These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13422#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1212 fasta sequence [TTTTTTTTTCAAATTTTATTGTACTGTCGAGTAAATTTCTATATG-TTGATGAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC-AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA-CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA-ATACA-GGAGAGCACAGCTTGACTTGGTTCTCATATCAA-AATGG-TATATGGAA-GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA-CACCCCAT-GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT-TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA-TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATCTGCA-CATGGAACATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACTTACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCGCCGCAGATCGGCTGC] [-] EMBL AU174904 [TTTTTTTTTCAAAAGGAATTGTACTGTCGAGTAAATTTCTATATG TTGATGAATAGTANCAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAANGCTATCTACAGAAGCACTAAATGGAANAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTNGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTNGACTNGGTTCTCATATCAA AANGG TATATGGAA GATNGGAATCCTCAAGACAATATAACCAGNCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGG ] [+] EMBL CB653922 [ tctTTTTGTTGTACTGGCGAGTAAATTTCTATATG TTGATGCCTAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGG TATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATCTGCA CATGGAAC ] [-] EMBL BQ905915 [ TTTTTTTGTACTTTCGAGTAAATTTCTATATGTTTGATAAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATCGAGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACAGCATGAGATCAATACAAGCCGGAGCCAACATCCAGAGCAATGCAAGATACAGGGAGAGCACAGCTTGACTTGGTTCTCATATCAAGAATGG TATATGGAACGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGAGCACCCCATGGCACAACCATTGCAAGGACNTGGGCAGATTTCAGNAAATTGTCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATAT ] [+] EMBL CB668537 [ GTACTGTCGAGTAAATTTCTATATG TTGATGACTAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGG TATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCC ] [+] EMBL CF308736 [ ttTACTGTCGAGTAAATTTCTATATG TTGATGAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGGNTATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGA ] [+] EMBL CF311315 [ TTTTTTATG TTGATGAATAGTAACAATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATC AGCTATGAAGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCATCAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACA CATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAA ATACA GGAGAGCACAGCTTGACTTGGTTCTCATATCAA AATGG TATATGGAA GATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGA CACCCCAT GCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGA ] [-] EMBL CB668536 [ ATCTCAGCAAATT TCTCAGCATCACTTGAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAA TTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACTTACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCGCCGCAGATCGGCTGC] consensusID : consensus_13422#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1169 fasta sequence [TTGGNCCAACTCAAAAGGATTGTACTGTCGAGTAATTCTATATGTTGATGATAGTACCATTCANGGGATGAGATAGTNCTAAAATGACAGCTAATCAGCTATGA-AGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAA-ATGGAAGAATCGAATGACTAATCCCTATCCCA-TCAA-CTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCTTGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACCCCATGCACAACCATTGCAAGGACATGGCAGATTTCAGCAAATTTCTCAGCATCACTTGAAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCACAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGACTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTTGTCTCGTGGAGGAAGACGGTGATGAGCTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCCCCCCAGATCTGCTGCGCCCTCAAGGGAAATGGGGGGAGAAGAGGACGAGGAGGAGGAGGAGGAGGCAGGAAAACACGAGGAAATTGAAACCGTTCGAACTGGTT] [-] EMBL