cluster # 13451

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Oryza sativa
cluster # 13451 cluster # 13451 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13451#0 length = 1835 sequences # 9

consensus_13451#1 length = 713 sequences # 3
consensus_13451#2 length = 206 sequences # 1

consensusID : consensus_13451#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1835
fasta sequence

                              [GGTTAGACTTTTTTTTCCCTTTGCCTATAATAAAGCCATCTCTCATAAAGCCATCGACCTCATCTCCTCCTCCTCCTCTCTCTGTCTCTCTCTGGCTGTTCTTATCAGTTTACGTTGTCCTCATCGTCGCCGGCGCCGCCCTCCAAAGCTTCATAGATAGCTCGATCGATCGATCCCGTCGTCGTCGATCGTCGTCGACGCAGCAGCCTCGCCGGCGGCCGGAGACTGGGGAGATCGATCGAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTACCGGCCGGCGAGGAGGAGGAAGAAGACCAGCCACCGCCTCCGACACCACCAGCAAAGCAGGAGCAGCAGGACGAGGAGGAGCTCGCCGCGGTCGTCATCAGCGGCGGCGGAGCAGG-AGCAGCTCCGGCGCCGGAG-ACGTACGCGCAGTAC-TAC-TACGCGGCGCGCGCCGAC-CACGACGCCTCCGCCATGGTCACCGCGCTAGCCCACGTCATCCGCGCCGCCCCCGACCTGCACCTCCCCCACCACCCATCCTCCTCCGCCTCCGCCGCCGCCCACCCGCAGCAGGCTTCTTCCTTCTACCCGACCGCCGCCGCCGCCGCCTCCTCGCCGTCCGACCAGCTCGCCGCCGCCGCCGCTGCCGAAGAGCAAGGGAGGAGGCGGCACTACAGAGGTGTTCGACAGCGGCCATGGGGGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGGCGGAGGACGCCGCCATCGCCTACGACGAGGCGGCGCTCCGGTTCAAGGGGACCAAGGCCAAGCTCAACTTCCCCGAGCGCGTCCAGGGCCGCACCGACCTCGGCTTCCTCGTCACCCGTGGCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGGGGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGTACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGACGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGCAGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGACCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTC-AAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAG-TGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTGTTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTTTTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAAGTAAAGCAAAGAGAGAGGATTCTTATTTAATTATTGGTTAAACATTACCCTTTTTTAAGATGAAACATGATGTCTTTTTTTAAAAAAAAAATCTG]

