These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13455#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2215 fasta sequence [TCACCTGCTCATTTTTTATTTCCCAAATTATAAAACCTTTTCTTTTTTGTTCCCCAAAGATTACGTGCTAGTAGGGGCGTTAAGAAAAAGGAAAAGAAAGAGAAGGAAAAAAAAAACGGAGAGAGAAAAATTGGAGAGGCGGGCGAGTTAGGGGAATTTACGTAGGAGACAAGCGAAATCCCTAAATTTTCTCTCCTCTCCTCGCGAGTTGTTTTGAGTGAGTTTCTGCGAGTGCTCTTGAGCTTCCATCTTTCCGCATAAGGCTTTGCAAGCTTTGCTCTAGCC-TTTTTTTTTTTGTTCAGATTATTTTCTTGCGGTTTGTTCTTAAGTACTCGCTAGTGTCCCTAATTTCCTGGTAATTTCTTGGTAATTTTTGGCTGCTTACTTTGCTCGAGCTGGGATCTGTGTTTCAGTGCTCACTTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGCAGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAGGTGAGGGCGTCGTCGGAGATGGCGGGAGGAAGGGAGCCGTTCGTGCTGCCCAAGAGCCCGCCGGCGGCGGCGCCTGCGCCGCCGCCGCCGTCGTCCGGCGGCATGCAGAGCGTGCGCATGGCGTACACGGCGGACGGCACGCCCATCTTCGCTCCGGTGAACTCCGCCCCGGCCCCGGCCCCGGCGGCGACGTACCCGCCCGCAGGAGGCAATGGCGCGGCGGCTCTCGACGCCGGCGAGCCGGTGGTCAAGAAGAAGCGTGGCCGGCCAAGGAAGTACGGCCCCGACGGCTCCATGTCGCTGGCATTGGTGCCCGTGTCCACCGCGGCGGTGGCGGCCTCCGGGCCTTTCTCGCCGGCGGCTGCCGCGAAGTCGCCGGACGCCGTGTCGTCGGCGCCGCCGCCGGGGGCGAAGAAGAGGGGGCGGCCAAAGGGCTCCACGAACAAGAAGCACGTGCCCTCTTTCGGAATTGGAGATATCGGGTCAGCAGGAGCTGGATTCACACCTCATGTTATTTTTGTTAAAGCTGGAGAGGATGTATCTGCAAAGATCATGTCATTCTCCCAGCATGGAACTCGTGGAGTATGCGTTCTGTCAGCAAACGGCGCCATATCAAATGTGACACTTCGGCAAGCTGCTACTTCCGGTGGAACAGTAACATACGAGGGACGATTTGAGATACTGTCGCTGTCCGGTTCATTCCTTCTATCAGAGAATGGAGGCCATCGTAGTCGAACTGGTGGGCTCAGTGTTTCTCTAGCAGGCCCTGATGGTCGCGTCTTGGGTGGTGGAGTTGCTGGACTTCTGACAGCTGCTTCACCAGTGCAGATTGTGGTGGGAAGCTTCAACACCGAAGGGAAAAAGGGGCCAAAGCTGCATGC-TCCTTCA-GA-CCCAATGTCTGCA-CCG-CTAA-A-GATGGTG--CCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCAAGGGGCACATTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTCACGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATCCTGGAAGTGAGCT-CCTCCTCC-TCATCAT-C-ATCAGTGACCAGACCTTGGTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGTGGCGGTGGTACTCGAGGTACTCCGGTGCGACGCCATGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTTATCTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCATGTTGCGGTTAGCTTGTGGCTCAGTTCTTTAGCGGCCTGGTAAAAAAAA] [+] EMBL AK101825 [TCACCTGCTCATTTTTTATTTCCCAAATTATAAAACCTTTTCTTTTTTGTTCCCCAAAGATTACGTGCTAGTAGGGGCGTTAAGAAAAAGGAAAAGAAAGAGAAGGAAAAAAAAAACGGAGAGAGAAAAATTGGAGAGGCGGGCGAGTTAGGGGAATTTACGTAGGAGACAAGCGAAATCCCTAAATTTTCTCTCCTCTCCTCGCGAGTTGTTTTGAGTGAGTTTCTGCGAGTGCTCTTGAGCTTCCATCTTTCCGCATAAGGCTTTGCAAGCTTTGCTCTAGCC TTTTTTTTTTGTTCAGATTATTTTCTTGCGGTTTGTTCTTAAGTACTCGCTAGTGTCCCTAATTTCCTGGTAATTTCTTGGTAATTTTTGGCTGCTTACTTTGCTCGAGCTGGGATCTGTGTTTCAGTGCTCACTTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGCAGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAGGTGAGGGCGTCGTCGGAGATGGCGGGAGGAAGGGAGCCGTTCGTGCTGCCCAAGAGCCCGCCGGCGGCGGCGCCTGCGCCGCCGCCGCCGTCGTCCGGCGGCATGCAGAGCGTGCGCATGGCGTACACGGCGGACGGCACGCCCATCTTCGCTCCGGTGAACTCCGCCCCGGCCCCGGCCCCGGCGGCGACGTACCCGCCCGCAGGAGGCAATGGCGCGGCGGCTCTCGACGCCGGCGAGCCGGTGGTCAAGAAGAAGCGTGGCCGGCCAAGGAAGTACGGCCCCGACGGCTCCATGTCGCTGGCATTGGTGCCCGTGTCCACCGCGGCGGTGGCGGCCTCCGGGCCTTTCTCGCCGGCGGCTGCCGCGAAGTCGCCGGACGCCGTGTCGTCGGCGCCGCCGCCGGGGGCGAAGAAGAGGGGGCGGCCAAAGGGCTCCACGAACAAGAAGCACGTGCCCTCTTTCGGAATTGGAGATATCGGGTCAGCAGGAGCTGGATTCACACCTCATGTTATTTTTGTTAAAGCTGGAGAGGATGTATCTGCAAAGATCATGTCATTCTCCCAGCATGGAACTCGTGGAGTATGCGTTCTGTCAGCAAACGGCGCCATATCAAATGTGACACTTCGGCAAGCTGCTACTTCCGGTGGAACAGTAACATACGAGGGACGATTTGAGATACTGTCGCTGTCCGGTTCATTCCTTCTATCAGAGAATGGAGGCCATCGTAGTCGAACTGGTGGGCTCAGTGTTTCTCTAGCAGGCCCTGATGGTCGCGTCTTGGGTGGTGGAGTTGCTGGACTTCTGACAGCTGCTTCACCAGTGCAGATTGTGGTGGGAAGCTTCAACACCGAAGGGAAAAAGGGGCCAAAGCTGCAAGC TCCTTCA GA CCCAATGTCTGCA CCG CTAA A GATGGTG CCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCAAGGGGCACATTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTCACGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATCCTGGAAGTGAGCT CCTCCTCC TCATCAT C ATCAGTGACCAGACCTTGGTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGTGGCGGTGGTACTCGAGGTACTCCGGTGCGACGCCATGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTTATCTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCA ] [+] EMBL CB672070 [ GAGAAGGAATAAAAAAACGGAGAGAGAAAAATTGGAGAGGCGGGCGAGTTAGGGGAATTTACGTAGGAGACAAGCGAAATCCCTAAATTTTCTCTCCTCTCCTCGCGAGTTGTTTTGAGTGAGTTTCTGCGAGTGCTCTTGAGCTTCCATCTTTCCGCATAAGGCTTTGCAAGCTTTGCTCTAGCCTTTTTTTTTTTTGTTCAGATTATTTTCTTGCGGTTTGTTCTTAAGTACTCGCTAGTGTCCCTAATTTCCTGGTAATTTCTTGGTAATTTTTGGCTGCTTACTTTGCTCGAGCTGGGATCTGTGTTTCAGTGCTCACTTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGCAGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAG ] [+] EMBL AK105419 [ TAGCC TTTTTTTTTTTGTTCAGATTATTTTCTTGCGGTTTGTTCTTAAGTACTCGCTAGTGTCCCTAATTTCCTGGTAATTTCTTGGTAATTTTTGGCTGCTTACTTTGCTCGAGCTGGGATCTGTGTTTCAGTGCTCACTTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGCAGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAGGTGAGGGCGTCGTCGGAGATGGCGGGAGGAAGGGAGCCGTTCGTGCTGCCCAAGAGCCCGCCGGCGGCGGCGCCTGCGCCGCCGCCGCCGTCGTCCGGCGGCATGCAGAGCGTGCGCATGGCGTACACGGCGGACGGCACGCCCATCTTCGCTCCGGTGAACTCCGCCCCGGCCCCGGCCCCGGCGGCGACGTACCCGCCCGCAGGAGGCAATGGCGCGGCGGCTCTCGACGCCGGCGAGCCGGTGGTCAAGAAGAAGCGTGGCCGGCCAAGGAAGTACGGCCCCGACGGCTCCATGTCGCTGGCATTGGTGCCCGTGTCCACCGCGGCGGTGGCGGCCTCCGGGCCTTTCTCGCCGGCGGCTGCCGCGAAGTCGCCGGACGCCGTGTCGTCGGCGCCGCCGCCGGGGGCGAAGAAGAGGGGGCGGCCAAAGGGCTCCACGAACAAGAAGCACGTGCCCTCTTTCGGAATTGGAGATATCGGGTCAGCAGGAGCTGGATTCACACCTCATGTTATTTTTGTTAAAGCTGGAGAGGATGTATCTGCAAAGATCATGTCATTCTCCCAGCATGGAACTCGTGGAGTATGCGTTCTGTCAGCAAACGGCGCCATATCAAATGTGACACTTCGGCAAGCTGCTACTTCCGGTGGAACAGTAACATACGAGGGACGATTTGAGATACTGTCGCTGTCCGGTTCATTCCTTCTATCAGAGAATGGAGGCCATCGTAGTCGAACTGGTGGGCTCAGTGTTTCTCTAGCAGGCCCTGATGGTCGCGTCTTGGGTGGTGGAGTTGCTGGACTTCTGACAGCTGCTTCACCAGTGCAGATTGTGGTGGGAAGCTTCAACACCGAAGGGAAAAAGGGGCCAAAGCTGCATGC TCCTTCA GA CCCAATGTCTGCA CCG