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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13502#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1556 fasta sequence
[CCGCAAGCCACCTTGCTCTGCTTGCTACTCTCGTTGTTGGCGCGGCGCGGCCCGGCCTTGGGGGGGGATGGATGGGGATGTGGCTGGGGTGGGAGTGGGAGCAGCCATAGATTTCCTCCTCCTCCTCCTCCCTTAGCCGCCACCACCACCTCCCTCCACCACCATGCCGTCACCATCCCAGCCGTCCTCCTCCTCCTCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAACCCTCCACTCCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCGACGATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGATCTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCAGCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACCGAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCTCTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGCGACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAGAAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTAAAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC-TCCACCC-ACT-CCCTCAGCTGATCGCCCATACGTCT-GTCCTTATGATGGTTGTGCCAAGGCATA-CA-TTC-ATGAGT---A-CA-AA-CTTAA--CCT-CCATCTGAA-GAAAGAGCACCCTAAT-CACTA-CCAGGATGCCGGTGCTCAAGCCGCCTCTTC-GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC-ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA-GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG-CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA-CAAAAT-CTTAGCTTTTGGGTTATAGTTTTGCAT-ACATGTACAATATTCAAAATAAGGCT-GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATTA-ATC-AAATTCAAAAGGAC-AATCACAGAATACAAAAAAAAAGAAT]
[+] EMBL AK103760 [CCGCAAGCCACCTTGCTCTGCTTGCTACTCTCGTTGTTGGCGCGGCGCGGCCCGGCCTTGGGGGGGGATGGATGGGGATGTGGCTGGGGTGGGAGTGGGAGCAGCCATAGATTTCCTCCTCCTCCTCCTCCCTTAGCCGCCACCACCACCTCCCTCCACCACCATGCCGTCACCATCCCAGCCGTCCTCCTCCTCCTCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAACCCTCCACTCCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCGACGATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGATCTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCAGCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACCGAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCTCTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGCGACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAGAAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTAAAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCC ACT CCCTCAGCTGATCGCCCATACGTCT GTCCTTATGATGGTTGTGCCAAGGCATA CA TTC ATGAGT A CA AA CTTAA CCT CCATCTGAA GAAAGAGCACCCTAAT CACTA CCAGGATGCCGGTGCTCAAGCCGCCTCTTC GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA CAAAAT CTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAAGGCT GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATTA ATC AAATTCAAAA ]
[+] EMBL CB668842 [ AGATTTCCTCCTCCTCCTCCTCCCTTAGCCGCCACCACCACCTCCCTCCACCACCATGCCGTCACCATCCCAGCCGTCCTCCTCCTCCTCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAACCCTCCACTCCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCGACGATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGATCTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCAGCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACCGAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCTCTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGCGACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAGAAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTAAAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCC ]
[+] EMBL CB656173 [ CCTCCTCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAACCCTCCACTCCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCGACGATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGATCTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCAGCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACCGAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCTCTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGCGACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAGAAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTAAAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCCAACT CCTCAGCTG ]
[+] EMBL CB641599 [ TCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAACCCTCCACTCCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCGACGATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGATCTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCAGCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACCGAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCTCTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGCGACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAGAAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTAAAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCC ACT CCCTCAGCTGATCGCCCATACGTCT G ]