[+] EMBL AK101501             [GGTTAGACTTTTTTTTCCCTTTGCCTATAATAAAGCCATCTCTCATAAAGCCATCGACCTCATCTCCTCCTCCTCCTCTCTCTGTCTCTCTCTGGCTGTTCTTATCAGTTTACGTTGTCCTCATCGTCGCCGGCGCCGCCCTCAAAAGCTTCATAGATAGCTCGATCGATCGATCCCGTCGTCGTCGATCGTCGTCGACGCAGCAGCCTCGCCGGCGGCCGGAGACTGGGGAGATCGATCGAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTACCGGCCGGCGAGGAGGAGGAAGAAGACCAGCCACCGCCTCCGACACCACCAGCAAAGCAGGAGCAGCAGGACGAGGAGGAGCTCGCCGCGGTCGTCATCAGCGGCGGCGGAGCAGG AGCAGCTCCGGCGCCGGAG ACGTACGCGCAGTAC TAC TACGCGGCGCGCGCCGAC CACGACGCCTCCGCCATGGTCACCGCGCTAGCCCACGTCATCCGCGCCGCCCCCGACCTGCACCTCCCCCACCACCCATCCTCCTCCGCCTCCGCCGCCGCCCACCCGCAGCAGGCTTCTTCCTTCTACCCGACCGCCGCCGCCGCCGCCTCCTCGCCGTCCGACCAGCTCGCCGCCGCCGCCGCTGCCGAAGAGCAAGGGAGGAGGCGGCACTACAGAGGTGTTCGACAGCGGCCATGGGGGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGGCGGAGGACGCCGCCATCGCCTACGACGAGGCGGCGCTCCGGTTCAAGGGGACCAAGGCCAAGCTCAACTTCCCCGAGCGCGTCCAGGGCCGCACCGACCTCGGCTTCCTCGTCACCCGTGGCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGGGGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGTACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGACGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGCAGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGACCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTC AAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAG TGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTGTTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTTTTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAAGTAAAGCAAAGAGAGAGGATTCTTATTTAATTATTGGTTAAACATTACCCTTTTTTAAGATGAAACATGATGTCTTTTTTTAAAAAAAAAATCTG]
[+] EMBL CB669183             [                                           CATAAAGCCCTTTACCTCATCTCCTCCTCCTCCTCTCTCTGTCTCTCTCTGGCTGTTCTTATCAGTTTACGTTGTCCTCATCGTCGCCGGCGCCGCCCTCCAAAGCTTCATATATAGCTCGATCGATCGATCCCGTCGTCGTCGATCGTCGTCGACGCAGCAGCCTCGCCGGCGGCCGGAGACTGGGGAGATCGATCGAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTACCGGCCGGCGAGGAGGAGGAAGAAGACCAGCCACCGCCTCCGACACCACCAGCAAAGCAGGAGCAGCAGGACGAGGAGGAGCTCGCCGCGGTCGTCATCAACGGCGGCGGAGCAGG AGCAGCTCCGGCGCCGGAG ACGTACGCGCAGTAC TAC TACGCGGCGCGCGCCGAC CACGACGCCTCCGCCATGGTCACCGCGCTAGCCCACGTCATCCGCGCCGCCCCCGACCTGCACCTCCCCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C27339               [                                                                                      TCTNTNTGGCTGTTCTTATCANTTTACGTTGTCCTCATCGTCGCCGGCGCCGCCCTCCAAAGCTTCATAGATAGCTCGATCGATCGATCCCGTCGTCGTCGATCGTGGTCGACGCAGCAGCCTCGCCGGCGGCCGGAGACTGGGGAGATCGATCGAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTACCGGCCGGCGAGGAGGAGGAAGAAGACCAGCCACCGNCTCCNACACCACCAGCAAAGCAGGAGCAGCAGGACGAGGAGGAGCTCGCCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C27231               [                                                                                                                  TTGTCCTCATCGTCGCCGGCGCCG CCTCCAAAGCTTCATAGATAGCTCGATCGATCGATCCCGTCGTCGTCGATCGTCGTCGA GCAGCAGCCTCGCCGGC NNCGGAGACTGGGGAGATCGATCGAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTACCGGCCGNCGAGGAGGAGGAAGAAGACCAGCCACCGCCTCCGACACCACCAGCAAAGCAGGAGCAGCAGGACGAGGAGGAGCTCGCCGCGGTCGTCATCAGCGGCGGCGGA CAGGNAGCAGCTTCGGCGCGTAAGAACGTACGCGCAGTACTTACTTACGCG  GCGCGCCGACNCACGACGGCTTCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSS1576A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAGGTGTTCGACAGCGGCCATGGGGGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGGCGGAGGACGNCGCCATCGCCTACGACGAGGCGNCGCTCCGGTTCAAGGGGACCAAGGCCAAGNTCAACTTCCCCGAGCNCTTCCAGGGCCGCACCGACCTCNGCTTCCTCGTCACCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF303285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTC AAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAG TGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTGTTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTTTTAGTTTGTTGGTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAAGTA                                                                                            ]
[+] EMBL AU083571             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATGCCATGCATTTGAGAGGAAGAGGTCAAAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTTGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTGTTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTTTTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAAGTAAAGCAAAGAGAGAGGATTCTTATTTA                                                                  ]
[+] EMBL AU181689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCCTCGGCACGTGGACAGAAAGAGATCAAG TGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTGTTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTTTTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAAGTAAAGCAAAGAGAGAGGATTCTTATTTAATTATTGGTTAAACATTACCC TTTTTAAGATGAAACATGATGTCTTTTTTTAAAAA         ]
[+] EMBL AU092485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTTTTCTTTTGATCNCCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTGTTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTTTTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAAGTAAAGCAAAGAGAGAGGATTCTTATTTAATTATTGGTTAAACATTACCCTTTTTTAAGATGAAACATGATGTCTTTTTTTAAAAA         ]




