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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13500#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2372 fasta sequence
[GCGCGCGCTACTCACTCCCTCCGGCCGTCCCAGCACGATTACTCCGCCCCCGTGCTCCTCCTCACTCCTCTCCTCCTTGCTCTACGCCTCCTCGCCGCTGACACCGCTGAGCGCTCCGCGCGCCCCCGTAGCTCCCTACACACTGCCTTCCCCACCTCCGCTGTGCCGCCCTCCCCATGACACCACTTCCCGCTCCGCCCCATGCGCCGGACGAGACCACGCCACGGCGCCGGCCCCCACGACCGCCGCCGCCGCCGTAGCAGCAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTTGCCCCGCCTACCCCTGCACCCTACCACGCCGCGGCCGCCCTTCTCGGGCAATCCCTACGTCTCCTCCCCCGCCGGCGGCGTCGCACCCGCCTCCAAGAATACAATGGATACGGTGAAGAATGTTCTTGGCAAGATGGGGAAGAGGTTAGGAGAGGCGGCTCGCAAGACGGAGTCCCTCAACGCCCGGGACTACCCCCGACGGTTCCCCCTACTGCTGGAGCCACTGCGGCGCTCGACCAGGGACGCCGGACTAGCGCCGACGGGCCACTGTAGCGCCGAGCCACCACCGCGGTCCCACGTTCTGCCTATTCGCGCACGCCACGCTGGTCCGAGTTTGTCCCCGCCTGCACCAAGTTTGTCCAACGTTCCGCCAAACATTCTTCGAGATGCTTGGGAACTAGTGATTTGGGGACTACTTCAAGATGGAGGCATCTCACTCAGATTTCAAGGCTGTTCAGTGAGGAAAACTGAGGGGTAGATCTGTTGATGATTTGGGGATATAATGGTGTAGCCCCTGATTTTTTGTTACAACATGACAGAAATTCAGTATTATTGGATGGATTCACGCAATGCGCTGCAATTTGTGCAGAAAAGGCAGTTTTTTTGTTGTGTATGATAGATCAAGTTTATTGGATCAGCTTCTCTTCGGAACTCCCCATTCGAGTTGTTGTGTTTTGGTATGTGGGAAGTATATACGCGATTTTGCTCCAAGTTTGTCTTGATAGAATTTATCTGCGCTGGCACACTTGATTCGGCACAAAGTCCACAACACTGTGCCTCCGCCGACACCGCAGCCAGATCGACCAGTCAAGCATCCACTGTGCCGATGTAATCCCCAGTCAAGCCAGATTGATGGGCAGATCCGATGCACCGGCCAGAAGAACGGGCTGCTCAGTTGTAGGATTGGTTTCGCCCAAAACTGAAGTGAAAAGAATTTGTTGGTGAAAAAAGAAGTTCAGAATCACAGGTTATGTCTCTTGATTGCAAGACAAACTGATTAACTGTGCTTGCAAGGGTGTTTGTAGAAACGGCTTAACCACTATTTCTTCCCAATCCTGGTAACAAGCAACAGACACAAGGTAATAACCTTTGGTGCCAGATGCTGCATCACACTCCTGAGTGAGCAGCAAATGTTTGACAAAATGCTTCTTAGGTACTGTTACTACTCTTGCATGCTATTTGATTCTTTTTTTCCAGGCCCAGTTGGCAGCTAAACTAGTATTGTTTACAAGTCAAAGATATATATATTGCAGAGAAGATCTTTGGTATGTGTTTGGCCTTTTATGTTAAGCGATAAATGACATGCAAAACATAAATTTCAGGTTTGTCATTACTCAAATACCCATTGACTGTATGCGTTGTTTCAAGTTGCAGAACCATACCATTGTCCTTTACAGTATATCTAATCATACTTTTTTTTTGTCCATTCATACTCCATACAAACTATTCTCAATTCTCAACTACCAATGTCTTCATATGGATGATCTTCAGTTGATGATCTTGCTAATTTAAGTGTCGTGACATTATCAGGCTCTAAGGAAGGACATGGCGATCTGCGAGAGCAGCATTGATATTATCAAGGTAACAGCGGCCAGTGTAGTGCCGGTTAATCTTGTATGAATACAGTCTTTATATATGCACACTGCCGATGTAGTACTATGTCTCTATGCATGCTTGTAACAATGCCTAAAAGACCAGGGAGAGGCTATGCAGAGGGATTGGGGAATGGGGACTGCCAATTTTCTACATTGATAAGTTTAGTGTTTCCCCTGGAAGGGATATGGCAGGGATATTCACAAAGTGCAGAATACGTGATTCAGTTGGAGAAAGGCAACACATGTGGAAGATGGTTTGCATAATAAATTATCTTAGGTTAAACTAATGTTTTTTTCTGATCTGGTGTTTTGTACCCTCATAACCATCTAGCTGTTGTAATTCATCAAGTACCCATGTTAAAGTGGTTGTACCCTATAGCAACCTAGCAGGGCTTTACATTTTGTTCTGTGCAAAAGTTGGCATGGAGTAAGAAACAGGGTTATGTTTACAATTTTCAAATAAATTA]
