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Oryza sativa
cluster # 13473 cluster # 13473       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13473#0 length = 1584 sequences # 12  
consensus_13473#1 length = 248 sequences # 1  

consensusID : consensus_13473#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1584
fasta sequence
                              [CGCCCACGCGTCCNCCCACTTCTCGAACCTTCTCCGCCTCTCCTCTCTTCCTCCCCACCTCCGTCTCCTCTCTTCCGCACCGGCGAATCCCCAGGCGAGCCTTCTAGAACCTTCGATTGCTCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCGACCGTCATGCAGAAGATCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTTTCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTACAAAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGAAAGGGTAGAGGAAGGC-AGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTTCTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTTGGCATTAGGTTGAACAAGACACCCCCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGCATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATCTGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAG-CAGATGATCTCATAGATGTGATTGAGGGAAG-CAGAATTTACATGCCTTGCATCTATGTTGTTAATAAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGCCCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCT-GGGAATACCT-GGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAGAAGAAAA-CA-GTGGAAGACTTCTGCAACAGAATCCACAAGGACA-TGGTGAAACA-ATTTAAATATG-CATTGGT-GTGGGG-TT--CTAGCGTG-AAGCATAAGCCTCAGAG-AGTTGGCAAGGAACATG-AGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATTTTGAGAAGCAGTCACTTTTACTGCGTGTTATTT-TGCTAGCTATGATGCCCATAGATGATTGGCTGT-TCCCATGAACGTTTCAATGCA-ATCAAAATGTAGA-CGGACAGATTTTCCTTCTGTCAAGTTAGCCTTGTAATTGTGATCTTTGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGA---AAAAAATGCTAAAAA]