>consensus_13451#0
GGTTAGACTTTTTTTTCCCTTTGCCTATAATAAAGCCATCTCTCATAAAGCCATCGACCT
CATCTCCTCCTCCTCCTCTCTCTGTCTCTCTCTGGCTGTTCTTATCAGTTTACGTTGTCC
TCATCGTCGCCGGCGCCGCCCTCCAAAGCTTCATAGATAGCTCGATCGATCGATCCCGTC
GTCGTCGATCGTCGTCGACGCAGCAGCCTCGCCGGCGGCCGGAGACTGGGGAGATCGATC
GAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTAC
CGGCCGGCGAGGAGGAGGAAGAAGACCAGCCACCGCCTCCGACACCACCAGCAAAGCAGG
AGCAGCAGGACGAGGAGGAGCTCGCCGCGGTCGTCATCAGCGGCGGCGGAGCAGGAGCAG
CTCCGGCGCCGGAGACGTACGCGCAGTACTACTACGCGGCGCGCGCCGACCACGACGCCT
CCGCCATGGTCACCGCGCTAGCCCACGTCATCCGCGCCGCCCCCGACCTGCACCTCCCCC
ACCACCCATCCTCCTCCGCCTCCGCCGCCGCCCACCCGCAGCAGGCTTCTTCCTTCTACC
CGACCGCCGCCGCCGCCGCCTCCTCGCCGTCCGACCAGCTCGCCGCCGCCGCCGCTGCCG
AAGAGCAAGGGAGGAGGCGGCACTACAGAGGTGTTCGACAGCGGCCATGGGGGAAGTGGG
CGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGG
CGGAGGACGCCGCCATCGCCTACGACGAGGCGGCGCTCCGGTTCAAGGGGACCAAGGCCA
AGCTCAACTTCCCCGAGCGCGTCCAGGGCCGCACCGACCTCGGCTTCCTCGTCACCCGTG
GCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGG
GGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGT
ACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGA
CGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGC
AGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGA
CCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCT
CGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATG
AATATGCCATGCATTTGAGAGGAAGAGGTCAAGTTTTTTTTTAAGCAATGGAAATGGATT
ACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATG
TTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCA
TGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGA
CATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTG
TTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTT
TTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAA
GTAAAGCAAAGAGAGAGGATTCTTATTTAATTATTGGTTAAACATTACCCTTTTTTAAGA
TGAAACATGATGTCTTTTTTTAAAAAAAAAATCTG

consensusID : consensus_13451#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 713
fasta sequence

                              [CCGACCTCGGCTTCCTCGTCACCCGTGGCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGGGGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGTACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGACGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGCAGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGACCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTCAAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTAAAAAAAAGA]

[-] EMBL CB669184             [CCGACCTCGGCTTCCTCGTCACCCGTGGCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGGGGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGTACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGACGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGCAGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGACCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTCAAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTAAAAAAAAGA]
[+] EMBL CF306624             [                                                                                                                                                                                                          CGCGACGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGCAGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGACCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTCAAG TTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAAT                                                                                           ]
[+] EMBL OS1321806            [                                                                                                                                                                                                                                                                                                                                                                                                                                                           CATGAATATGCCATGCATTTGAGAGGAAGAGGTCAAGTTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGACATTA                     ]




>consensus_13451#1
CCGACCTCGGCTTCCTCGTCACCCGTGGCATCCCCCCCGCCGCCACCCACGGTGGCGGCT
ACTACCCCTCGTCGTCGCCGGCGGCGGGGGCATGCCCCCCGCCGCGGCAGCAGCAGACGG
TCGTGCCGTACCCGGACCTCATGCGGTACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCA
GTTACATGCCGTTCGGCGGCGCCGCGACGATGTCGTCGTCGACGGTGTCGTCCTCGTCGG
CGCCGCAGATACTCGACTTCTCGACGCAGCAGCTCATCCGGGCCGGCCCGCCGTCACCAA
TGCCATCGTCGGGCTCCGGCTCGGCGACCGCGGCGGCGTCGTCCACGACGTCGGCGTCGT
CGCCCGGTGCATGGCCGTACGGCGGCTCGGAGCGCAAGAAGAAGGATTCGTCGTCGTGAC
GTCACTGGATGGATCGATCGATGCATGAATATGCCATGCATTTGAGAGGAAGAGGTCAAG
TTTTTTTTTAAGCAATGGAAATGGATTACATCTTCGGCCTCGGCACGTGGACAGAAAGAG
ATCAAGTGATATGGATCGAGAAGAATGTTTAGCTGATCTGCTCTTTACTCTGCACGATCG
AGGAGATGAAAATGCATGCAATATGCATGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGA
TTTTTGCGGGTTAATTAATTACATGGACATTAATTTTTCTTTTAAAAAAAAGA