[+] EMBL AK067770 [GCGCGCGCTACTCACTCCCTCCGGCCGTCCCAGCACGATTACTCCGCCCCCGTGCTCCTCCTCACTCCTCTCCTCCTTGCTCTACGCCTCCTCGCCGCTGACACCGCTGAGCGCTCCGCGCGCCCCCGTAGCTCCCTACACACTGCCTTCCCCACCTCCGCTGTGCCGCCCTCCCCATGACACCACTTCCCGCTCCGCCCCATGCGCCGGACGAGACCACGCCACGGCGCCGGCCCCCACGACCGCCGCCGCCGCCGTAGCAGCAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTTGCCCCGCCTACCCCTGCACCCTACCACGCCGCGGCCGCCCTTCTCGGGCAATCCCTACGTCTCCTCCCCCGCCGGCGGCGTCGCACCCGCCTCCAAGAATACAATGGATACGGTGAAGAATGTTCTTGGCAAGATGGGGAAGAGGTTAGGAGAGGCGGCTCGCAAGACGGAGTCCCTCAACGCCCGGGACTACCCCCGACGGTTCCCCCTACTGCTGGAGCCACTGCGGCGCTCGACCAGGGACGCCGGACTAGCGCCGACGGGCCACTGTAGCGCCGAGCCACCACCGCGGTCCCACGTTCTGCCTATTCGCGCACGCCACGCTGGTCCGAGTTTGTCCCCGCCTGCACCAAGTTTGTCCAACGTTCCGCCAAACATTCTTCGAGATGCTTGGGAACTAGTGATTTGGGGACTACTTCAAGATGGAGGCATCTCACTCAGATTTCAAGGCTGTTCAGTGAGGAAAACTGAGGGGTAGATCTGTTGATGATTTGGGGATATAATGGTGTAGCCCCTGATTTTTTGTTACAACATGACAGAAATTCAGTATTATTGGATGGATTCACGCAATGCGCTGCAATTTGTGCAGAAAAGGCAGTTTTTTTGTTGTGTATGATAGATCAAGTTTATTGGATCAGCTTCTCTTCGGAACTCCCCATTCGAGTTGTTGTGTTTTGGTATGTGGGAAGTATATACGCGATTTTGCTCCAAGTTTGTCTTGATAGAATTTATCTGCGCTGGCACACTTGATTCGGCACAAAGTCCACAACACTGTGCCTCCGCCGACACCGCAGCCAGATCGACCAGTCAAGCATCCACTGTGCCGATGTAATCCCCAGTCAAGCCAGATTGATGGGCAGATCCGATGCACCGGCCAGAAGAACGGGCTGCTCAGTTGTAGGATTGGTTTCGCCCAAAACTGAAGTGAAAAGAATTTGTTGGTGAAAAAAGAAGTTCAGAATCACAGGTTATGTCTCTTGATTGCAAGACAAACTGATTAACTGTGCTTGCAAGGGTGTTTGTAGAAACGGCTTAACCACTATTTCTTCCCAATCCTGGTAACAAGCAACAGACACAAGGTAATAACCTTTGGTGCCAGATGCTGCATCACACTCCTGAGTGAGCAGCAAATGTTTGACAAAATGCTTCTTAGGTACTGTTACTACTCTTGCATGCTATTTGATTCTTTTTTTCCAGGCCCAGTTGGCAGCTAAACTAGTATTGTTTACAAGTCAAAGATATATATATTGCAGAGAAGATCTTTGGTATGTGTTTGGCCTTTTATGTTAAGCGATAAATGACATGCAAAACATAAATTTCAGGTTTGTCATTACTCAAATACCCATTGACTGTATGCGTTGTTTCAAGTTGCAGAACCATACCATTGTCCTTTACAGTATATCTAATCATACTTTTTTTTTGTCCATTCATACTCCATACAAACTATTCTCAATTCTCAACTACCAATGTCTTCATATGGATGATCTTCAGTTGATGATCTTGCTAATTTAAGTGTCGTGACATTATCAGGCTCTAAGGAAGGACATGGCGATCTGCGAGAGCAGCATTGATATTATCAAGGTAACAGCGGCCAGTGTAGTGCCGGTTAATCTTGTATGAATACAGTCTTTATATATGCACACTGCCGATGTAGTACTATGTCTCTATGCATGCTTGTAACAATGCCTAAAAGACCAGGGAGAGGCTATGCAGAGGGATTGGGGAATGGGGACTGCCAATTTTCTACATTGATAAGTTTAGTGTTTCCCCTGGAAGGGATATGGCAGGGATATTCACAAAGTGCAGAATACGTGATTCAGTTGGAGAAAGGCAACACATGTGGAAGATGGTTTGCATAATAAATTATCTTAGGTTAAACTAATGTTTTTTTCTGATCTGGTGTTTTGTACCCTCATAACCATCTAGCTGTTGTAATTCATCAAGTACCCATGTTAAAGTGGTTGTACCCTATAGCAACCTAGCAGGGCTTTACATTTTGTTCTGTGCAAAAGTTGGCATGGAGTAAGAAACAGGGTTATGTTTACAATTTTCAAATAAATTA]
