These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13477#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1699 fasta sequence [TCCGCCCCCTTCCATCTCCTCTCCCCTATCCAAGAAACCGCTCCCGCCGCCGCAGTCGGCCCGTACCGGCCGGGGAAGATGAAGCTGCTCTACCACCACGCCATCTCCAACGCGCCGTACCTCATGCTGGCCGCGGCCGCCGCGGCCGTGGCGCTGCGGGCGTCGCGGCTGGCCCCCGCCGACGACCTCGCCACGGCGCGGGAGCTGCTGGCGACGAACCTCCCGCTCGCCGTGGCGCTCCTCGCGGCGGCGGTCGTGCTCGCCACCGCCTACCTGATGCGGCGGCCGAGGCCGGTGTACCTGCTCGACTTCGCGTGCTACAAGCCCGGTCCCGAGCACGTGGTGACGAGGGAGACGTTCATGGCGCAGTCGGCGGCGGCCGGCGCGTTCACCGGCGACAGCCTGGCGTTCCAGCGGAAGATCCTGGAGCGGTCGGGGCTCGGGCAGGGGACCTACTTCCCGGCGGCGGTGCTCAACTCGCCGCCGAACCCGTGCATGGCGGAGGCGCGGCGGGAGGCGGAGCAGGTGATGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC-AACCACTACAAGCTCCGCGGGAACGTCGCCACC-TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCCAACTGCCTCTTCCGGATGGGCGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCG-CCGCCGCGCCAAGTACCAGCTGCTGCACACGGTGCGCACCCACAGCGGCGCCGCCGACCGCGCCTACCGCTGCGTGTTCCAGGAGGAGGACGACGCCGCCGGCGTCGGCGTCGCGCTCTCCAAGGACCTCATGGCCGTCGCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTTCTGCATCCACGCCGGCGGCCGCGCCGTGCTCGACACCATCGAGAAGAACCTCGGCCTCGGCGCCTGGCACATGGAGCCGTCGCGGATGACGCTCTACCGGTGGGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCGTACGCCGAGGCCAAGGGCCGCGTCCGCCGCGGACAGACGGCGTGGCAGATCGCGTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGGGCGCTCCGCACCGTCGAGCCCGACGCCGACGAGCGCAACCCGTGGGCGGGGGAGATCGACAGCTTCCCCGTCGAGGTGCCCAAGGTGGAGGCCGTCGCCACCGCCACCGCCGACGCCGCTTTTTCGTGAGATCGCCCCCCCCGGCGATGGCGACGAGGATGATGGTGGTTTTTGCAGCCTCGGTTGTTTCACTTGTTTTTCTTAGTTTCTTTCTGGTTTTTTTCTTTCCTTTTTTTTTGGGGTTTTGAAGTATATACCATCAAAT] [+] EMBL CB650693 [TCCGCCCCCTTCCATCTCCTCTCCCCTATCCAAGAAACCGCTCCCGCCGCCGCAGTCGGCCCGTACCGGCCGGGGAAGATGAAGCTGCTCTACCACCACGCCATCTCCAACGCGCCGTACCTCATGCTGGCCGCGGCCGCCGCGGCCGTGGCGCTGCGGGCGTCGCGGCTGGCCCCCGCCGACGACCTCGCCACGGCGCGGGAGCTGCTGGCGACGAACCTCCCGCTCGCCGTGGCGCTCCTCGCGGCGGCGGTCGTGCTCGCCACCGCCTACCTGATGCGGCGGCCGAGGCCGGTGTACCTGCTCGACTTCGCGTGCTACAAGCCCGGTCCCGAGCACGTGGTGACGAGGGAGACGTTCATGGCGCAGTCGGCGGCGGCCGGCGCGTTCACCGGCGACAGCCTGGCGTTCCAGCGGAAGATCCTGGAGCGGTCGGGGCTCGGGCAGGGGACCTACTTCCCGGCGGCGGTGCTCAACTCGCCGCCGAACCCGTGCATGGCGGAGGCGCGGCGGGAGGCGGAGCAGGTGATGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGTCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGC ] [+] EMBL CB652820 [ CCGCCGCGTTCCATCTCCTCTCCCCTATCCAAGAAACCGCTCCCGCCGCCGCAGTCGGCCCGTACCGGCCGGGGAAGATGAAGCTGCTCTACCACCACGCCATCTCCAACGCGCCGTACCTCATGCTGGCCGCGGCCGCCGCGGCCGTGGCGCTGCGGGCGTCGCGGCTGGCCCCCGCCGACGACCTCGCCACGGCGCGGGAGCTGCTGGCGACGAACCTCCCGCTCGCCGTGGCGCTCCTCGCGGCGGCGGTCGTGCTCGCCACCGCCTACCTGATGCGGCGGCCGAGGCCGGTGTACCTGCTCGACTTCGCGTGCTACAAGCCCGGTCCCGAGCACGTGGTGACGAGGGAGACGTTCATGGCGCAGTCGGCGGCGGCCGGCGCGTTCACCGGCGACAGCCTGGCGTTCCAGCGGAAGATCCTGGAGCGGTCGGGGCTCGGGCAGGGGACCTACTTCCCGGCGGCGGTGCTCAACTCGCCGCCGAACCCGTGCATGGCGGAGGCGCGGCGGGAGGCGGAGCAGGTGATGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGTCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGGCACAACCGCTC ] [+] EMBL CB685302 [ CTCCCCCACCACGCCATCTCCAACGCGCCGTACCTCATGCTGGCCGCGGCCGCCGCGGCCGTGGCGCTGCGGGCGTCGCGGCTGGCCCCCGCCGACGACCTCGCCACGGCGCGGGAGCTGCTGGCGACGAACCTCCCGCTCGCCGTGGCGCTCCTCGCGGCGGCGGTCGTGCTCGCCACCGCCTACCTGATGCGGCGGCCGAGGCCGGTGTACCTGCTCGACTTCGCGTGCTACAAGCCCGGTCCCGAGCACGTGGTGACGAGGGAGACGTTCATGGCGCAGTCGGCGGCGGCCGGCGCGTTCACCGGCGACAGCCTGGCGTTCCAGCGGAAGATCCTGGAGCGGTCGGGGCTCGGGCAGGGGACCTACTTCCCGGCGGCGGTGCTCAACTCGCCGCCGAACCCGTGCATGGCGGAGGCGCGGCGGGAGGCGGAGCAGGTGATGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGCCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCCCATCCTCATTGACCTCCCCAAGCAGCTGC ] [+] EMBL AK120567 [ accaCCACCGCCTACCTGATGCGGCGGCCGAGGCCGGTGTACCTGCTCGACTTCGCGTGCTACAAGCCCGGTCCCGAGCACGTGGTGACGAGGGAGACGTTCATGGCGCAGTCGGCGGCGGCCGGCGCGTTCACCGGCGACAGCCTGGCGTTCCAGCGGAAGATCCTGGAGCGGTCGGGGCTCGGGCAGGGGACCTACTTCCCGGCGGCGGTGCTCAACTCGCCGCCGAACCCGTGCATGGCGGAGGCGCGGCGGGAGGCGGAGCAGGTGATGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGTCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCCAACTGCCTCTTCCGGATGGGCGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCG CCGCCGCGCCAAGTACCAGCTGCTGCACACGGTGCGCACCCACAGCGGCGCCGCCGACCGCGCCTACCGCTGCGTGTTCCAGGAGGAGGACGACGCCGCCGGCGTCGGCGTCGCGCTCTCCAAGGACCTCATGGCCGTCGCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTTCTGCATCCACGCCGGCGGCCGCGCCGTGCTCGACACCATCGAGAAGAACCTCGGCCTCGGCGCCTGGCACATGGAGCCGTCGCGGATGACGCTCTACCGGTGGGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCGTACGCCGAGGCCAAGGGCCGCGTCCGCCGCGGACAGACGGCGTGGCAGATCGCGTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGGGCGCTCCGCACCGTCGAGCCCGACGCCGACGAGCGCAACCCGTGGGCGGGGGAGATCGACAGCTTCCCCGTCGAGGTGCCCAAGGTGGAGGCCGTCGCCACCGCCACCGCCGACGCCG ] [+] EMBL CB679995 [ GGTGACCATGGAGACGTTCATGGCGCAGTCGGCGGCGGCCGGCGCGTTCACCGGCGACAGCCTGGCGTTCCAGCGGAAGATCCTGGAGCGGTCGGGGCTCGGGCAGGGGACCTACTTCCCGGCGGCGGTGCTCAACTCGCCGCCGAACCCGTGCATGGCGGAGGCGCGGCGGGAGGCGGAGCAGGTGATGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGTCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCCAACTGCCTCTTCCGGATGGGCGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCG CCGCCGCGCCAAGTACCAGCTGCTGCACACGGTGCGCACCCACAGCGGCGCCGCCGACCGCGCCTACC ] [-] EMBL CB964586 [ TGTTCGGCGCCATCGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGTCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCGAACTGCCTCTTCCGGATGGGTGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCG CCGCCGCGCCAAGTACCAGCTGCTGCACACGGTGCGCACCCACAGCGGCGCCGCCGACCGCGCCTACCGCTGCGTGTTCCAGGAGGAGGACGACGCCGCCGGCGTCGGCGTCGCGCTCTCCAAGGACCTCATGGCCGTCGCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTTCTG ] [-] EMBL CB966301 [ TTC GCG CATCAACCCCGTGCTGGCAAAGACCGG GTCCGGGCCAGGGACATCGGCTTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCATTGATCGTCAAACCACTACAAGCTCCGCGGAAACGTCGCCACCTTACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCGAACTGCCTCTTCCGGATGGGTGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCG CCGCCGCGCCAAGTACCAGCTGCTGCACACGGTGCGCACCCACAGCGGCGCCGCCGACCGCGCCTACCGCTGCGTGTTCCAGGAGGAGGACGACGCCGCCGGCGTCGGCGTCGCGCTCTCCAAGGACCTCATGGCCGTCGCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTT ] [-] EMBL BI306700 [ CGACGCCGTGCTGGCAAAGACCGGCGTCCGGGCCAGGGACATCGGCGTCGTCGTCGTCAACTGCAGCCTCTTCAACCCGACACCGTCGCTGTCCGCCATGATCGTC AACCACTACAAGCTCCGCGGGAACGTCGCCACC TACAACCTCGGCGGCATGGGCTGCAGCGCCGGCCTCATCTCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCGAACTGCCTCTTCCGGATGGGTGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCGCCCGCCGCGCCAAG ACCAGCTGCTGCACACGGTGCGCACCCACAGCGGCGCCGCCGACCGCGCCTACCGCTGCGTGTTCCAGGAGGAGGACGACGCCGCCGGCGTCGGCGTCGCGCTCTCCAAGGACCTCATGGCCGTCGCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTTCTGCA ] [+] EMBL CB652029 [ TCCATTGACCTCGCCAAGCAGCTGCTCCAGGTTCACCGGAACTCGTACGCGTTGGTGGTGAGCATGGAGAACATCACGCTCAACTGGTACTGGGGCAACAACCGCTCCATGCTCGTCTCCAACTGCCTCTTCCGGATGGGCGGCGCCGCCATCCTCCTCAGCAACCGCGGCGGCGACCG CCGCCGCGCCAAGTACCAGCTGTTGCTCACCGAGCGCACCCACAGCGGCGCCTCCGACCGCGCCTACCGCTGCGTGTTCCA ] [-] EMBL CB652030 [ TGGCCGTCGCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTTCTGCATCCACGCCGGCGGCCGCGCCGTGCTCGACACCATCGAGAAGAACCTCGGCCTCGGCGCCTGGCACATGGAGCCGTCGCGGATGACGCTCTACCGGTGGGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCGTACGCCGAGGCCAAGGGCCGCGTCCGCCGCGGACAGACGGCGTGGCAGATCGCGTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGGGCGCTCCGCACCGTCGAGCCCGACGCCGACGAGCGCAACCCGTGGGCGGGGGAGATCGACAGCTTCCCCGTCGAGGTGCCCAAGGTGGAGGCCGTCGCCACCGCCACCGCCGACGCCGC ] [-] EMBL CB679996 [ GCCGGCGAGGCCCTCCGCACCAACATCACCACCCTGGGGCCCCTCGTCCTCCCCATGTCCGAGCAGATCCTGTTCCTGGCGTCGCTCGTGGCGCGCCGCGTGTTCGGCCTCGCCGGCGTGAGGCCCTACATCCCGGACTTCAAGATGGCGTTCGACCACTTCTGCATCCACGCCGGCGGCCGCGCCGTGCTCGACACCATCGAGAAGAACCTCGGCCTCGGCGCCTGGCACATGGAGCCGTCGCGGATGACGCTCTACCGGTGGGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCGTACGCCGAGGCCAAGGGCCGCGTCCGCCGCGGACAGACGGCGTGGCAGATCGCGTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGGGCGCTCCGCACCGTCGAGCCCGACGCCGACGAGCGCAACCCGTGGGCGGGGGAGATCGACAGCTTCCCCGTCGAGGTGCCCAAGGTGGAGGCCGTCGCCACCGCCACCGCCGACGCCGC ] [-] EMBL AU174129 [ CACCATCGAGAAGAACCTCGGCCTCGGCGCCTGGCACATGGAGCCGTCGCGGATGACGCTCTACCGGTGGGGCAACACGTCGAGCAGCTCGCTCTGGTACGAGCTCGCGTACGCCGAGGCCAAGGGCCGCGTCCGCCGCGGACAGACGGCGTGGCAGATCGCGTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGGGCGCTCCGCACCGTCGAGCCCGACGCCGACGAGCGCAACCCGTGGGCGGGGGAGATCGACAGCTTCCCCGTCGAGGTGCCCAAGGTGGAGGCCGTCGCCACCGCCACCGCCGACGCCGC ] [-] EMBL CB685303 [ ACACGTCGAGCAGCTCGTTTTGGTACGAGCTCGCGTACGCCGAGGCCAAGGGCCGCGTCCCCCGCGGACAGACGGCGTGGCAGATCGCGTTCGGCTCCGGGTTCAAGTGCAACAGCGCCGTGTGGAGGGCGCTCCGCCCCGTCGAGCCCGACGCCGAGGAGCGCAACCCGTGGGCGGGGGAGATCGACAGTTTCCCCGTCGAGGTGCCCAAGGTGGAGGCCGTCGCCACCCCCACCGCGGTCCCCGATTTTTCGTGAGATCGCCCCCCCCGGCGATGGCGACGAGGATGATGGTGGTTTTTGCAGCCTCGGTTGTTTCACTTGTTTTTCTTAGTTTCTTTCTGGTTTTTTTCTTTCCTTTTTTTTTGGGGTTTTGAAGTATATACCATCAAAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||