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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13483#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1679 fasta sequence
[GAGGAGACGAATCGTTGGAGAAGCGAAGCGACGCTACTCGACCCAGCGTCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGATCAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA-CTAGACTGAAGGC-TTGCCTTT-ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC-TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA-GGGAC-TGAA-GAAATGGC-AGCCAAATC-AAAGGCTAGCAATAGCATCTTGTGTT-GTTTTTGTTTTCCTTTTCTTTTTTGTTTT-CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT-AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTTTGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTGTACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACTGTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGATGATTGTCTCTGTTTAAAAAA]
[+] EMBL CF278564 [GAGGAGACGAATCGTTGGAGAAGCGAAGCGACGCTACTCGACCCAGCGTCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTCAGTCCCAGATCAACTGAGTAAGATAT ]
[+] EMBL CB621447 [ CGCTACTCGACCCAGCGTCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGATCAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTTTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGAC ]
[+] EMBL AK063435 [ TCCACGGCGAGCGCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAGGCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGATACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAATACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGATCAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA CTAGACTGAAGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTT GTTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTTTGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTGTACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACTGTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGATGATTGTCTC ]
[+] EMBL CF306807 [ ttttgaACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTTATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTTCCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAGCTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA CTAGACTGAAGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAG ]
[+] EMBL CF308313 [ AACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTTCAAGGATTGGAATTGAGGATGAGTACAAGCA CTAGACTGAAGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTTGGNTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAAATTTGTCTGTTTGT ]
[+] EMBL BI810430 [ GAGTACAAGCATCTAGACTGAAGGCGTTGCCTTTGACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTT GCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTACATGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTATT GTTTTTGTTTTCCTTTTCTTTTTTGTTTTCCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT AAATTTGTCTGTTTGTTAaaaaa ]
[+] EMBL AU064280 [ AGGC TTGCCTTT ACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGGACTTGAAGGAAATGGCAAGCCAAATCAAAAGGC ]
[-] EMBL CF308314 [ TACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTAC TGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATA GGGAC TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTT GTTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTAT AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAaaaaaaaa ]
[-] EMBL CF278565 [ C TGAA GAAATGGC AGCCAAATC AAAGGCTAGCAATAGCATCTTGTGTT GTTTTTGTTTTCCTTTTCTTTTTTGTTTT CAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATACCATTTGCTGTAT AAATTTGTCTGTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAAGTAATGCAAGAGAAAAGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGATTTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTTTGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTGTACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACTGTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGATGATTGTCTCTGTTTAAAAAA]
consensusID : consensus_13483#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence
[TCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGGTATATATTAATTCTTACAACCTTATATGTTTAGAACATGCAATAGGTTGATTTTCATAACCAATATAAGTACAAACTCAATCATGTTCACAAGAAGTCATGTTTTCCATTTCCAGTAACGTTTAAGGAATTTGTTTAACCAGTACCTCAGTGAATGTGCCTTTTACCTTTTACTCCTTGCTATATGTTCCTCTGAATGAGCTAATGTCTTGGTGGTTTTAAGTTTTCACTTTTGAGTAATGTATATATGATCTCAAAAGGAAAGATAA]