consensusID : consensus_13451#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 206
fasta sequence

                              [GGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGGCGGAGGACGCCATCGCCTACGACGAGGCGTCCGTTCAAGGGGACCAAGGCCAAGCTCAACTTCCCCNAGCNCNTCCAGGGCCGCACCGACCTCNGCTTCCTCGTCACCCGTGGCATCCCCCCCCCNNNNCACCCACN]

[+] EMBL D42470               [GGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGGCGGAGGACGCCATCGCCTACGACGAGGCGTCCGTTCAAGGGGACCAAGGCCAAGCTCAACTTCCCCNAGCNCNTCCAGGGCCGCACCGACCTCNGCTTCCTCGTCACCCGTGGCATCCCCCCCCCNNNNCACCCACN]




>consensus_13451#2
GGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGT
TCGACACGGCGGAGGACGCCATCGCCTACGACGAGGCGTCCGTTCAAGGGGACCAAGGCC
AAGCTCAACTTCCCCNAGCNCNTCCAGGGCCGCACCGACCTCNGCTTCCTCGTCACCCGT
GGCATCCCCCCCCCNNNNCACCCACN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13451#0      GGTTAGACTTTTTTTTCCCTTTGCCTATAATAAAGCCATCTCTCATAAAGCCATCGACCT 60
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CATCTCCTCCTCCTCCTCTCTCTGTCTCTCTCTGGCTGTTCTTATCAGTTTACGTTGTCC 120
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      TCATCGTCGCCGGCGCCGCCCTCCAAAGCTTCATAGATAGCTCGATCGATCGATCCCGTC 180
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      GTCGTCGATCGTCGTCGACGCAGCAGCCTCGCCGGCGGCCGGAGACTGGGGAGATCGATC 240
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      GAGAGGGAGGGAGGTTGAGTAAGGTGGATCCACGGGTCAGGCATGGCAAGAGGCCCCTAC 300
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CGGCCGGCGAGGAGGAGGAAGAAGACCAGCCACCGCCTCCGACACCACCAGCAAAGCAGG 360
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      AGCAGCAGGACGAGGAGGAGCTCGCCGCGGTCGTCATCAGCGGCGGCGGAGCAGGAGCAG 420
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CTCCGGCGCCGGAGACGTACGCGCAGTACTACTACGCGGCGCGCGCCGACCACGACGCCT 480
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CCGCCATGGTCACCGCGCTAGCCCACGTCATCCGCGCCGCCCCCGACCTGCACCTCCCCC 540
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      ACCACCCATCCTCCTCCGCCTCCGCCGCCGCCCACCCGCAGCAGGCTTCTTCCTTCTACC 600
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CGACCGCCGCCGCCGCCGCCTCCTCGCCGTCCGACCAGCTCGCCGCCGCCGCCGCTGCCG 660
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      AAGAGCAAGGGAGGAGGCGGCACTACAGAGGTGTTCGACAGCGGCCATGGGGGAAGTGGG 720
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CGGCGGAGATAAGGGACCCGAAGAAGGCGGCGAGGGTGTGGCTGGGGACGTTCGACACGG 780
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CGGAGGACGCCGCCATCGCCTACGACGAGGCGGCGCTCCGGTTCAAGGGGACCAAGGCCA 840
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      AGCTCAACTTCCCCGAGCGCGTCCAGGGCCGCACCGACCTCGGCTTCCTCGTCACCCGTG 900
consensus_13451#1      ---------------------------------CCGACCTCGGCTTCCTCGTCACCCGTG 27
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      GCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGG 960
consensus_13451#1      GCATCCCCCCCGCCGCCACCCACGGTGGCGGCTACTACCCCTCGTCGTCGCCGGCGGCGG 87
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      GGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGT 1020
consensus_13451#1      GGGCATGCCCCCCGCCGCGGCAGCAGCAGACGGTCGTGCCGTACCCGGACCTCATGCGGT 147
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      ACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGA 1080
consensus_13451#1      ACGCGCAGCTGCTGCAGGGCGGCGTCGGCGGCAGTTACATGCCGTTCGGCGGCGCCGCGA 207
consensus_13451#2      -------------------GGAAGTGGGCGGCGGAGATAAGGGACCCGAAGAAG--GCGG 39
                                           *  ** ****** *  * * *     **  *  *  *** 

