These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13430#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1748 fasta sequence [ACTCCACACCACCACACACTCCCCTTCCCTTCCTTCTCCGGTCTCCTCCCTCTCTCGTCGTCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGGATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAA-GCTGCCGTAGATG-CTAGGAAA-GAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACC-TGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTG-ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG-AAACCTATCATCAGGGGCTTTAGAATGTTCATTTCTGCAGACCTACGGCAACAAATGCCAGGGATCATGACAGCAATTTTCATCAGAATCAGTCATGTACAAAGATAAATGGCAATGCCATATTGTCATGTACTCTCAACATGAACCAACTGATCATCACTGACTGCAACCATGCATGTATCAAGAAACCCAGCATAGAACAAATTTTGGGCATGTGTGCCATTCTGTATAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK067193 [ACTCCACACCACCACACACTCCCCTTCCCTTCCTTCTCCGGTCTCCTCCCTCTCTCGTCGTCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGGATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAA GCTGCCGTAGATG CTAGGAAA GAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACC TGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG AAACCTATCATCAGGGGCTTTAGAATGTTCTTTTCTGCAGACCTACGGCAACAAATGCCAGGGATCATGAC ] [+] EMBL CA755074 [ ACCACACACTCCCCTTCCCTTCCTTCTCCGGTCTCCTCCCTCTCTCGTCGTCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGGATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCAGATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGCCATCACGGCTATGGAAATGCTATGAGCATTAAGAGAACCGCAAGAGGGTATATCTATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCACAAGCATGTGGAACTACCGAAGGATGGAAAGCCATCTCGTGGGAGGATGCTATCACGCACATAAAAGGCTGCCGTAGATGCCTGGGAAAGGGGAGTGcct ] [+] EMBL AK104891 [ CTCCTCCCTCTCTCGTCGTCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGGATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAA GCTGCCGTAGATG CTAGGAAA GAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACC TGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG AAACCTATCATCA ] [+] EMBL CB675496 [ CCTCCCTCTCTCGTCGTCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGGATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAA GCTGCCGTAGATG CTAGGAAA GAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGANAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCC ] [+] EMBL CB682810 [ TCCCTCTCTCGTCGTCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGGATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCGCCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGCTTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAA GCTGCCGTAGATG CTAGGAAA GAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAA ] [+] EMBL CF303696 [ TTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGCGGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGAGAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGATGGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAATGCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACTGAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAA GCTGCCGTAGATG CTAGGAAA GAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCTATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTTCTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGG ] [-] EMBL CB675497 [ GCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACC TGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAACTGCTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG AAACCTATCATCAGGGGCTT ] [-] EMBL CB682811 [ GATGAAAGCATTTTGTGCGGTTTCACCTAAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCTGCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACC TGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAGGG AAACCTATCATCAGGGGCTTTAGAATGTTCA ] [+] EMBL BQ909112 [ gGATTGGGGTATCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACCTTGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAAGAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCAC AATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATT CAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTGTATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTA CCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTT CCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAANCGCNNACCTATCATCAGGGGCTTTAAAAaaa ] [+] EMBL AU097473 [ GTNCACCCCGACC TGGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTANCCGATATTACAAAGANGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTTCGATTAAAGATCNCAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG AAACCTATCATCAGGGGCTTTAGAAaaaaaaaaa ] [-] EMBL CA760568 [ AGCCATTATCCACAAATATTGTACTTCGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGAATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATACTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTTTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG AAACCTATCATCAGGGGCTTTAGAATGTTCTTTTTTGCAGACCTACGGCAACAAATGCCA GGATCATGACAGCAATTTTCATCAGAATCAGTCATGTACAAAGATAAATGGCAATGCCATATTGTCATGTACTCTCAACATGAACCAACTGATCATCACTGACTGCAACCATGCATGTATCAAGAAACCCAGCATAGAACAAATTTTGGGCATGTGTGCCATTCTGTATAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA754752 [ CTGCTTG ATCGTGAGGATGCAACTGGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCTCTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAG AAACCTATCATCAGGGGCTTTAAAAaaaaaaaaa ] consensusID : consensus_13430#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 590 fasta sequence [NGTTGCCTTTNNTACCATTTCCGNGGGANAAGNTCAANGGGGTTGTGGANAAANNATGGCACCGACTGNNTTNCNTTTTNNGGATNAAGAAATTTGGGGTTANCGTATACAGGGGAAAGCAATAGCAAANTCCAGCAAGCCCANCATTTCCACAATATNGTAATTGGATTAAAGATCACAGAAAAAGTGGAACCAGAAGATAAATGAAGGGATACNTGCTGGATCCTAGAGAGATNTCAAAANTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATANTTCAGGGTGCAGATCAGTCCCAGAAAGGNAAATTGCTGCTTGATTGNGNGGATGCAACTGGCGACAGGATNCAGGTGTCCATNGNGTGATCAATGCCTACANACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATNGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGNGTAGTACCNTGAAGTGTTAATTTTGCGAGTTGGGTTTTCCTTTTTGCGTTGCCTTGTGGTGTTAATAATTCTGGATTCCTGTGTTGATTCAAATAAAAGNAACCTNTNNTC] [-] EMBL BE229234 [NGTTGCCTTTNNTACCATTTCCGNGGGANAAGNTCAANGGGGTTGTGGANAAANNATGGCACCGACTGNNTTNCNTTTTNNGGATNAAGAAATTTGGGGTTANCGTATACAGGGGAAAGCAATAGCAAANTCCAGCAAGCCCANCATTTCCACAATATNGTAATTGGATTAAAGATCACAGAAAAAGTGGAACCAGAAGATAAATGAAGGGATACNTGCTGGATCCTAGAGAGATNTCAAAANTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATANTTCAGGGTGCAGATCAGTCCCAGAAAGGNAAATTGCTGCTTGATTGNGNGGATGCAACTGGCGACAGGATNCAGGTGTCCATNGNGTGATCAATGCCTACANACATTGCCTAGAAGCATGGATGGCCAGTAATGTAGGGCAAATNGCCTTCAATATTGAAGCAAACGATTTTCCAAGTTGTAATGGTAGCCGTTTAGNGTAGTACCNTGAAGTGTTAATTTTGCGAGTTGGGTTTTCCTTTTTGCGTTGCCTTGTGGTGTTAATAATTCTGGATTCCTGTGTTGATTCAAATAAAAGNAACCTNTNNTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13430#0 ACTCCACACCACCACACACTCCCCTTCCCTTCCTTCTCCGGTCTCCTCCCTCTCTCGTCG 60 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 TCGTCGTCGTCGCCGTCGCCGGCTCGCCGCGTTCTCCTCCGCCGCCGCTGCTGAGCCGGG 120 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 ATGGCCGCGCGTAGCCCCTACTTCGTCCCCGAGAGCGAGGGGATCCGGGCCGGGGAGTCG 180 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 CCGGCCGCGGCGCTCCGCAGGATCCTCGCGTCGCCGGGGGCGCACCAGGCCCCCTGCTGC 240 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 TTCGACGCGCTCGGCGCCCGCCTCATCCAGCGCGCGGGGTTCCCGATCTGCTTCATGGGC 300 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GGTTTCTGTGTTTCTGCCGCACGACTTGGATTGCCAGATGCTGGTCTCATCTCATATGGA 360 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GAAATGGTAGATCAAGGGCGTCTGATCACTGAAGCTGTATCACTCCCAGTTATCGGCGAT 420 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GGTGATAATGGCTATGGAAATGCTATGAGCATTAAGAGAACCGTAAAAGGGTATATTAAT 480 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GCTGGTTTTGCTGGAATCATGCTCGAAGATCAGGTGGCACCAAAAGCATGTGGACATACT 