[+] EMBL CF306511 [TCAACTCCAATTCGCAACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCACTTCTTTTCCACAGATGGGTATATATTAATTCTTACAACCTTATATGTTTAGAACATGCAATAGGTTGATTTTCATAACCAATATAAGTACAAACTCAATCATGTTCACAAGAAGTCATGTTTTCCATTTCCAGTAACGTTTAAGGAATTTGTTTAACCAGTACCTCAGTGAATGTGCCTTTTACCTTTTACTCCTTGCTATATGTTCCTCTGAATGAGCTAATGTCTTGGTGGTTTTAAGTTTTCACTTTTGAGTAATGTATATATGATCTCAAAAGGAAAGATAA]
consensusID : consensus_13483#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence
[TGCCTTTACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTACTGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTANNNNNNNNNNNNNNNNN]
[+] EMBL CA753958 [TGCCTTTACAGCTTCACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATACACTGGATCTGCTTTTTCCTGTTGGCCGATATCCAAGGCATGTGATAAGCCTGTTCTTTCGGCTTCTCTATCCGTGGTACTGGCCTTCCTCTTGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTANNNNNNNNNNNNNNNNN]
consensusID : consensus_13483#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 403 fasta sequence
[TAAGGGCATTGCAAGCCTGGAATACCACTGGGATTCTGCTTTTTTCCTGTTGGCCGATANCCAAGGCATGTGATAAGCCTGNTCTTTNCGGCTTCTCTATCCGTGGTAACTGGCCTTCCTCTTGGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTAAAAAAAAAAAAAA]
[+] EMBL AU082983 [TAAGGGCATTGCAAGCCTGGAATACCACTGGGATTCTGCTTTTTTCCTGTTGGCCGATANCCAAGGCATGTGATAAGCCTGNTCTTTNCGGCTTCTCTATCCGTGGTAACTGGCCTTCCTCTTGGCTGGAACTTTATTATGACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAACATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAAGGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCAAGGGTAGCCTGGTAGCTCTTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTAAAAAAAAAAAAAA]
consensusID : consensus_13483#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 196 fasta sequence
[TTTTTGTTTTCCTCTTTCTTTGTTTTTTGTTTTCACAGGGTTAAGCCTGGTAGCTCTTATGTTTGTTCCAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTACCCGGGGGATGGAGTGAGAAAAAAAAAAGTAATCCCAGAGAAAAGAAAGGGAAGCCTCCCAATTTCATCAGACTTTTCAGATA]
[+] EMBL BI807111 [TTTTTGTTTTCCTCTTTCTTTGTTTTTTGTTTTCACAGGGTTAAGCCTGGTAGCTCTTATGTTTGTTCCAATAACATTTGCTGTATAAATTTGTCTGTTTGTTATGCTGTTTACCCGGGGGATGGAGTGAGAAAAAAAAAAGTAATCCCAGAGAAAAGAAAGGGAAGCCTCCCAATTTCATCAGACTTTTCAGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 GAGGAGACGAATCGTTGGAGAAGCGAAGCGACGCTACTCGACCCAGCGTCCACGGCGAGC 60
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 GCCCCCCGCCGGCGACGGCGACGGCGAGAGATGCGGGCCCGAGCCGCCGACCACCTCGAG 120
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 GCGCTCTCCCTGGAGATCGAGCGCAAGCTGCAGAAGGCTCTCAACTCCAATTCGCAACGT 180
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCGCTCGA 240
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 GATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAGATACC 300
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTGGGAGG 360
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATATTTGCA 420
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CTTCTTTTCCACAGATGGTTATTCGAAGTCCCTCTTGATGGGAAGGAAGTATCACTGAGA 480
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 TACAGCTCTGCTCTTGTCCAAGGAGCTACTAATGTTTTTTGGATTGACATCCAAACCAAT 540
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 ACAAGACACTTTCTCTCATTATATAATTATCTCCTTGAAGAGGTTGCTTTAGTCCCAGAT 600
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CAACTGAGTAAGATATCAGTACAGGCTGGTAGAGGTCTTTTCCTCCTCCTCTCGAGATTT 660
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 ATGCTGTTCTATGATCAAGATCACTTGCTTGCAAGTTTCCTTGAGCATTTTCCTACTTTT 720
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CCAAATTCTTTCTTGGTTGGTGGCCCTGCAGATTACTATGTAATTGAACTCACTGATCAG 780
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CTCCAGAAACTAAAAGTTGAACCTGTGCTTCTGCATTACCTCTCCCGCTTGACCATCCTT 840
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ---------------------------------------------TGCCTTTACAGCTTC 15
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 CAAGGATTGGAATTGAGGATGAGTACAAGCACTAGACTGAAGGCTTGCCTTTACAGCTTC 900
consensus_13483#1 ---------------------------------------------TCAACTCCAATTCGC 15
consensus_13483#2 ACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATAC- 74
consensus_13483#3 -------------------------------TAAGGGCATTGCA---AGCCTGGAATACC 26
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 ACTTCTCCTGGAGGTCCTACCTACCCTACACGAGCAGTAAGGCATGCAGCCTGGAATAC- 959
