These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13483#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1679 fasta sequence [GAGGAGACGAATCGTTGGAGAAGCGAAGCGACGCTACTCGACCCAGCGTCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGATCAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA-CTAGACTGAAGGC-TTGCCTTT-ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC-TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA-GGGAC-TGAA-GAAATGGC-AGCCAAATC-AAAGGCTAGCAATAGCATCTTGTGTT-GTTTTTGTTTTCCTTTTCTTTTTTGTTTT-CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT-AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTTTGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTGTACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACTGTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGATGATTGTCTCTGTTTAAAAAA] [+] EMBL CF278564 [GAGGAGACGAATCGTTGGAGAAGCGAAGCGACGCTACTCGACCCAGCGTCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTCAGTCCCAGATCAACTGAGTAAGATAT ] [+] EMBL CB621447 [ CGCTACTCGACCCAGCGTCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGATCAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTTTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGAC ] [+] EMBL AK063435 [ TCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGATCAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA CTAGACTGAAGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTT GTTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTTTGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTGTACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACTGTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGATGATTGTCTC ] [+] EMBL CF306807 [ ttttgaACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA CTAGACTGAAGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAG ] [+] EMBL CF308313 [ AACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA CTAGACTGAAGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTTGGNTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAAATTTGTCTGTTTGT ] [+] EMBL BI810430 [ GAGTACAAGCATCTAGACTGAAGGCGTTGCCTTTGACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTT GCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTACATGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTATT GTTTTTGTTTTCCTTTTCTTTTTTGTTTTCCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT AAATTTGTCTGTTTGTTAaaaaa ] [+] EMBL AU064280 [ AGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGGACTTGAAGGAAATGGCAAGCCAAATCAAAAGGC ] [-] EMBL CF308314 [ TACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTT GTTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAaaaaaaaa ] [-] EMBL CF278565 [ C TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTT GTTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATACCATTTGCTGTAT AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTTTGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTGTACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACTGTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGATGATTGTCTCTGTTTAAAAAA] consensusID : consensus_13483#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence [TCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGGTATATATTAATTCTTACAACCTTATATGTTTAGAACATGCAATAGGTTGATTTTCATAACCAATATAAGTACAAACTCAATCATGTTCACAAGAAGTCATGTTTTCCATTTCCAGTAACGTTTAAGGAATTTGTTTAACCAGTACCTCAGTGAATGTGCCTTTTACCTTTTACTCCTTGCTATATGTTCCTCTGAATGAGCTAATGTCTTGGTGGTTTTAAGTTTTCACTTTTGAGTAATGTATATATGATCTCAAAAGGAAAGATAA] [+] EMBL CF306511 [TCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGGTATATATTAATTCTTACAACCTTATATGTTTAGAACATGCAATAGGTTGATTTTCATAACCAATATAAGTACAAACTCAATCATGTTCACAAGAAGTCATGTTTTCCATTTCCAGTAACGTTTAAGGAATTTGTTTAACCAGTACCTCAGTGAATGTGCCTTTTACCTTTTACTCCTTGCTATATGTTCCTCTGAATGAGCTAATGTCTTGGTGGTTTTAAGTTTTCACTTTTGAGTAATGTATATATGATCTCAAAAGGAAAGATAA] consensusID : consensus_13483#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [TGCCTTTACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTACTGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTANNNNNNNNNNNNNNNNN] [+] EMBL CA753958 [TGCCTTTACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTACTGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTANNNNNNNNNNNNNNNNN] consensusID : consensus_13483#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 403 fasta sequence [TAAGGGCATTGCAAGCCTGGAATACCACTGGGATTCTGCTTTTTTCCTGTTGGCCGATANCCAAGGCATGTGATAAGCCTGNTCTTTNCGGCTTCTCTATCCGTGGTAACTGGCCTTCCTCTTGGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTAAAAAAAAAAAAAA] [+] EMBL AU082983 [TAAGGGCATTGCAAGCCTGGAATACCACTGGGATTCTGCTTTTTTCCTGTTGGCCGATANCCAAGGCATGTGATAAGCCTGNTCTTTNCGGCTTCTCTATCCGTGGTAACTGGCCTTCCTCTTGGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTAAAAAAAAAAAAAA] consensusID : consensus_13483#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 196 fasta sequence [TTTTTGTTTTCCTCTTTCTTTGTTTTTTGTTTTCACAGGGTTAAGCCTGGTAGCTCTTATGTTTGTTCCAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTACCCGGGGGATGGAGTGAGAAAAAAAAAAGTAATCCCAGAGAAAAGAAAGGGAAGCCTCCCAATTTCATCAGACTTTTCAGATA] [+] EMBL BI807111 [TTTTTGTTTTCCTCTTTCTTTGTTTTTTGTTTTCACAGGGTTAAGCCTGGTAGCTCTTATGTTTGTTCCAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTACCCGGGGGATGGAGTGAGAAAAAAAAAAGTAATCCCAGAGAAAAGAAAGGGAAGCCTCCCAATTTCATCAGACTTTTCAGATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 GAGGAGACGAATCGTTGGAGAAGCGAAGCGACGCTACTCGACCCAGCGTCCACGGCGAGC 60 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 GCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAG 120 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 GCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGT 180 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGA 240 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 GATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACC 300 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGG 360 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCA 420 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGA 480 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 TACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAAT 540 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 ACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGAT 600 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTT 660 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 ATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTT 720 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAG 780 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTT 840 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ---------------------------------------------TGCCTTTACAGCTTC 15 consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 CAAGGATTGGAATTGAGGATGAGTACAAGCACTAGACTGAAGGCTTGCCTTTACAGCTTC 900 consensus_13483#1 ---------------------------------------------TCAACTCCAATTCGC 15 consensus_13483#2 ACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATAC- 74 consensus_13483#3 -------------------------------TAAGGGCATTGCA---AGCCTGGAATACC 26 consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 ACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATAC- 959 consensus_13483#1 AACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCG 75 consensus_13483#2 ACTGGA--TCTGCTTTTT-CCTGTTGGCCGATATCCAAGG--CATGTGATAAGCCTGTTC 129 consensus_13483#3 ACTGGGATTCTGCTTTTTTCCTGTTGGCCGATANCCAAGG--CATGTGATAAGCCTGNTC 84 consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 ACTGGA--TCTGCTTTTT-CCTGTTGGCCGATATCCAAGG--CATGTGATAAGCCTGTTC 1014 consensus_13483#1 CTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAG 135 consensus_13483#2 TTTC-GGCTTCTCTATCCGTGGTA--CTGGCCTTCCTCTTG-CTGGA--ACTTTATTATG 183 consensus_13483#3 TTTNCGGCTTCTCTATCCGTGGTAA-CTGGCCTTCCTCTTGGCTGGA--ACTTTATTATG 141 consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 TTTC-GGCTTCTCTATCCGTGGTA--CTGGCCTTCCTCTTG-CTGGA--ACTTTATTATG 1068 consensus_13483#1 ATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTG 195 consensus_13483#2 ACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAAC 243 consensus_13483#3 ACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAAC 201 consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 ACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAAC 1128 consensus_13483#1 GGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATAT 255 consensus_13483#2 ATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAA 303 consensus_13483#3 ATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAA 261 consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 ATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAA 1188 consensus_13483#1 TTGC-ACTTCTTTTCCACAGATGGGTATATATTAATTCTTACAACCTTATATGTTTAGAA 314 consensus_13483#2 GGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCA-AGG-- 360 consensus_13483#3 GGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCA-AGG-- 318 consensus_13483#4 ------------------TTTTTGTTTTCCTCTTTCTTTG-TTTTTTGTTTTCACAGG-- 39 consensus_13483#0 GGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCA-AGG-- 1245 consensus_13483#1 CATGCAATAGGTTGATTTTCATAACCAATATAAGTACAAACTCAATCATGTTCACAAGAA 374 * * * * * **** * * consensus_13483#2 GT--AGCCTGGTAGCTC---TTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCT 415 consensus_13483#3 GT--AGCCTGGTAGCTC---TTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCT 373 consensus_13483#4 GTTAAGCCTGGTAGCTC---TTATGTTTGTTCCAATAACATTTGCTGTATAAATTTGTCT 96 consensus_13483#0 GT--AGCCTGGTAGCTC---TTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCT 1300 consensus_13483#1 GTCATGTTTTCCATTTCCAGTAACGTTTAAGGAATTTGTTTAACCAGTACCTCAGTGAAT 434 ** * * * ** * * **** * * * * *** ** * consensus_13483#2 GTTTGTTATGCTGTTTANNNNNNNNNNNNNNNNN-------------------------- 449 consensus_13483#3 GTTTGTTATGCTGTTTAAAAAAAAAAAAAA------------------------------ 403 consensus_13483#4 GTTTGTTATGCTGTTTACCCGGGGGATGGAGTGAGAAAAAAAAAAGTAATCCCAGAGAAA 156 consensus_13483#0 GTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAA-GTAATGCAAGAGAAA 1359 consensus_13483#1 GTGCCTTTTACCTTTTACTCCTTGCTATATGTTCCTCTGAATGAGCTAATGTCTTGGTGG 494 ** ** * * **** consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 AGAAAGGGAAGCCTCCCAATTTCATCAGACTTTTCAGATA-------------------- 196 consensus_13483#0 AGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGAT 1419 consensus_13483#1 TTTTAAGTTTTCACTTTTGAGTAATGTATATATGATCTCAAAAGGAAAGATAA------- 547 consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 TTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTT 1479 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 TGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTG 1539 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 TACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACT 1599 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 ------------------------------------------------------------ consensus_13483#3 ------------------------------------------------------------ consensus_13483#4 ------------------------------------------------------------ consensus_13483#0 GTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGAT 1659 consensus_13483#1 ------------------------------------------------------------ consensus_13483#2 -------------------- consensus_13483#3 -------------------- consensus_13483#4 -------------------- consensus_13483#0 GATTGTCTCTGTTTAAAAAA 1679 consensus_13483#1 -------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||