consensusID : consensus_13500#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1197 fasta sequence
[TATCCTCGAAAAGAAAAAAAGGGGAGAAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGACATGCACCCGCCGGCCGCCGCCGGAGGAGACCACGCCACGGCGGCGCCGGCCCCCGCGACCGGCGCA-NCC-AAG-CAACAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTGGCCCCGCCCCCCCCTCCGTCCTACCACGCTGCCGCCTCCTCCGCGCCGCCCTACTCGGGCAACCCCTACGTCTCCTNAACCGCCGGCGGCGTCGCGCCCGCCTCCAAGAATACAATGGATACGGTGAAGGATGTTCTCGGCAAGATGGGGAAGAGGTTTGGAGAGGC-GGCTCGCAAGACGGAGACCC-TCACCGGCAACTTCTGGCAACACTTGAAAACTGGACCAAGCATTACAGATGCAGCAATGGGCAGGGTTTCCCAGATCACCAAAGTCATAGCAGAAGGTGGATATGATAAAATCTTCCATCAAACATTTGATGTCCTCCCTGACGAGAAACTGAAGAAACCATATGCATGTTATCTGTCAACCTCTGCTGGTCCTGTCATGGGTGTGCTATACCTGTCCAATAAAAAGCTGGCATTCTGTAGCGATAATCCACTTGCTTACAAGGTTGGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAACTGAGATCAGTGAATCCTTCAACGAGCAGAACAAATGCATCTGAGAAATACATCCAGGTGGTTTCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCGCCGTAAAGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCAATGTGTACCGACTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATAGTTACTCTCTGTTGTTGTCCGACTGGATTTCATTTGGCTTCCTGCAATATCAAACGAGTGTCTGTTCTGACGTTAAAAAAAAAAACNAAAA]
[+] EMBL AK068057 [TATCCTCGAAAAGAAAAAAAGGGGAGAAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGACATGCACCCGCCGGCCGCCGCCGGAGGAGACCACGCCACGGCGGCGCCGGCCCCCGCGACCGGCGCA GCCGCAG CAACAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTGGCCCCGCCCCCCCCTCCGTCCTACCACGCTGCCGCCTCCTCCGCGCCGCCCTACTCGGGCAACCCCTACGTCTCCTCACCCGCCGGCGGCGTCGCGCCCGCCTCCAAGAATACAATGGATACGGTGAAGGATGTTCTCGGCAAGATGGGGAAGAGGTTTGGAGAGGC GGCTCGCAAGACGGAGACCC TCACCGGCAACTTCTGGCAACACTTGAAAACTGGACCAAGCATTACAGATGCAGCAATGGGCAGGGTTTCCCAGATCACCAAAGTCATAGCAGAAGGTGGATATGATAAAATCTTCCATCAAACATTTGATGTCCTCCCTGACGAGAAACTGAAGAAACCATATGCATGTTATCTGTCAACCTCTGCTGGTCCTGTCATGGGTGTGCTATACCTGTCCAATAAAAAGCTGGCATTCTGTAGCGATAATCCACTTGCTTACAAGGTTGGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAACTGAGATCAGTGAATCCTTCAACGAGCAGAACAAATGCATCTGAGAAATACATCCAGGTGGTTTCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCGCCGTAAAGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCAATGTGTACCGACTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATAGTTACTCTCT ]