consensus_13451#0      CGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGC 1140
consensus_13451#1      CGATGTCGTCGTCGACGGTGTCGTCCTCGTCGGCGCCGCAGATACTCGACTTCTCGACGC 267
consensus_13451#2      CGAGGGTGTGGCTGGGGACGT-----TCGACACGGCGGAGGACGCCATCGCCTACGACGA 94
                       *** *  ** *  *  *  **     *** *   ** *  **  *         ***** 

consensus_13451#0      AGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGA 1200
consensus_13451#1      AGCAGCTCATCCGGGCCGGCCCGCCGTCACCAATGCCATCGTCGGGCTCCGGCTCGGCGA 327
consensus_13451#2      GGCGTCCGTTCAAGG--GGACCAAGGCCAAGCTCAACTTCCCCNAGCNCNTCCAGGGCCG 152
                        **  *   **  **  ** **   * **       * **  *  ** *   *  ***  

consensus_13451#0      CCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCT 1260
consensus_13451#1      CCGCGGCGGCGTCGTCCACGACGTCGGCGTCGTCGCCCGGTGCATGGCCGTACGGCGGCT 387
consensus_13451#2      CACCGACCTCNGCTTCCTCGTCACCCGTGGCATCCCCCCCCCNNNNCACCCACN------ 206
                       *  ** *  *  * *** ** *  * * * * ** ***          *  **       

consensus_13451#0      CGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATG 1320
consensus_13451#1      CGGAGCGCAAGAAGAAGGATTCGTCGTCGTGACGTCACTGGATGGATCGATCGATGCATG 447
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      AATATGCCATGCATTTGAGAGGAAGAGGTCAAGTTTTTTTTTAAGCAATGGAAATGGATT 1380
consensus_13451#1      AATATGCCATGCATTTGAGAGGAAGAGGTCAAGTTTTTTTTTAAGCAATGGAAATGGATT 507
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      ACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATG 1440
consensus_13451#1      ACATCTTCGGCCTCGGCACGTGGACAGAAAGAGATCAAGTGATATGGATCGAGAAGAATG 567
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      TTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCA 1500
consensus_13451#1      TTTAGCTGATCTGCTCTTTACTCTGCACGATCGAGGAGATGAAAATGCATGCAATATGCA 627
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      TGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGA 1560
consensus_13451#1      TGGAGGGGTAAGTGTTAAGTGGTTAATTGGTGATTTTTGCGGGTTAATTAATTACATGGA 687
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      CATTAATTTTTCTTTTGATCACCTTTTGTTTATTTTTTCTCTGAAAACTATCTTCTTTTG 1620
consensus_13451#1      CATTAATTTTTCTTTTAAAAAAAAGA---------------------------------- 713
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      TTCATTTTTATTTTCTTGGAGGTACTTAATTAATTAGCTAGGTTAATTAGCTGGTGATTT 1680
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      TTAGTTTGTTGTTTCCCTCCTTTTGTTCAAGTGTGAACTAATTGTGCAAAATTAGTCCAA 1740
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      GTAAAGCAAAGAGAGAGGATTCTTATTTAATTATTGGTTAAACATTACCCTTTTTTAAGA 1800
consensus_13451#1      ------------------------------------------------------------
consensus_13451#2      ------------------------------------------------------------
                                                                                   

consensus_13451#0      TGAAACATGATGTCTTTTTTTAAAAAAAAAATCTG 1835
consensus_13451#1      -----------------------------------
consensus_13451#2      -----------------------------------