[+] EMBL C97734               [CGCCCACGCGTCCNCCCACTTCTCGAACCTTCTCCGCCTCTCCTCTCTTCCTCCCCACCTCCGTCTCCTCTCTTCCGNACCGGCGAATCCCCAGGCGAGCCTTNTAGAACCTTCGATTGCTCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCANCCGTCATGCAGAAGATCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACANCATCTTNGTCTTCTGAAGGCTAAACTTGCAAAATTACGNCGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU068436             [             aCCCACTTCTCGAACCTTCTCCGCCTCTCCTCTCTTCCTCCCCACCTCCGTCTCCTCTCTTCCGCACCGGCGAATCCCCAGGCGAGCCTTCTAGAACCTTCGATTGCTCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCGACCGTCATGCAGAAGATCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK066361             [                                        TCCTCTCTTCCTCCCCACCTCCGTCTCCTCTCTTCCGCACCGGCGAATCCCCAGGCGAGCCTTCTAGAACCTTCGATTGCTCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCGACCGTCATGCAGAAGATCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTTTCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTACAAAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGAAAGGGTAGAGGAAGGC AGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTTCTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTTGGCATTAGGTTGAACAAGACACCCCCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGCATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATCTGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAG CAGATGATCTCATAGATGTGATTGAGGGAAG CAGAATTTACATGCCTTGCATCTATGTTGTTAATAAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGCCCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCT GGGAATACCT GGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAGAAGAAAA CA GTGGAAGACTTCTGCAACAGAATCCACAAGGACA TGGTGAAACA ATTTAAATATG CATTGGT GTGGGG TT  CTAGCGTG AAGCATAAGCCTCAGAG AGTTGGCAAGGAACATG AGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATTTTGAGAAGCAGTCACTTTTACTGCGTGTTATTT TGCTAGCTATGATGCCCATAGATGATTGGCTGT TCCCATGAACGTTTCAATGCA ATCAAAATGTAGA CGGACAGATTTTCCTTCTGTCAAGTTAGCCTTGTAATTGTGATCTTTGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGA                  ]
[-] EMBL CA923254             [                                                                             CACCGGCGAATCCCCAGGCGAGCCTTCTAGAACCTTCGATTGCTCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCGACCGTCATGCAGAAGTTCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCGCGTGTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAGCATTTTCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU101001             [                                                                                                                                                                 CGTCATGCAGAAGATCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTNTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTTTCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGGGTTATAATGTAC AAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGGAAGGGTAGAGGAAGGCAAGGTTATCAGCACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU101000             [                                                                                                                                                                  GTCATGCAGAAGATCAAGGACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGTCTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGTGGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGTTTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTTTCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTACAAAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGAAAGGGTAGAGGAAGGC AGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTTCTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTTGGCATTAGGTTGAACAAGACACCCCCCAATTTGACATTTAAAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C27815               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGCATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATCTGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAG CAGATGATCTCATAGATGTGATTGAGGGAAG CAGAATTTACATGCCTTGCATCTATGTTGTTAATAAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGCCCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCTGGGGAATACCTGGGATTTGGTTAGGATATACACAAAACCG AAGGTTAAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAG AGGAAA CA GTGGANG CTTCTGCAcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU068435             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTCCCCCTTAGATATGATGCAACAGCCAGATGATCTCATAGATGTGATTGAGGGAAGCCAGAATTTACATGCCTTGCATCTATGTTGTTAATAAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGCCCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCT GGGAATACCT GGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAGAAGAAAA CA GTGGAAGACTTCTGCAACAGAATCCACAAGGACA TGGTGAAACA ATTTAAATATG CATTGGT GTGGGG TT  CTAGCGTG AAGCATAAGCCTCAGAG AGTTGGCAAGGAACATG AGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATTTTGAGAAGCAGTCACTTTTACTGCGTGTTATTT TGCTAGCTATGATGCCCATAGATGATTGGCTGT TCCCATGAACGTTTCAATGCA ATCAAAATGTAGA CGGACAGATTTTCCTTCTGTCAAGTTAGCCTTGTAATTGTGATCTTTGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAaaaaa                  ]
[+] EMBL AU172341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TACNCAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCTGTAATCGTATCCTCTAAGAAGAAAA CA GTGGAAGACTTCTGCAACAGAATCCNCAAGGACA TGGTGAAACA ATTTAAATATG CATTGGT GTGGGG TT  CTAGCGTG AAGCATAAGCCTCAGAG AGTTGGCAAGGAACATG AGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATTTTGAGAAGCAGTCACTTTTACTGCGTGTTATTT TGCTAGCTATGATGCCCATAGATGATTGGCTGT TCCCATGAACGTTTCAATGCA ATCAAAATGTAGA CGGACAGATTTTCCTTCTGTCAAGTTAGCCTTGTAAaaaaaaa                                                                                                                            ]
[+] EMBL BI795401             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCTAAGAAGAAAACCACGTGGAAGACTTCTGCAACAGAATCCACAAGGACACTGGTGAAACACATTTAAATATGCCATTGGT TTGGGGTTT  CTAGCGTGAAAGCATAAGCCTCAGAG AGTTGGCAAGGAACATG AGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCCAACCTGGAAGGAGGTATGAGCTATGAGAATTTTGAGAAGCATTCACTTTTACTGCGTGTTATTT TGCTAGCTATGATGCCCATAGATGATTGGCTGT TCCCATGAACGTTTCAATGCA ATC AAATGTAGA CGGACAGATTTTCCTTCTGTCAAGTTAGCCTTGTAATTGTGATCTTTGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGA   AAAAA          ]
[+] EMBL AU181805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATTTAAATATG CATTGGT GTGGGG TT  CTAGCGTG AAGCATAAGCCTCAGAG AGTTGGCAAGGAACATG AGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATTTTGAGAAGCAGTCACTTTTACTGCGTGTTATTT TGCTAGCTATGATGCCCATAGATGATTGGCTGT TCCCATGAACGTTTCAATGCA ATCAAAATGTAGA CGGACAGATTTTCCTTCTGTCAAGTTAGCCTTGTAATTGTGATCTTTGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGA   TTCACATGCTAAAAA]
[+] EMBL BI807102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    tATTGGTGGTGGGT TTTNCTAGCGTG AAGCATAANCCTCAGAGTAGTTGGCAAGGAACATGTAGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTTTAGGTATATTGTAGTGGTCACGTTCTGCTAACCTGGAAGGAGGTATGAGCTATGAGAATTNTGAGAAGCAGTCACTTTTACTGCGTGTTATTTGTGCTAGCTATGATGCCCATAGATGANTGGCTGTGTCCCATGAACGTTTCAATGCATATCAATATGTAGACCGGACAGA TTTCCCTCTGTCAAGTTA CCTTGTAATTGTGATCTTTGTCGGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGANGCTTTGCTTATCTTCAGAAAGATGAAAGATGATTCAAAAAAaaaa     ]