[+] EMBL AU056406 [ AAAAAAAGGGGAGAAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGACATGCACCCGCCGGCCGCCGCCGGAGGAGACCACGCCACGGCGGCGCCGGCCCCCGCGACCGGCGCA NNC AAG CAACAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGANGACGTGGCCCCGCCCCCCCCTCCGTCCTACCACGCTGCCGCCTCCTCCGCGCCGCCCTANTCGGGCAACCCCTACGTCTCCTNAACCGCCGGCGG GTCGCGCCCGCCTCCAAGAATACAATGGATACGGTNAAGGATGTTCTCGGGAAGATGGGGAAGANGTTTTGAGANGCGGGCTCGC ]
[+] EMBL C97721 [ AAAAAAAGGGGAGAAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGACATGCACCCNTNGGCCGCCGCCGGAGGAGACCACGCCANGGCGGCGCCGGCCCCCGCNACCGGNGCA N C AGG CAACAGCNTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTGGCCCC ]
[+] EMBL AU056238 [ AAAAAAAGGGGAGAAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGACATGCACCCGCNGGCCGCCGCCGGAGGAGACCACGCCANGGCGGCGCCGGCCCCCGCGACCGGCGCAGNCG AGA CAACAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTGGCCCCGCCCCCCCCTCCGTCCTACCACG ]
[+] EMBL AU067856 [ AAAAAAAGGGGAGAAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGNGCACGACGCGGCGCCCAGCTGTACCGTCTNACCAGTAGGCCCCACCTCCCCGNCGTCGACATGCACCCGNCNGNCGCNGACGACGGAGACCACGCNACGGCGGCGTCGaca ]
[+] EMBL OSC107161 [ AAAAGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGACATGCACCCGNCGGCCGCCGCCGNAGGAGACCACGCCACGGCGGCGCC GCCCCCGCGACCGGNGCA N C ATG CAACAGCNTCGGACTACGCGCACTACCCGAGGCTCTCGCCGGAGGACGTGGCCCCGNCCCCCCCTCCGTCCTACCACGCTGCCGNCTCCTCCGNGCCGCCCTACTCGGGCAA CCCTACGTNTTCTNAACCGNCGG ]
[+] EMBL OSC100401 [ ccgGAAAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTTGAGCACGACGCGGCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCCCCGCCGTCGNCATGCACCCGCCGGCCGCCGNCGGAGGAGACCACGTCACGGCGGCGNCGGCCCCCGTGACCGGCGNA NCT AAGTNAACAGCGTCGGACT ]
[+] EMBL C28880 [ AAGACGGAGACCCTTCACCGGCAACTTCTGGCAACACTTGAAAACTGGACCAAGCATTACAGATGCAGCAATGGGCAGGGTTTCCCAGATCACCAAAGTCATAGCAGAAGGTGGATATGATAAAATCTTCCATCAAACATTTGATGTCCTCCCTGACGAGAAACTGAAGAAACCATATGCATGTNATCTGTCAACCTCTGCTGGTCCTGTCATGGGTGTGCTATACCTGT ]
[+] EMBL AU166271 [ TCCACTTGCTTACAAGGTTGGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAACTGAGATCAGTGAATCCTTCAACGAGCAGAACAAATGCATCTGAGAAATACATCCAGGTGGTTTCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCGCCGTAAAGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCAATGTGTACCGACTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATAGTTAaaaaaa ]
[+] EMBL AU056407 [ ATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGNCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGNGTTGGCATTTCTTGCAATGTGTACCGANTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATAGTTACTCTCTGTTGTTGTCCGACTGGATTTCATTTGGCTTCCTGCAATATCAAACGAGTGTCTGTTCTGACGTTAAAAAAAAAAACNAAAA]