consensus_13483#1 AACGTCTTCAGCTGCTGCAGCAGTTGTTTGCTGACATCGCATTGAAGGTGGATGACCGCG 75
consensus_13483#2 ACTGGA--TCTGCTTTTT-CCTGTTGGCCGATATCCAAGG--CATGTGATAAGCCTGTTC 129
consensus_13483#3 ACTGGGATTCTGCTTTTTTCCTGTTGGCCGATANCCAAGG--CATGTGATAAGCCTGNTC 84
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 ACTGGA--TCTGCTTTTT-CCTGTTGGCCGATATCCAAGG--CATGTGATAAGCCTGTTC 1014
consensus_13483#1 CTCGAGATGTGATTTTAAGCACGAACGATGATGGTATTGCTCCAGTAGATGAGCGAGAAG 135
consensus_13483#2 TTTC-GGCTTCTCTATCCGTGGTA--CTGGCCTTCCTCTTG-CTGGA--ACTTTATTATG 183
consensus_13483#3 TTTNCGGCTTCTCTATCCGTGGTAA-CTGGCCTTCCTCTTGGCTGGA--ACTTTATTATG 141
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 TTTC-GGCTTCTCTATCCGTGGTA--CTGGCCTTCCTCTTG-CTGGA--ACTTTATTATG 1068
consensus_13483#1 ATACCCGGTTGTGCTTCTATGAGATTCTTGCTAACCATTTTGTTAAAGTACCTGAAAGTG 195
consensus_13483#2 ACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAAC 243
consensus_13483#3 ACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAAC 201
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 ACTTGCGTCAAGACTGTCTACTACTACATCCTCAACCTAATTGTCTCAAGCTGGGAGAAC 1128
consensus_13483#1 GGAGGCGTATACTTGACTTGATAGTGCAACTCTGGAGCCAGTCTTTTGCAGCGAACATAT 255
consensus_13483#2 ATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAA 303
consensus_13483#3 ATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAA 261
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 ATGAGACGGCCCAACCACCAAAGGATGCATAGGGACTGAAGAAATGGCAGCCAAATCAAA 1188
consensus_13483#1 TTGC-ACTTCTTTTCCACAGATGGGTATATATTAATTCTTACAACCTTATATGTTTAGAA 314
consensus_13483#2 GGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCA-AGG-- 360
consensus_13483#3 GGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCA-AGG-- 318
consensus_13483#4 ------------------TTTTTGTTTTCCTCTTTCTTTG-TTTTTTGTTTTCACAGG-- 39
consensus_13483#0 GGCTAGCAATAGCATCTTGTGTTGTTTTTGTTTTCCTTTTCTTTTTTGTTTTCA-AGG-- 1245
consensus_13483#1 CATGCAATAGGTTGATTTTCATAACCAATATAAGTACAAACTCAATCATGTTCACAAGAA 374
* * * * * **** * *
consensus_13483#2 GT--AGCCTGGTAGCTC---TTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCT 415
consensus_13483#3 GT--AGCCTGGTAGCTC---TTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCT 373
consensus_13483#4 GTTAAGCCTGGTAGCTC---TTATGTTTGTTCCAATAACATTTGCTGTATAAATTTGTCT 96
consensus_13483#0 GT--AGCCTGGTAGCTC---TTATGTTTGTTCAAATAACATTTGCTGTATAAATTTGTCT 1300
consensus_13483#1 GTCATGTTTTCCATTTCCAGTAACGTTTAAGGAATTTGTTTAACCAGTACCTCAGTGAAT 434
** * * * ** * * **** * * * * *** ** *
consensus_13483#2 GTTTGTTATGCTGTTTANNNNNNNNNNNNNNNNN-------------------------- 449
consensus_13483#3 GTTTGTTATGCTGTTTAAAAAAAAAAAAAA------------------------------ 403
consensus_13483#4 GTTTGTTATGCTGTTTACCCGGGGGATGGAGTGAGAAAAAAAAAAGTAATCCCAGAGAAA 156
consensus_13483#0 GTTTGTTATGCTGTTTACACGGGGGATGGAGTGAGAAAAAAAAA-GTAATGCAAGAGAAA 1359
consensus_13483#1 GTGCCTTTTACCTTTTACTCCTTGCTATATGTTCCTCTGAATGAGCTAATGTCTTGGTGG 494
** ** * * ****
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 AGAAAGGGAAGCCTCCCAATTTCATCAGACTTTTCAGATA-------------------- 196
consensus_13483#0 AGAAAGGGAAGCCTGCAAATTTCATCAGACTTTTCAGATAGGAAATTACATTGTTCAGAT 1419
consensus_13483#1 TTTTAAGTTTTCACTTTTGAGTAATGTATATATGATCTCAAAAGGAAAGATAA------- 547
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 TTAGTATATGTCAATAATCAATGGCCGAGATTTTAGGAAGAGTCTCCATAGAGTCCCTTT 1479
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 TGCAATGCAGTGCATGGTCTGTTGAGGTAGTTGAGCAGCAAATGGCTAATGTGCAGTTTG 1539
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 TACCTTGTGTTGTAATACAACTAAGGGTCCAGGCAATGAATTGCTTAGGACCTCTGCACT 1599
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 ------------------------------------------------------------
consensus_13483#3 ------------------------------------------------------------
consensus_13483#4 ------------------------------------------------------------
consensus_13483#0 GTAGCTGCCATGAGCAAGAGTGAACTGTTTATCTGTAGTCTGTACTGCACATAAATAGAT 1659
consensus_13483#1 ------------------------------------------------------------
consensus_13483#2 --------------------
consensus_13483#3 --------------------
consensus_13483#4 --------------------
consensus_13483#0 GATTGTCTCTGTTTAAAAAA 1679
consensus_13483#1 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||