>consensus_13473#0 CGCCCACGCGTCCNCCCACTTCTCGAACCTTCTCCGCCTCTCCTCTCTTCCTCCCCACCT CCGTCTCCTCTCTTCCGCACCGGCGAATCCCCAGGCGAGCCTTCTAGAACCTTCGATTGC TCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCGACCGTCATGCAGAAGATCAAG GACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGT CTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGT GGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGT TTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTT TCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTAC AAAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGA AAGGGTAGAGGAAGGCAGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTT CTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTT GGCATTAGGTTGAACAAGACACCCCCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGC ATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATC TGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAGCAGAT GATCTCATAGATGTGATTGAGGGAAGCAGAATTTACATGCCTTGCATCTATGTTGTTAAT AAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGC CCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCTGGGAATAC CTGGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCT GTAATCGTATCCTCTAAGAAGAAAACAGTGGAAGACTTCTGCAACAGAATCCACAAGGAC ATGGTGAAACAATTTAAATATGCATTGGTGTGGGGTTCTAGCGTGAAGCATAAGCCTCAG AGAGTTGGCAAGGAACATGAGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTT TAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATT TTGAGAAGCAGTCACTTTTACTGCGTGTTATTTTGCTAGCTATGATGCCCATAGATGATT GGCTGTTCCCATGAACGTTTCAATGCAATCAAAATGTAGACGGACAGATTTTCCTTCTGT CAAGTTAGCCTTGTAATTGTGATCTTTGTCTGATCTTCCTGTTGCTATATATATGGTGAG TCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGAT GAAAGATGAAAAAAATGCTAAAAA



consensusID : consensus_13473#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 248
fasta sequence
                              [GATGGCCCATAGATGGATTGGGCTGTGTCCCACATGGAACGTTTGCAATGCAATGCAAATATGTAGACGGACAAGATGTTGTGCCTTGCTGTGCAAGTTAGCCTTGTATATTGGTGGATGCTTGTGGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGATTCACATGCTAAAAAAAAAA]

[+] EMBL BI796794             [GATGGCCCATAGATGGATTGGGCTGTGTCCCACATGGAACGTTTGCAATGCAATGCAAATATGTAGACGGACAAGATGTTGTGCCTTGCTGTGCAAGTTAGCCTTGTATATTGGTGGATGCTTGTGGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGATTCACATGCTAAAAAAAAAA]


>consensus_13473#1 GATGGCCCATAGATGGATTGGGCTGTGTCCCACATGGAACGTTTGCAATGCAATGCAAAT ATGTAGACGGACAAGATGTTGTGCCTTGCTGTGCAAGTTAGCCTTGTATATTGGTGGATG CTTGTGGTCTGATCTTCCTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTT GAACACATGGAAAGATGCTTTGCTTATCTTCAGAAAGATGAAAGATGATTCACATGCTAA AAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13473#0      CGCCCACGCGTCCNCCCACTTCTCGAACCTTCTCCGCCTCTCCTCTCTTCCTCCCCACCT 60
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      CCGTCTCCTCTCTTCCGCACCGGCGAATCCCCAGGCGAGCCTTCTAGAACCTTCGATTGC 120
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      TCGGGCGGGCCTCCTCCTCCGCGAGCCGCAGCCATGGCGACCGTCATGCAGAAGATCAAG 180
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      GACATCGAGGACGAGATGGCAAGGACGCAGAAGAACAAGGCCACTGCACACCATCTTGGT 240
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      CTTCTGAAGGCTAAACTTGCAAAATTACGCCGTGAGTTGCTGACTCCTACATCCAAAGGT 300
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      GGTGGTGGCGGTGCTGGCGAGGGATTTGATGTGACAAAAAGTGGAGATGCACGTGTTGGT 360
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      TTGGTGGGCTTTCCTTCAGTTGGAAAATCAACATTGTTGAACAAGCTGACAGGAACATTT 420
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      TCAGAGGTTGCAGCCTACGAATTCACAACTTTAACATGTATTCCTGGAGTTATAATGTAC 480
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      AAAGGGGCTAAAATCCAGCTTTTAGATCTTCCAGGAATCATTGAGGGTGCTAAAGATGGA 540
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      AAGGGTAGAGGAAGGCAGGTTATCAGCACAGCAAGGACATGCAATGTCATTCTGATTGTT 600
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      CTTGATGCCATTAAGCCAATAACCCACAAGCGGCTTATTGAGAAGGAGCTTGAGGGATTT 660
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      GGCATTAGGTTGAACAAGACACCCCCCAATTTGACATTTAGAAGAAAGGACAAGGGTGGC 720
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      ATCAATTTTACATCAACTGTGACGAACACAAACTTGGATCTTGAAACAGTAAAAGCAATC 780
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      TGCAGTGAGTACAGGATACACAATGCTGATGTCTCCCTTAGATATGATGCAACAGCAGAT 840
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      GATCTCATAGATGTGATTGAGGGAAGCAGAATTTACATGCCTTGCATCTATGTTGTTAAT 900
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      AAGATTGATCAGATAACACTTGAAGAGCTGGAAATCTTGGATAAACTTCCCCACTACTGC 960
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      CCAATTAGTGCTCATCTTGAGTGGAATCTCGATGGTCTTCTAGAGATGATCTGGGAATAC 1020
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      CTGGATTTGGTTAGGATATACACAAAACCGAAAGGTTTAAACCCAGATTATGAGGACCCT 1080
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      GTAATCGTATCCTCTAAGAAGAAAACAGTGGAAGACTTCTGCAACAGAATCCACAAGGAC 1140
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      ATGGTGAAACAATTTAAATATGCATTGGTGTGGGGTTCTAGCGTGAAGCATAAGCCTCAG 1200
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      AGAGTTGGCAAGGAACATGAGCTTGAGGATGAGGACGTTGTCCAGATCATCAAGAAAGTT 1260
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      TAGGTATATTGTAGTGGTCACGTTCTGCAAACCTGGAAGGAGGTATGAGCTATGAGAATT 1320
consensus_13473#1      ------------------------------------------------------------
                                                                                   

consensus_13473#0      TTGAGAAGCAGTCACTTTTACTGCGTGTTATTTTGCTAGCTATGATG-CCCATAGATGAT 1379
consensus_13473#1      -------------------------------------------GATGGCCCATAGATGGA 17
                                                                  **** **********  

consensus_13473#0      T--GGCTGT-TCCCAT---GAACGTTT-CAATGCAAT-CAAA-ATGTAGACGGACA-GAT 1429
consensus_13473#1      TTGGGCTGTGTCCCACATGGAACGTTTGCAATGCAATGCAAATATGTAGACGGACAAGAT 77
                       *  ****** *****    ******** ********* **** ************* ***

consensus_13473#0      TTT----CCTTCTGT-CAAGTTAGCCTTGTA-ATTG-----TGATCTTTGTCTGATCTTC 1478
consensus_13473#1      GTTGTGCCTTGCTGTGCAAGTTAGCCTTGTATATTGGTGGATGCTTGTGGTCTGATCTTC 137
                        **    * * **** *************** ****     ** *  * ***********

consensus_13473#0      CTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATG 1538
consensus_13473#1      CTGTTGCTATATATATGGTGAGTCACCGATGAACACAGCAGTTGAACACATGGAAAGATG 197
                       ************************************************************

consensus_13473#0      CTTTGCTTATCTTCAGAAAGATGAAAGATGAAAAAAATGCTAAAAA----- 1584
consensus_13473#1      CTTTGCTTATCTTCAGAAAGATGAAAGATGATTCACATGCTAAAAAAAAAA 248
                       *******************************   * **********     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)