cluster # 1345

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Oryza sativa
cluster # 1345 cluster # 1345 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1345#0 length = 627 sequences # 2

consensusID : consensus_1345#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 627
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGCCGGAGCTTCCATATATTTCATTTACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAGATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGGGGGAGACACCATCGAACCAGAGATGAACAATTAAACAAGGCTTTTTTTGACGATGACGGGTTAATTGCCACCAAACTCCTCGCAGCCCGGGGGCTTGTAGGCGATGAAACTGATGAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACCCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCAGTGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGACAGGGCACCCACTTGMAACGAAGAAGTACTCGATCTSCTTCAGAAGTCCTCCACGGTGAGKGGTGMCAGGTAGGAGAGGGTCTCGAACTMCCTCG]

[+] EMBL CF335259             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGCCGGAGCTTCCATATATTTCATTTACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAGATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGGGGGAGACACCATCGAACCAGAGATGAACAATTAAACAAGGCTTTTTTTGACGATGACGGGTTAATTGCCACCAAACTCCTCGCAGCCCGGGGGCTTGTAGGCGATGAAACTGATGAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACCCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCAGTGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTAC                                                                                                                                                                    ]
[-] EMBL BE229352             [                                                                                                                                                                                                                                                                                                              TGTAGGCGATGAAGCTGATGAGCTGCACCTGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGMTGCCGTCAGTGCACCCGAACATGGGCAGCTRCCACATGGTCCAGTACCTGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGACAGGGCACCCACTTGMAACGAAGAAGTACTCGATCTSCTTCAGAAGTCCTCCACGGTGAGKGGTGMCAGGTAGGAGAGGGTCTCGAACTMCCTCG]




>consensus_1345#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGCCGGAGCTTCCATATATTTCATTTA
CATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAG
AGAGATCAGGGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAGATCAAAAGACGATGA
ACAAACTGGGAACACACGAAACAAGGGGGGAGACACCATCGAACCAGAGATGAACAATTA
AACAAGGCTTTTTTTGACGATGACGGGTTAATTGCCACCAAACTCCTCGCAGCCCGGGGG
CTTGTAGGCGATGAAACTGATGAACTGCACCTGCCTGACGTTGTCGAAGCCGATGATACG
GACGAATGCATCAGGGTACCCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGC
GTCAGTGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCC
GGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGACAGGGCAC
CCACTTGMAACGAAGAAGTACTCGATCTSCTTCAGAAGTCCTCCACGGTGAGKGGTGMCA
GGTAGGAGAGGGTCTCGAACTMCCTCG

clustalw multiple alignements is not computed in this case