consensusID : consensus_13500#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 680 fasta sequence
[GCCCTTCACCGGCACTTCTGGGCAACCCTTGAAAACTGGCCCAAGCTTTNCCAGATNCAGCAATGGGCAGGTTTTCCCAGNTCACCAAAGTCATAGCCAGAAGGTGGATATGATAAATCTTCCATCAAACATTTGATGTCCTCCCTGNCGAGAAACTGAAAGAANCCATATGCATGTTATCTGTCAACCTCTGCTGGNCCTGTCATGGGTGTGCTATNCCTGTCCAATAAAAAGNTGGCATTCTGTAGCGATAATCCACTTGCTTACAAGGTTGGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAACTGAGATCAGTGAATCCTTCAACGAGCAGAACAAATGCATCTGAGAAATACATCCAGGTGGTTNCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCNCCGTAAAGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCAATGTGTACCGACTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATA---AAAAAAAAAAAAAAAAAA]
[+] EMBL AU085693 [GCCCTTCACCGGCACTTCTGGGCAACCCTTGAAAACTGGCCCAAGCTTTNCCAGATNCAGCAATGGGCAGGTTTTCCCAGNTCACCAAAGTCATAGCCAGAAGGTGGATATGATAAATCTTCCATCAAACATTTGATGTCCTCCCTGNCGAGAAACTGAAAGAANCCATATGCATGTTATCTGTCAACCTCTGCTGGNCCTGTCATGGGTGTGCTATNCCTGTCCAATAAAAAGNTGGCATTCTGTAGCGATAATCCACTTGCTTACAAGGTTGGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAACTGAGATCAGTGAATCCTTCAACGAGCAGAACAAATGCATCTGAGAAATACATCCAGGTGGTTNCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCNCCGTAAAGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCAATGTGTACCGACTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATA AAAAAAAAAAAAAAAAA ]
[+] EMBL AU056239 [ TTACAAGGTTGGAGACCAAGATGAGTGGAGCTACTNTCAGGTTGTCATTCCCCACACCCAACTNAGATCAGTGAATCCTTCAACGAGCAGAACAAATGCATCTGAGNAATACATCCAGGTGGTTTCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTNCTATGACAGCGCCGTAAAGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTCCATAGATTGGGGATAGCAAGCCCAACATATTACAGTTTGTGATATACTCTGTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCAATGTGTACCGACTTGAAACGGTTTTTGATATGTGACATCATGATCTCTCGATAGTTAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13500#1 -------------------------TATCCTCGAAAAGAAAAAAAGGG---GAGAAAAGA 32
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GCGCGCGCTACTCACTCCCTCCGGCCGTCCCAGCACGATTACTCCGCCCCCGTGCTCCTC 60
consensus_13500#1 AAAAAAAGGCAACCACCTGAAGCGTCCGTTGGGTCCAGGAATTACGTCGAGCACGACGCG 92
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CTCACTCCTCTCCTCCTTGCTCTACGCCTCCTCGCCGCTGACACCGCTGAGCGCTCCGCG 120
consensus_13500#1 GCGCCCAGCTGTACCGTCTGACCAGTAGGCCCCACCTCC------CCGCCGTCGACATGC 146
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CGCCCCCGTAGCTCCCTACACACTGCCTTCCCCACCTCCGCTGTGCCGCCCTCCCCATGA 180