540 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GAAGGAAGGAAAGTTATCTCAAGGGAGGATGCTATCATGCACATAAAAGCTGCCGTAGAT 600 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GCTAGGAAAGAGAGTGGTTCTGACATTGTTATCATTGCAAGGTCAGACTCTCGTCAAGCT 660 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 ATCTCTATTGATGAAGCGCTATGGAGGGTACAGGCTTTTGCCGATGCTGGAGCAGATGTT 720 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 CTATTCATTGATGCTCTTGCTTCAATAGAAGAGATGAAAGCATTTTGTGCGGTTTCACCT 780 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 AAAGTTCCAAAGATGGCAAACATGCTAGAAGGTGGTGGTAAAACTCCCATATTGAGCCCT 840 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 GCTGAACTTCAGGAGATTGGTTTTAGCCTCGTAGTCTACCCATTGTCCCTGATTGGGGTA 900 consensus_13430#1 ----------------------------------------------NGTTGCCTTTNNTA 14 ** * ** consensus_13430#0 TCAATGCTCGCAATGGAGGATGCTCTGATTGCGATAAAAAGTACTGGTGCACCCCGACCT 960 consensus_13430#1 CCATTTCCGNGGGANAAGNTCAANGGGGTTGTGG--ANAAANNATGGCAC----CGAC-- 66 ** * * ** * *** * * ** *** * **** consensus_13430#0 GGTAGCTTGCCATCTTTTCAGGAGATCAAGGATACTCTAGGGTTTAACCGATATTACAAA 1020 consensus_13430#1 -------TGNNTTNCNTTTTNNGGATNAAGAA--ATTTGGGGTT--ANCG----TATACA 111 ** * ** *** *** * * * ***** * ** ** * * consensus_13430#0 GAAGAAAAGCAATATGCAACAGTCCAGCAAGCCCAGCCATTATCCACAAATATTGTACTT 1080 consensus_13430#1 GG-GGAAAGCAATA-GCAA-ANTCCAGCAAGCCCANC-ATT-TCCACAA-TATNGTAATT 165 * * ********* **** * ************* * *** ******* *** *** ** consensus_13430#0 CGATTAAAGATCACAGAAAAAAGTGGAACGCAGAAGATAAATGAAGGGATACCTGCTGGA 1140 consensus_13430#1 GGATTAAAGATCACAGAAAAA-GTGGAAC-CAGAAGATAAATGAAGGGATACNTGCTGGA 223 ******************** ******* ********************** ******* consensus_13430#0 ATCCTAGAGAAGATATCAAAAGCTATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATA 1200 consensus_13430#1 -TCCTAGAGA-GATNTCAAAAN-TATTCCAGGCTTGGCTGGTGTCAATTTGACGGAAATA 280 ********* *** ****** ************************************* consensus_13430#0 CTTCAGGGTGCAGATCAGTCCCAGAAAGGAAAATTGCTGCTTGATCGTGAGGATGCAACT 1260 consensus_13430#1 NTTCAGGGTGCAGATCAGTCCCAGAAAGGNAAATTGCTGCTTGATTGNGNGGATGCAACT 340 **************************** *************** * * ********** consensus_13430#0 GGCGACAGGATCCAGGTGTCCATCGAGTGATCAATGCCTACATACATTGCCTAGAAGCAT 1320 consensus_13430#1 GGCGACAGGATNCAGGTGTCCATNGNGTGATCAATGCCTACANACATTGCCTAGAAGCAT 400 *********** *********** * **************** ***************** consensus_13430#0 GGATGGCCAGTAATGTAGGGCAAATCGCCTTCAATATTGAAGCAAACGATTTTCCAAGTT 1380 consensus_13430#1 GGATGGCCAGTAATGTAGGGCAAATNGCCTTCAATATTGAAGCAAACGATTTTCCAAGTT 460 ************************* ********************************** consensus_13430#0 GTAATGGTAGCCGTTTAGCGTAGTACCTTGAAGTGTTACTTCTGCGAGTTGGGTTTTCCT 1440 consensus_13430#1 GTAATGGTAGCCGTTTAGNGTAGTACCNTGAAGTGTTAATTTTGCGAGTTGGGTTTTCCT 520 ****************** ******** ********** ** ****************** consensus_13430#0 CTTTGCGTTGCCTTGTGGTGTTAATAATCCTGGATTCCTGTGTTGATTCAAATAAAAGAA 1500 consensus_13430#1 TTTTGCGTTGCCTTGTGGTGTTAATAATTCTGGATTCCTGTGTTGATTCAAATAAAAGNA 580 *************************** ***************************** * consensus_13430#0 ACCTATCATCAGGGGCTTTAGAATGTTCATTTCTGCAGACCTACGGCAACAAATGCCAGG 1560 consensus_13430#1 ACCTNTNNTC-------------------------------------------------- 590 **** * ** consensus_13430#0 GATCATGACAGCAATTTTCATCAGAATCAGTCATGTACAAAGATAAATGGCAATGCCATA 1620 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 TTGTCATGTACTCTCAACATGAACCAACTGATCATCACTGACTGCAACCATGCATGTATC 1680 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 AAGAAACCCAGCATAGAACAAATTTTGGGCATGTGTGCCATTCTGTATAAAAAAAAAAAA 1740 consensus_13430#1 ------------------------------------------------------------ consensus_13430#0 AAAAAAAA 1748 consensus_13430#1 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||