 fasta sequence
[AGCAAATTTCTCAGCATCACTAGAATGAACTTTTCGGGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGCCCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACTCCGCCCTCATTAGGATGGACCTGCATGCCCTCAACCTCTGGAGCATAGGAAAATTCTTAAGTGGCCAAACATGACTATGCTATAGAAAATTCACAATCTTTCAACAGAACTCCACAATTGAATGATGATGAAATGTGCAGTTGTGTCAAACGATAATTGTGGACAAAAGGAGGAGGGGGAAAAAAGTCTACTTCCTAATATCCATATTATAATTNAAATC]
[-] EMBL CB680509 [AGCAAATTTCTCAGCATCACTAGAATGAACTTTTCGGGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGCCCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACTCCGCCCTCATTAGGATGGACCTGCATGCCCTCAACCTCTGGAGCATAGGAAAATTCTTAAGTGGCCAAACATGACTATGCTATAGAAAATTCACAATCTTTCAACAGAACTCCACAATTGAATGATGATGAAATGTGCAGTTGTGTCAAACGATAATTGTGGACAAAAGGAGGAGGGGGAAAAAAGTCTACTTCCTAATATCCATATTATAATTNAAATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13422#1 ---TTGGNCCAACTCAAAAGGATTGTACTGTCGAGTAATTCTATATGTTGATGATAGTAC 57
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 TTTTTTTTTCAAATTTTATTGTACTGTCGAGTAAATTTCTATATGTTGATGAATAGTAAC 60
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 CATTCANGGGATGAGATAGTNCTAAAATGACAGCTAATCAGCTATGAAGATGAACTATAA 117
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 AATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATCAGCTATGAAGATGAACTATAA 120
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 GCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCAT 177
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 GCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCAT 180
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 CAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACA 237
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 CAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACA 240
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 TGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCT 297
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 TGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCT 300
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 TGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAAC 357
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 TGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAAC 360
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 CAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACC 417
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 CAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACC 420
consensus_13422#2 ------------------------------------------------------------
consensus_13422#1 CCATGCACAACCATTGCAAGGACATGG-CAGATTTCAGCAAATTTCT-CAGCATCA--CT 473
consensus_13422#3 ------------------------------------AGCAAATTTCT-CAGCATCA--CT 21
consensus_13422#0 CCATGCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATTTCT-CAGCATCA--CT 477
consensus_13422#2 -----------------CCAAAGAAGTATCACCTAAAGGAAACATGTACAGCATAAAATC 43
** *** * * ****** *
consensus_13422#1 TGAAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTAT 533
consensus_13422#3 AGAA-TGAACTTTTCGGGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTAT 80
consensus_13422#0 TGAA-TGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTAT 536
consensus_13422#2 AACAAGGGGGTAAACAGGATAATAGG--ATTGTGTAT-TTATATAAAAATTTCAAAGTAA 100
* * * * **** * * ** * ** * ** * * *** **
consensus_13422#1 TCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGT---GAATTCTT 590
consensus_13422#3 TCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGT---GAATTCTT 137
consensus_13422#0 TCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGT---GAATTCTT 593
consensus_13422#2 TAATTTCACTTTTTGGTTGAAAGGTATTAATAAAGTTATTGAGGTGTCCACAGGAACCTA 160
* ** *** * * * ** ** * * *** ** * * * * **
consensus_13422#1 GAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCACAGCCAGCGAAGAAACC 650
consensus_13422#3 GAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACC 197
consensus_13422#0 GAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACC 653
consensus_13422#2 GGACAGCCTAGACAATATAGTGAGAGATCGTTCAGACATTAT-CATCTTGATTGGTGTTT 219
* * ** * **** * * * * * * ** * * * * *
consensus_13422#1 AATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTC 710
consensus_13422#3 AATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTC 257
consensus_13422#0 AATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTC 713
consensus_13422#2 ATCCAGAACCAATCTCTTAAATATTGTGTACTA-ATCAATTTGGAAAATAGCAAAACCTT 278
* * *** ** * * ** * * *** * ** ** * *
consensus_13422#1 TAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATG-ATGAACC- 768
consensus_13422#3 TAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGCCCATTCCCCAAAATG-ATGAACC- 315
consensus_13422#0 TAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATG-ATGAACC- 771
consensus_13422#2 TTTTTTTTACAAAAGATGAACACAACCAAATGAAGTACACTGAAAGGAATACATAAGTGA 338
* * * * * * ** * * ****** ** * *** ** *
consensus_13422#1 CAGATATCCAGCAGGCAAGACTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCC 828
consensus_13422#3 CAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACTCCGCC 375
consensus_13422#0 CAGATCTGCA-CATGGAACATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCC 830
consensus_13422#2 TATACATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCC 398
* * * ** ** * ** * ********************************* *****
consensus_13422#1 CTCATTAGGATGGACCTGCATGCCCTCAACAT----CTCCGCAGGTGAGCTTGCAGGCGA 884
consensus_13422#3 CTCATTAGGATGGACCTGCATGCCCTCAACCT----CTG-------GAGCAT--AGGAAA 422
consensus_13422#0 CTCATTAGGATGGACCTGCATGCCCTCAACTTACATCTCCGCAGGTGAGCTTGCAGGCGA 890
consensus_13422#2 CTCATTAGGATGGACCTGCATGCCCTCAACAT----CTCCGCAGGTGAGCTTGCAGGCGA 454
****************************** * ** **** * *** *
consensus_13422#1 GGGCGTGGCTTGTCTCGTGGAGGAAGACGGTGATGAGCTTGAAGGGCGTGAGCAGGAACG 944
consensus_13422#3 ATTCTTAAGTGGCCAAACATGACTATGCTATAGAAAATTCACAATCTTTCAACAGAA--- 479
consensus_13422#0 GGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACG 950
consensus_13422#2 GGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACG 514
* * * * * * * * * * * * * *** *
consensus_13422#1 TCCTCCACAGGAGGAGGATGACGACG-GTGGAGACGCCGACGGCGGCTATGAAGATCTTC 1003
consensus_13422#3 --CTCCACAATTGAATGATGATGAAATGTGCAGTTGTGTCAAACGATAATTGTGGACAAA 537
consensus_13422#0 TCCTCCACAGCTGCAATCCAAAGGCA-GAGCAAAAACCCAAACCCCCCACACACAACGAA 1009
consensus_13422#2 TCCTCCACAGCTGCAATCCAAAGGCA---GCAAAAACCCAAACCCCCCACACACAACGAA 571
******* * * * * * * * * *
consensus_13422#1 TGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCT 1063
consensus_13422#3 AGGAGGAGGGGGAAAAAAGTCTACTTCCTAATATCCATATT-ATAATTNAAATC------ 590
consensus_13422#0 C--CCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAG 1067
consensus_13422#2 C--CCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAG 629
* * * * * * *
consensus_13422#1 CCCCCCAGA-TCTGCTGCGCCCTCAAGGGAAATGGGGGGAGAAGAGGACGAGGAGGAGGA 1122
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 CTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGA 1127
consensus_13422#2 CTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGA 689
consensus_13422#1 GGAGGAGGCAGGAAAACACGAGGAAATTGAAACCGTTCGAACTGGTT------------- 1169
consensus_13422#3 ------------------------------------------------------------
consensus_13422#0 AGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCG 1187
consensus_13422#2 AGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCGTGG 749
consensus_13422#1 -------------------------
consensus_13422#3 -------------------------
consensus_13422#0 TCGTTCCTCGCCGCAGATCGGCTGC 1212
consensus_13422#2 TCGT--------------------- 753
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||