consensus_13500#1 ACCCGCCGGCCGC-----------CGCCGGAGGAGACCACGCCACGGCGGCGCCGGCCCC 195
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CACCACTTCCCGCTCCGCCCCATGCGCCGGACGAGACCACGCCACGGCGCCGGCCCCCAC 240
consensus_13500#1 CGCGACCGGCGCANCCA-AGCAACAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCC 254
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GACCGCCGCCGCCGCCGTAGCAGCAGCGTCGGACTACGCGCACTACCCGAGGCTCTCGCC 300
consensus_13500#1 GGAGGACGTGGCCCCGCCCCCCCCTCCGTCCTACCACGCTGCCGCCTCCTCCGCGCCGCC 314
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GGAGGACGTTGCCCCGCCTACCCCTGCACCCTACCACGCCGCGGCC-----------GCC 349
consensus_13500#1 CTACTCGGGCAACCCCTACGTCTCCTNAACCGCCGGCGGCGTCGCGCCCGCCTCCAAGAA 374
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CTTCTCGGGCAATCCCTACGTCTCCTCCCCCGCCGGCGGCGTCGCACCCGCCTCCAAGAA 409
consensus_13500#1 TACAATGGATACGGTGAAGGATGTTCTCGGCAAGATGGGGAAGAGGTTTGGAGAGGCGGC 434
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 TACAATGGATACGGTGAAGAATGTTCTTGGCAAGATGGGGAAGAGGTTAGGAGAGGCGGC 469
consensus_13500#1 TCGCAAGACGGAGACCCTCACCGGCAACTTCTGGCAACACTTGAAAACTGGACCAA--GC 492
consensus_13500#2 ------------GCCCTTCACCGGCACTTCTGGGCAACCCTTGAAAACTGGCCCAA--GC 46
consensus_13500#0 TCGCAAGACGGAGTCCCTCAACG----CCCGGGACTACCCCCGACGGTTCCCCCTACTGC 525
* ** *** ** * * ** * ** * ** * **
consensus_13500#1 ATTAC-AGATGCAGCAATGGGCAGGGTTTCCCAGATCACCAAAGTCATAGC-AGAAGGTG 550
consensus_13500#2 TTTNCCAGATNCAGCAATGGGCAGGTTTTCCCAGNTCACCAAAGTCATAGCCAGAAGGTG 106
consensus_13500#0 TGGAGCCACTGCGGCGCTCGACCAGGGACGCCGGACTAGCGCCGACGGGCC---ACTGTA 582
* * ** * * * * ** * * * * * * * **
consensus_13500#1 GATATGATAAAAT-CTTCCATCAAACATTTGATGTCCTCCCTGACGAGAAACTGAA-GAA 608
consensus_13500#2 GATATGATAAA-T-CTTCCATCAAACATTTGATGTCCTCCCTGNCGAGAAACTGAAAGAA 164
consensus_13500#0 GCGCCGAGCCACCACCGCGGTCCCACGTTCTGCCTATTCGCGCACGCCACGCTGGTCCGA 642
* ** * * * ** ** ** * ** * ** * *** *
consensus_13500#1 A-------CCATATGCATGTTATCTGTCAACC--TCTGCTGGTCCTGTCATGGG-TGTGC 658
consensus_13500#2 N-------CCATATGCATGTTATCTGTCAACC--TCTGCTGGNCCTGTCATGGG-TGTGC 214
consensus_13500#0 GTTTGTCCCCGCCTGCACCAAGTTTGTCCAACGTTCCGCCAAACATTCTTCGAGATGCTT 702
** **** * **** * * ** ** * * * * **
consensus_13500#1 TATACCTGTCCAATAAAAAGCTGGCATTCTGTAGCGATAATCCACTT-GCTTACAAGGTT 717
consensus_13500#2 TATNCCTGTCCAATAAAAAGNTGGCATTCTGTAGCGATAATCCACTT-GCTTACAAGGTT 273
consensus_13500#0 GGGAACTAGTGATTTGGGGACTACTTCAAGATGGAGGCATCTCACTCAGATTTCAAGGCT 762