AU163717 [TTGGNCCAACTCAAAAGGATTGTACTGTCGAGTAATTCTATATGTTGATGATAGTACCATTCANGGGATGAGATAGTNCTAAAATGACAGCTAATCAGCTATGA AGATGAACTATAAGCAGAATGCTATCTACAGAAGCACTAA ATGGAAGAATCGAATGACTAATCCCTATCCCA TCAA CTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACATGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCTTGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACG ] [-] EMBL OS38169 [ gTGAC GCTTCTCAGCTATGAGAGTTGCCCTATAAGGAGAATGCTATCTACAAGAGCACTAATATGGAAGAATCGAATGACTAATCCCTATCCCATTCAACCTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACATGAGTTCAATACAAG TGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCTTGACTTGGTTCTCATATCAAAATGGT ] [-] EMBL CA766621 [ GACTTGGTTCTCATATCAAAATGGTATATGAAAGATTGGAATCCTCAAGACAATATAACCAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACCCCATGCACAACCATTGCAAGGACATGGCAGATTTCAGCAAATTTCTCAGCATCACTTGAAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCACAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGACTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTTGTCTCGTGGAGGAAGACGGTGATGAGCTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCCCCCC ] [-] EMBL CF308737 [ AAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGAATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCTCGCCGCAGATCTGCTGCGCCCTCAAGGGAAATGGGGGGAGAAGAGGACGAGGAGGAGGAGGAGGAGGCAGGAAAACACGAGGAAATTGAAACCGTTCGAACTGGTT] consensusID : consensus_13422#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 753 fasta sequence [CCAAAGAAGTATCACCTAAAGGAAACATGTACAGCATAAAATCAACAAGGGGGTAAACAGGATAATAGGATTGTGTATTTATATAAAAATTTCAAAGTAATAATTTCACTTTTTGGTTGAAAGGTATTAATAAAGTTATTGAGGTGTCCACAGGAACCTAGGACAGCCTAGACAATATAGTGAGAGATCGTTCAGACATTATCATCTTGATTGGTGTTTATCCAGAACCAATCTCTTAAATATTGTGTACTAATCAATTTGGAAAATAGCAAAACCTTTTTTTTTTACAAAAGATGAACACAACCAAATGAAGTACACTGAAAGGAATACATAAGTGATATACATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCGTGGTCGT] [-] EMBL CB653921 [CCAAAGAAGTATCACCTAAAGGAAACATGTACAGCATAAAATCAACAAGGGGGTAAACAGGATAATAGGATTGTGTATTTATATAAAAATTTCAAAGTAATAATTTCACTTTTTGGTTGAAAGGTATTAATAAAGTTATTGAGGTGTCCACAGGAACCTAGGACAGCCTAGACAATATAGTGAGAGATCGTTCAGACATTATCATCTTGATTGGTGTTTATCCAGAACCAATCTCTTAAATATTGTGTACTAATCAATTTGGAAAATAGCAAAACCTTTTTTTTTTACAAAAGATGAACACAACCAAATGAAGTACACTGAAAGGAATACATAAGTGATATACATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCCCTCATTAGGATGGACCTGCATGCCCTCAACATCTCCGCAGGTGAGCTTGCAGGCGAGGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACGTCCTCCACAGCTGCAATCCAAAGGCAGCAAAAACCCAAACCCCCCACACACAACGAACCCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAGCTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGAAGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCGTGGTCGT] consensusID : consensus_13422#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 590 fasta sequence [AGCAAATTTCTCAGCATCACTAGAATGAACTTTTCGGGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGCCCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACTCCGCCCTCATTAGGATGGACCTGCATGCCCTCAACCTCTGGAGCATAGGAAAATTCTTAAGTGGCCAAACATGACTATGCTATAGAAAATTCACAATCTTTCAACAGAACTCCACAATTGAATGATGATGAAATGTGCAGTTGTGTCAAACGATAATTGTGGACAAAAGGAGGAGGGGGAAAAAAGTCTACTTCCTAATATCCATATTATAATTNAAATC] [-] EMBL CB680509 [AGCAAATTTCTCAGCATCACTAGAATGAACTTTTCGGGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTATTCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGTGAATTCTTGAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACCAATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTCTAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGCCCATTCCCCAAAATGATGAACCCAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACTCCGCCCTCATTAGGATGGACCTGCATGCCCTCAACCTCTGGAGCATAGGAAAATTCTTAAGTGGCCAAACATGACTATGCTATAGAAAATTCACAATCTTTCAACAGAACTCCACAATTGAATGATGATGAAATGTGCAGTTGTGTCAAACGATAATTGTGGACAAAAGGAGGAGGGGGAAAAAAGTCTACTTCCTAATATCCATATTATAATTNAAATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13422#1 ---TTGGNCCAACTCAAAAGGATTGTACTGTCGAGTAATTCTATATGTTGATGATAGTAC 57 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 TTTTTTTTTCAAATTTTATTGTACTGTCGAGTAAATTTCTATATGTTGATGAATAGTAAC 60 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 CATTCANGGGATGAGATAGTNCTAAAATGACAGCTAATCAGCTATGAAGATGAACTATAA 117 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 AATTCAAGAGATGAGATAGTACTAAAATGACAGCTAATCAGCTATGAAGATGAACTATAA 120 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 GCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCAT 177 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 GCAGAATGCTATCTACAGAAGCACTAAATGGAAGAATCGAATGACTAATCCCTATCCCAT 180 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 CAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACA 237 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 CAACTCCAATTGGCATAAATCGATTGCCGTTTGTATGAACTTTCTACAACTCATGACACA 240 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 TGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCT 297 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 TGAGATCAATACAAGCTGGAGCCAACATCCAGAGCAATGCAAATACAGGAGAGCACAGCT 300 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 TGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAAC 357 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 TGACTTGGTTCTCATATCAAAATGGTATATGGAAGATTGGAATCCTCAAGACAATATAAC 360 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 CAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACC 417 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 CAGTCCAAGGTATATTGATGCGCAAAGAAAGATAAACGAGATGAAGCCCCATATGACACC 420 consensus_13422#2 ------------------------------------------------------------ consensus_13422#1 CCATGCACAACCATTGCAAGGACATGG-CAGATTTCAGCAAATTTCT-CAGCATCA--CT 473 consensus_13422#3 ------------------------------------AGCAAATTTCT-CAGCATCA--CT 21 consensus_13422#0 CCATGCACAACCATTGCAAGGACATGGGCAGATTTCAGCAAATTTCT-CAGCATCA--CT 477 consensus_13422#2 -----------------CCAAAGAAGTATCACCTAAAGGAAACATGTACAGCATAAAATC 43 ** *** * * ****** * consensus_13422#1 TGAAATGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTAT 533 consensus_13422#3 AGAA-TGAACTTTTCGGGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTAT 80 consensus_13422#0 TGAA-TGAACTCTTCGTGATATCAAGTCATCATAGATATCGTAGACTGAAAACAAGCTAT 536 consensus_13422#2 AACAAGGGGGTAAACAGGATAATAGG--ATTGTGTAT-TTATATAAAAATTTCAAAGTAA 100 * * * * **** * * ** * ** * ** * * *** ** consensus_13422#1 TCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGT---GAATTCTT 590 consensus_13422#3 TCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGT---GAATTCTT 137 consensus_13422#0 TCATCACACCTATGAATAAAATTACATACTTGAGACTATGGAATTTTGT---GAATTCTT 593 consensus_13422#2 TAATTTCACTTTTTGGTTGAAAGGTATTAATAAAGTTATTGAGGTGTCCACAGGAACCTA 160 * ** *** * * * ** ** * * *** ** * * * * ** consensus_13422#1 GAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCACAGCCAGCGAAGAAACC 650 consensus_13422#3 GAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACC 197 consensus_13422#0 GAATGACCCAAACAACAGCAAGGAATACGATGAAACCAATGCAGAGCCAGCGAAGAAACC 653 consensus_13422#2 GGACAGCCTAGACAATATAGTGAGAGATCGTTCAGACATTAT-CATCTTGATTGGTGTTT 