CTAA A GATGGTG CCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCAAGGGGCACATTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTCACGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATCCTGGAAGTGAGCT CCTCCTCC TCATCAT C ATCAGTGACCAGACCTTGGTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGTGGCGGTGGTACTCGAGGTACTCCGGTGCGACGCCATGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTTATCTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCATGTTGCGGTTAGCTTGTGGCT ] [+] EMBL CB637809 [ ATTTTCTTGCGGTTTGTTCTTAAGTACTCGCTAGTGTCCCTAATTTCCTGGTAATTTCTTGGTAATTTTTGGCTGCTTACTTTGCTCGAGCTGGGATCTGTGTTTCAGTGCTCACTTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGCAACTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAACTTCTGCGAGAGAAGGTGTGGGAATGATGGAAGTGACTTAAGTGAGGGCGTCtcctg ] [+] EMBL C72183 [ AGTGCTCACTTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGNGGTTTATGGTGGTTTTTGCAGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAGGTGAGGGCGTCGTCGGAGATGGCGGGAGGAAGGGAGCCGTTCGTGCTG CCAAGAGCCCGCC GCG GGCGCCTGCG ] [+] EMBL CB639399 [ CAGCTATTTTTCCGTTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCTCCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAATCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGCAGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGAGTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAGGTGAGGGCGTCGTCGGAGAT ] [-] EMBL CB672071 [ GCCGCGAAGTCGCCGGACGCCGTGTCGTCGGCGCCGCCGCCGGGGGCGAAGAAGAGGGGGCGGCCAAAGGGCTCCACGAACAAGAAGCACGTGCCCTCTTTCGGAATTGGAGATATCGGGTCAGCAGGAGCTGGATTCACACCTCATGTTATTTTTGTTAAAGCTGGAGAGGATGTATCTGCAAAGATCATGTCATTCTCCCAGCATGGAACTCGTGGAGTATGCGTTCTGTCAGCAAACGGCGCCATATCAAATGTGACACTTCGGCAAGCTGCTACTTCCGGTGGAACAGTAACATACGAGGGACGATTTGAGATACTGTCGCTGTCCGGTTCATTCCTTCTATCAGAGAATGGAGGCCATCGTAGTCGAACTGGTGGGCTCAGTGTTTCTCTAGCAGGCCCTGATGGTCGCGTCTTGGGTGGTGGAGTTGCTGGACTTCTGACAGCTGCTTCACCAGTGCAGATTGTCGTGGGAAGCTTCAACACCGAAGGGAAAAAGGGGCCAAAGCTGCATGC TCCTTCA GA CCCAATGTCTGCA CCG CTAA A GATGGTG CCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCAAGGGGCACATTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTCACGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATCCTGGAAGTGAGCT CCTCCTCC TCATCAT C ATCAGTGACCAGACCTTGGTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGTGG ] [-] EMBL CB637810 [ AGATTGTGGTGGGAAGCTTCAACACCGAAGGGAAAAAGGGGCCAAAGCTGCATGC TCCTTCA GA CCCAATGTCTGCA CCG CTAA A GATGGTG CCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCAAGGGGCACATTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGTTGAACCAAGGTGTCACGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATCCTGGAAGTGAGCT CCTCCTCC TCATCAT C ATCAGTGACCAGACCTTGGTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGTGGCGGTGGTACTCGAGGTACTCCGGTGCGACGCCATGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTT TCTTCCAGACACCGATGAAAAAACTCA TGCTTCT ] [+] EMBL BI807987 [ TGCTTCCTTCAGGACCCCTATGTCTGCACCCGTCTAATAGGATGGTGCCCCGATGAGC GGAC GGGCCAA CAGCCCGCCATCGAGGGGCACATTGAGTGAATCATC GGC GCCCGGGGAGCCCGCTGAACCAAGGTGTCACGGCCAGCAACCAT GCCAGCCAGGGCTACCCAGCTTATCCTGGAAGTGAGCT CCTCCTCC TCATCAT C ATCAGTGACCAGACCTTGGTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGT GCGGTGGTACTCGAGGTACTCCGGTGCGACGCCATGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTCTATCTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCATGTTGCGGTTAaaaaaa ] [+] EMBL BI807812 [ AGTGAGCTGCCTCCTCCGTCATCATGCGATCAGTGACCAGACCTT GTCCCGTCTGACCGCCGTAGAACTTGCGAAAGGAAATGTCGTGGCGGTGGTACTCGAGGTACTCCGGTGCGACGCCATGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTC ATGTGTTATTTAGGTGGTTAAATTGTTTTTCTATCTTCCAGACAC ] [-] EMBL AU225272 [ CTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTTATCTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCATGTTGCGGTTAGCTTGTGGCTCAGTTCTTTAGCGGC ] [+] EMBL AU082939 [ AATGTCTGAACCTGAATCAGGGAAGAAAACTGTAGCCGTTGCATCTCTAGCTAGCTCTTCTGGTGTAGGTGCTGTTACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTTATCTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCATGTTGCGGTTAGCTTGTGGCTCAGTTCTTTTACCTTCTGGTAAAAAAAA] consensusID : consensus_13455#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence [CACCNTTCTTNGGGTCGGGTGGATTCTGGAACTTTCGGACANTGGCGTTGCACCAGGCCAGATTGTGTGTGGGAAGNTTCTACACCCGAAGGGAAAAAGGGGCCCAAAGCTGCATGGCTCCTTCAGACCCAATGTCTGCACCGTCTAGAAGATGGTGCCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCGAGGGGCACANTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTCACAGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATTCCGTGGAAGTGAGCTCCTCCTCCGTCAGTCANTCAGTCACGTGATCCAGACCCTGTGGTCCCGTCTGACCGCCGTAGAACTTGCCGAAAGGAAATGTTCGTGGCGGTGGATACTCGAGGTATCTCCGGTGCTGACGCCCACTGGATCCTAACTAGCCCCCCTATTTAGTGTAATGTCTGAACCTGAATCACGGGAAGAAAACTGTACCCGTTGCATCTCTAGCCTAGTCTCTTCTGGTGTAGGTGCTGTTAACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTCTATACTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAAAAAAAAAA] [+] EMBL BQ907112 [CACCNTTCTTNGGGTCGGGTGGATTCTGGAACTTTCGGACANTGGCGTTGCACCAGGCCAGATTGTGTGTGGGAAGNTTCTACACCCGAAGGGAAAAAGGGGCCCAAAGCTGCATGGCTCCTTCAGACCCAATGTCTGCACCGTCTAGAAGATGGTGCCGATGAGCGGGACGGGGCCAAGCAGCCCGCCATCGAGGGGCACANTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTCACAGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATTCCGTGGAAGTGAGCTCCTCCTCCGTCAGTCANTCAGTCACGTGATCCAGACCCTGTGGTCCCGTCTGACCGCCGTAGAACTTGCCGAAAGGAAATGTTCGTGGCGGTGGATACTCGAGGTATCTCCGGTGCTGACGCCCACTGGATCCTAACTAGCCCCCCTATTTAGTGTAATGTCTGAACCTGAATCACGGGAAGAAAACTGTACCCGTTGCATCTCTAGCCTAGTCTCTTCTGGTGTAGGTGCTGTTAACTATTGGAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTCTATACTTCCAGACACCGATGAAAAAGCTCATTGCTTCTATGTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13455#0 TCACCTGCTCATTTTTTATTTCCCAAATTATAAAACCTTTTCTTTTTTGTTCCCCAAAGA 60 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TTACGTGCTAGTAGGGGCGTTAAGAAAAAGGAAAAGAAAGAGAAGGAAAAAAAAAACGGA 