** * * * * * * * **** * ** ***** *
consensus_13500#1 GGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAAC--TGAGAT 775
consensus_13500#2 GGAGACAAAGATGAGTGGAGCTACTATAAGGTTGTCATTCCCCACACCCAAC--TGAGAT 331
consensus_13500#0 GTTCAGTGAGGAAAACTGAGGGGTAGATCTGTTGATGATTTGGGGATATAATGGTGTAGC 822
* * ** * *** **** * * ** **
consensus_13500#1 CAGTGAATCCTT----CAACGAG-CAGAA---CAAATGCATCTGAGAAATACATCCAGGT 827
consensus_13500#2 CAGTGAATCCTT----CAACGAG-CAGAA---CAAATGCATCTGAGAAATACATCCAGGT 383
consensus_13500#0 CCCTGATTTTTTGTTACAACATGACAGAAATTCAGTATTATTGGATGGATTCACGCAATG 882
* *** * ** **** * ***** ** ** ** ** ** **
consensus_13500#1 GGTTTCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCGCCGT 887
consensus_13500#2 GGTTNCCGTTGATAATCATGAGTTCTGGTTCATGGGCTTCGTGTACTATGACAGCNCCGT 443
consensus_13500#0 CGCTGCAATTTGTG--CAGAAAAGGCAGTTTTTTTGTTGTGTATGATAGATCAAGTTTAT 940
* * * ** * ** * *** * * * ** * ** ** *
consensus_13500#1 AA----AGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTC 943
consensus_13500#2 AA----AGAATCTGCAGGAAGCACTTCAGGAGGCTCAGAATCTACGAGCTTAGTGATGTC 499
consensus_13500#0 TGGATCAGCTTCTCTTCGGAACTCCCCATTCGAGTTGTTGTGTTTTGGTAT-GTGGGAAG 999
** *** * * * * ** * * * * * * ***
consensus_13500#1 CATAGATTGGGGATAGC---AAGCCCAACATATTACAGTTTGT-------GATATACTCT 993
consensus_13500#2 CATAGATTGGGGATAGC---AAGCCCAACATATTACAGTTTGT-------GATATACTCT 549
consensus_13500#0 TATATACGCGATTTTGCTCCAAGTTTGTCTTGATAGAATTTATCTGCGCTGGCACACTTG 1059
*** * * * ** *** * * ** * *** * * * ***
consensus_13500#1 GTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCA 1053
consensus_13500#2 GTGTTTCATCAAATTGGCAGTCGTCTGTATTTTGTTGGATAGGTGTTGGCATTTCTTGCA 609
consensus_13500#0 ATTCGGCACAAAGTCCACAACACTGTGCCTCCGCCGACACCGCAGCCAGATCGACCAGTC 1119
* ** ** * ** * ** * * * * * * *
consensus_13500#1 ATGTGT--ACCGACTTGAAACGGTTTTTGAT-ATGTGACATC-ATGATCT--CTCGATAG 1107
consensus_13500#2 ATGTGT--ACCGACTTGAAACGGTTTTTGAT-ATGTGACATC-ATGATCT--CTCGATAA 663
consensus_13500#0 AAGCATCCACTGTGCCGATGTAATCCCCAGTCAAGCCAGATTGATGGGCAGATCCGATGC 1179
* * * ** * ** * * * * * ** *** * ****
consensus_13500#1 TTACTCTCTGTTGTTGTCCGACTGGATTTCAT--TTGGCTTCCTGCAATATCAAACGAGT 1165
consensus_13500#2 AAAAAAAAAAAAAAAAA------------------------------------------- 680
consensus_13500#0 ACCGGCCAGAAGAACGGGCTGCTCAGTTGTAGGATTGGTTTCGCCCAAAACTGAAGTGAA 1239
consensus_13500#1 GTCTGTTCTGACGTTAAAAAAAAAAACNAAAA---------------------------- 1197
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 AAGAATTTGTTGGTGAAAAAAGAAGTTCAGAATCACAGGTTATGTCTCTTGATTGCAAGA 1299