219 * * ** * **** * * * * * * ** * * * * * consensus_13422#1 AATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTC 710 consensus_13422#3 AATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTC 257 consensus_13422#0 AATTTTTAGCAACAAAAAGAACAACGATTAATGCAAGAATGAAGCAACCCGCTGCAATTC 713 consensus_13422#2 ATCCAGAACCAATCTCTTAAATATTGTGTACTA-ATCAATTTGGAAAATAGCAAAACCTT 278 * * *** ** * * ** * * *** * ** ** * * consensus_13422#1 TAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATG-ATGAACC- 768 consensus_13422#3 TAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGCCCATTCCCCAAAATG-ATGAACC- 315 consensus_13422#0 TAGTAGTGAGGAGATTTGTGGAAGCCAGTATGAAGACCATTCCCCAAAATG-ATGAACC- 771 consensus_13422#2 TTTTTTTTACAAAAGATGAACACAACCAAATGAAGTACACTGAAAGGAATACATAAGTGA 338 * * * * * * ** * * ****** ** * *** ** * consensus_13422#1 CAGATATCCAGCAGGCAAGACTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCC 828 consensus_13422#3 CAGATATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACTCCGCC 375 consensus_13422#0 CAGATCTGCA-CATGGAACATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCC 830 consensus_13422#2 TATACATCCAGCAGGCAAGATTATCCAATATATGCCGCCCCGAGTTTGAGTAACACCGCC 398 * * * ** ** * ** * ********************************* ***** consensus_13422#1 CTCATTAGGATGGACCTGCATGCCCTCAACAT----CTCCGCAGGTGAGCTTGCAGGCGA 884 consensus_13422#3 CTCATTAGGATGGACCTGCATGCCCTCAACCT----CTG-------GAGCAT--AGGAAA 422 consensus_13422#0 CTCATTAGGATGGACCTGCATGCCCTCAACTTACATCTCCGCAGGTGAGCTTGCAGGCGA 890 consensus_13422#2 CTCATTAGGATGGACCTGCATGCCCTCAACAT----CTCCGCAGGTGAGCTTGCAGGCGA 454 ****************************** * ** **** * *** * consensus_13422#1 GGGCGTGGCTTGTCTCGTGGAGGAAGACGGTGATGAGCTTGAAGGGCGTGAGCAGGAACG 944 consensus_13422#3 ATTCTTAAGTGGCCAAACATGACTATGCTATAGAAAATTCACAATCTTTCAACAGAA--- 479 consensus_13422#0 GGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACG 950 consensus_13422#2 GGGCGTGGCTGGTCTCGTGGAGGAAGACGGTGATGAGTTTGAAGGGCGTGAGCAGGAACG 514 * * * * * * * * * * * * * *** * consensus_13422#1 TCCTCCACAGGAGGAGGATGACGACG-GTGGAGACGCCGACGGCGGCTATGAAGATCTTC 1003 consensus_13422#3 --CTCCACAATTGAATGATGATGAAATGTGCAGTTGTGTCAAACGATAATTGTGGACAAA 537 consensus_13422#0 TCCTCCACAGCTGCAATCCAAAGGCA-GAGCAAAAACCCAAACCCCCCACACACAACGAA 1009 consensus_13422#2 TCCTCCACAGCTGCAATCCAAAGGCA---GCAAAAACCCAAACCCCCCACACACAACGAA 571 ******* * * * * * * * * * consensus_13422#1 TGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCGTCGTTCCT 1063 consensus_13422#3 AGGAGGAGGGGGAAAAAAGTCTACTTCCTAATATCCATATT-ATAATTNAAATC------ 590 consensus_13422#0 C--CCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAG 1067 consensus_13422#2 C--CCGATTCAGAAGCAACACAACACAACCAAACCAAGCAAAGCAGGGAGAAGGACGGAG 629 * * * * * * * consensus_13422#1 CCCCCCAGA-TCTGCTGCGCCCTCAAGGGAAATGGGGGGAGAAGAGGACGAGGAGGAGGA 1122 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 CTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGA 1127 consensus_13422#2 CTAGGGAGGGTGTGCTCACGAGGAGGATGACGACGGTGGAGACGCCGACGGCGGCTATGA 689 consensus_13422#1 GGAGGAGGCAGGAAAACACGAGGAAATTGAAACCGTTCGAACTGGTT------------- 1169 consensus_13422#3 ------------------------------------------------------------ consensus_13422#0 AGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCCTCG 1187 consensus_13422#2 AGATCTTCTGGTCGCGGTCGCAGCATCCCTGCAGCTCCCAGTTCACCTTCACCATCGTGG 749 consensus_13422#1 ------------------------- consensus_13422#3 ------------------------- consensus_13422#0 TCGTTCCTCGCCGCAGATCGGCTGC 1212 consensus_13422#2 TCGT--------------------- 753 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||