120 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 GAGAGAAAAATTGGAGAGGCGGGCGAGTTAGGGGAATTTACGTAGGAGACAAGCGAAATC 180 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CCTAAATTTTCTCTCCTCTCCTCGCGAGTTGTTTTGAGTGAGTTTCTGCGAGTGCTCTTG 240 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 AGCTTCCATCTTTCCGCATAAGGCTTTGCAAGCTTTGCTCTAGCCTTTTTTTTTTTGTTC 300 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 AGATTATTTTCTTGCGGTTTGTTCTTAAGTACTCGCTAGTGTCCCTAATTTCCTGGTAAT 360 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TTCTTGGTAATTTTTGGCTGCTTACTTTGCTCGAGCTGGGATCTGTGTTTCAGTGCTCAC 420 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TTGCTAAATCCGAACCAAATTAAACCTTGGATTTTAAAACTCCTTCCAGCTATTTTTCCG 480 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TTTTTATTTGGGAAATTGTGGGTTTACCATTTCTTCCTCCGATTTTCTTTTCCATTTTCT 540 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CCCCTCATTTGAGCTTCCTTCTCACCCATTCCAAGAAATCACCATCCTTCCGCTGTAAAA 600 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TCGTTGAAAAAAAAATTGTTCCACAGCTTTGAGCAGCGCGGGGTTTATGGTGGTTTTTGC 660 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 AGCTCTCGTCTTCTTCCTCAGCTCGCCTTGAAATTTCGGTCCAAGAAATCACTGAGCTGA 720 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 GTGAGCTGCTGAGCTGAGCTTCTGCGAGAGAAGGTGTGGGAATGATGGAGGTGACTCAGG 780 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TGAGGGCGTCGTCGGAGATGGCGGGAGGAAGGGAGCCGTTCGTGCTGCCCAAGAGCCCGC 840 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CGGCGGCGGCGCCTGCGCCGCCGCCGCCGTCGTCCGGCGGCATGCAGAGCGTGCGCATGG 900 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CGTACACGGCGGACGGCACGCCCATCTTCGCTCCGGTGAACTCCGCCCCGGCCCCGGCCC 960 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CGGCGGCGACGTACCCGCCCGCAGGAGGCAATGGCGCGGCGGCTCTCGACGCCGGCGAGC 1020 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CGGTGGTCAAGAAGAAGCGTGGCCGGCCAAGGAAGTACGGCCCCGACGGCTCCATGTCGC 1080 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 TGGCATTGGTGCCCGTGTCCACCGCGGCGGTGGCGGCCTCCGGGCCTTTCTCGCCGGCGG 1140 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CTGCCGCGAAGTCGCCGGACGCCGTGTCGTCGGCGCCGCCGCCGGGGGCGAAGAAGAGGG 1200 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 GGCGGCCAAAGGGCTCCACGAACAAGAAGCACGTGCCCTCTTTCGGAATTGGAGATATCG 1260 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 GGTCAGCAGGAGCTGGATTCACACCTCATGTTATTTTTGTTAAAGCTGGAGAGGATGTAT 1320 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 CTGCAAAGATCATGTCATTCTCCCAGCATGGAACTCGTGGAGTATGCGTTCTGTCAGCAA 1380 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 ACGGCGCCATATCAAATGTGACACTTCGGCAAGCTGCTACTTCCGGTGGAACAGTAACAT 1440 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 ACGAGGGACGATTTGAGATACTGTCGCTGTCCGGTTCATTCCTTCTATCAGAGAATGGAG 1500 consensus_13455#1 ------------------------------------------------------------ consensus_13455#0 GCCATCGTAGTCGAACTGGTGGGCTCAGTGTTTCTCTAGCAGGCCCTGATGGTCGCGTCT 1560 consensus_13455#1 --------------------------------------------------CACCNTTCTT 10 * * consensus_13455#0 TGGGTGGTGGAGTTGCTGGA--CTTCTGACAGCTGCTT--CACCAGTGCAGATTGTG-GT 1615 consensus_13455#1 NGGGTCGGGTGGATTCTGGAACTTTCGGACANTGGCGTTGCACCAGGCCAGATTGTGTGT 70 **** * * * * ***** *** **** ** * ****** ********* ** consensus_13455#0 GGGAAGCTTCAACACC-GAAGGGAAAAAGGGGCC-AAAGCTGCATG-CTCCTTCAGACCC 1672 consensus_13455#1 GGGAAGNTTCTACACCCGAAGGGAAAAAGGGGCCCAAAGCTGCATGGCTCCTTCAGACCC 130 ****** *** ***** ***************** *********** ************* consensus_13455#0 AATGTCTGCACCGCT--AAAGATGGTGCCGATGAGCGGGACGGGGCCAAGCAGCCCGCCA 1730 consensus_13455#1 AATGTCTGCACCGTCTAGAAGATGGTGCCGATGAGCGGGACGGGGCCAAGCAGCCCGCCA 190 ************* ****************************************** consensus_13455#0 TCAAGGGGCACATTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTC 1790 consensus_13455#1 TCGAGGGGCACANTGAGTGAATCATCGGGCGGCCCGGGGAGCCCGCTGAACCAAGGTGTC 250 ** ********* *********************************************** consensus_13455#0 AC-GGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATCC--TGGAAGTGAGCTCCT 1847 consensus_13455#1 ACAGGCCAGCAACCATGGCCAGCCAGGGCTACCCAGCTTATTCCGTGGAAGTGAGCTCCT 310 ** ************************************** * *************** consensus_13455#0 CCTCC-TCA-TCATC--ATCA-GTGA-CCAGACCTTG--GTCCCGTCTGACCGCCGTAGA 1899 consensus_13455#1 CCTCCGTCAGTCANTCAGTCACGTGATCCAGACCCTGTGGTCCCGTCTGACCGCCGTAGA 370 ***** *** *** *** **** ******* ** ********************* consensus_13455#0 ACTTGC-GAAAGGAAATGT-CGTGGCGGTGG-TACTCGAGGTA-CTCCGGTGC-GACGCC 1954 consensus_13455#1 ACTTGCCGAAAGGAAATGTTCGTGGCGGTGGATACTCGAGGTATCTCCGGTGCTGACGCC 430 ****** ************ *********** *********** ********* ****** consensus_13455#0 A--TGGATCCTAACTAGCCCCCCTATCTAGTGTAATGTCTGAACCTGAATCA-GGGAAGA 2011 consensus_13455#1 CACTGGATCCTAACTAGCCCCCCTATTTAGTGTAATGTCTGAACCTGAATCACGGGAAGA 490 *********************** ************************* ******* consensus_13455#0 AAACTGTAGCCGTTGCATCTCTAGC-TAG-CTCTTCTGGTGTAGGTGCTGTTA-CTATTG 2068 consensus_13455#1 AAACTGTACCCGTTGCATCTCTAGCCTAGTCTCTTCTGGTGTAGGTGCTGTTAACTATTG 550 ******** **************** *** *********************** ****** consensus_13455#0 GAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTTTAT-CTTCCAGACACC 2127 consensus_13455#1 GAGACTAGACTCAATGTGTTATTTAGGTGGTTAAATTGTTTTTCTATACTTCCAGACACC 610 ******************************************* *** ************ consensus_13455#0 GATGAAAAAGCTCATTGCTTCTATGTAACTATGTTGGCATGTTGCGGTTAGCTTGTGGCT 2187 consensus_13455#1 GATGAAAAAGCTCATTGCTTCTATGTAAAAAAAAAA------------------------ 646 **************************** * consensus_13455#0 CAGTTCTTTAGCGGCCTGGTAAAAAAAA 2215 consensus_13455#1 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||