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CAAACTGATTAACTGTGCTTGCAAGGGTGTTTGTAGAAACGGCTTAACCACTATTTCTTC 1359
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CCAATCCTGGTAACAAGCAACAGACACAAGGTAATAACCTTTGGTGCCAGATGCTGCATC 1419
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 ACACTCCTGAGTGAGCAGCAAATGTTTGACAAAATGCTTCTTAGGTACTGTTACTACTCT 1479
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 TGCATGCTATTTGATTCTTTTTTTCCAGGCCCAGTTGGCAGCTAAACTAGTATTGTTTAC 1539
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 AAGTCAAAGATATATATATTGCAGAGAAGATCTTTGGTATGTGTTTGGCCTTTTATGTTA 1599
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 AGCGATAAATGACATGCAAAACATAAATTTCAGGTTTGTCATTACTCAAATACCCATTGA 1659
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CTGTATGCGTTGTTTCAAGTTGCAGAACCATACCATTGTCCTTTACAGTATATCTAATCA 1719
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 TACTTTTTTTTTGTCCATTCATACTCCATACAAACTATTCTCAATTCTCAACTACCAATG 1779
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 TCTTCATATGGATGATCTTCAGTTGATGATCTTGCTAATTTAAGTGTCGTGACATTATCA 1839
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GGCTCTAAGGAAGGACATGGCGATCTGCGAGAGCAGCATTGATATTATCAAGGTAACAGC 1899
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GGCCAGTGTAGTGCCGGTTAATCTTGTATGAATACAGTCTTTATATATGCACACTGCCGA 1959
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 TGTAGTACTATGTCTCTATGCATGCTTGTAACAATGCCTAAAAGACCAGGGAGAGGCTAT 2019
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GCAGAGGGATTGGGGAATGGGGACTGCCAATTTTCTACATTGATAAGTTTAGTGTTTCCC 2079
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 CTGGAAGGGATATGGCAGGGATATTCACAAAGTGCAGAATACGTGATTCAGTTGGAGAAA 2139
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 GGCAACACATGTGGAAGATGGTTTGCATAATAAATTATCTTAGGTTAAACTAATGTTTTT 2199
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 TTCTGATCTGGTGTTTTGTACCCTCATAACCATCTAGCTGTTGTAATTCATCAAGTACCC 2259
consensus_13500#1 ------------------------------------------------------------
consensus_13500#2 ------------------------------------------------------------
consensus_13500#0 ATGTTAAAGTGGTTGTACCCTATAGCAACCTAGCAGGGCTTTACATTTTGTTCTGTGCAA 2319
consensus_13500#1 -----------------------------------------------------
consensus_13500#2 -----------------------------------------------------
consensus_13500#0 AAGTTGGCATGGAGTAAGAAACAGGGTTATGTTTACAATTTTCAAATAAATTA 2372
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||