[+] EMBL CB653762 [ TCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCCAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCC ACT CCCTCAGCTGATCGCCCATACGTCT GTCCTTATGATGGTTGTGCCAAGGCATA CA TTC ATGAGT A CA AA CTTAA CCT CCATCTGAA GAAAGAGCACCCTAAT CACTA CCAGGATGCCGGTGCTCAAGCCGCCTCTTC GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCACATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA CAAAAT CTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAACGCT GGGTAGCTGGTCAGAATTG ]
[-] EMBL CB668843 [ AGTACCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCACCAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCC ACT CCCTCAGCTGATCGCCCATACGTCT GTCCTTATGATGGTTGTGCCAAGGCATA CA TTC ATGAGT A CA AA CTTAA CCT CCATCTGAA GAAAGAGCACCCTAAT CACTA CCAGGATGCCGGTGCTCAAGCCGCCTCTTC GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA CAAAAT CTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAAGGCT GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATAA GGC AAATTCAAAAGGAC AATC ]
[+] EMBL AU056840 [ CCCAGAATGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCC ACT CCCTCAGCTGATCGCCCATACGTCT GTCCTTATGATGGTTGTGCCAAGGCATA CA TTC ATGAGT A CA AA CTTAA CCT CCATCTGAA GAAAGAGCACCCTAAT CACTA CCAGGATGCCGGTGCTCAAGCCGCCTCTTC GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA CAAAAT CTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAAGGCTGGGGTAGTTGGTCAG ATTGNGAATT ]
[-] EMBL CB656174 [ GAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAATAGTCACACACCGAAACCGTCAGCAGC TCCACCC ACT CCCTCAGCTGATCGCCCATACGTCT GTCCTTATGATGGTTGTGCCAAGGCATA CA TTC ATGAGT A CA AA CTTAA CCT CCATCTGAA GAAAGAGCACCCTAAT CACTA CCAGGATGCCGGTGCTCAAGCCGCCTCTTC GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA CAAAAT CTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAAGGCT GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATTA ATC AAATTCAAAAGGAC AATCACAGAATACAAAAAAAAAGA ]
[-] EMBL CB641600 [ GACCACTCCCATAATAGTCACACACTGAAACCGTCAGCAGT TCCACCC ACT CCCTCAGTTGATCGCCCATACGTCT GTCTTTATGATGGTTGTGCCAAGGCATA CA TTC ATGAGT A CA AA CTTAT CCT CCATGTGAA GAAAGAGCCCCCTAAT CACTA CCAGGATGCCGGTGTTCAATCCGCTTCTTA GAAGATGTTGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCATAAGTGCAGGGGTTACACAGAGCC ATACCAACCTCTTGTTAGTGTTGTCGAAGAGCCCCA GTGGCTGAGGAATGTGTTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTCCAGAGCTGTTAGCAGCGACGACGATGAGGAGCCTGAGGACGAAGAATGAGGTGCTCAGATCAGTCGTTTTTTCATCCAGTGTTTGTGCATATGATTTA CAAAATCCTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAAGGCT GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTATGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATTAGGTC AAATTCAAACGTAC AATCGCAGTCTTCAAAAAAAAGGGAT]
[+] EMBL AU056841 [ CATAATAGTCACACACCGAAACCGTCAGCAGCTTCCACCC ACTCCCCTCAGCTGATCGCCCATACGTCTGGTCCTTATGATGGTTTTGCCAAGGCTTA CA TTC ATGNGT ACCA AA CTTAA CCT CCATCTGAA GAAAGAGCACCCTAATNCACTACCCAGGATGCCGGTGCTCAAGCCGCCTCTTC GAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCC ATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCA GTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGG CGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTA CAAAAT CTTAGCTTTTGGGTTATAGTTTTGCAT ACATGTACAATATTCAAAATAAGGCT GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATTA ATC AAATTCAAAAGGAC AATCACAGAATACAAAAAAA ]
[+] EMBL BM418668 [ caATACCATTTCAATGAGTTNCA CATAACCTTAAACCCTCCCATCTGAATGAAAGAGCACCCTAAT CACTA CCAGGAT CCGGTGCTCAAGCCACCTCTTCGGAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGATGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCCNATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCACGTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGGTCGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTACCAAAAT CTTAGCTTTTGGGTTATAGTTTTGCATAACATGTACAATATTCAAAATAAGGCT GGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGTAATGTTGGGCTGCTCCCATTA ATCAAAATTCNAAAGGACAAATCACAGAAAAAAAAAA ]
consensusID : consensus_13502#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 462 fasta sequence
[TGGTAGTGATTAGGGTGCTCTAGCCGCCTCTTCGAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCCATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCAGTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCG-ACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTACAAAATC-TTAGC--TTTTGGG-TTATAG-TTTTGCATACNATGTACAATATTTCAAAATTAAGGNTGGGTAGTTGGTCAGAATTNAGAATTTACCCCCNTTTACTTCTTGAAATTATTGCAGTGTTGGTAA]
[+] EMBL CA999396 [TGGTAGTGATTAGGGTGCTCTAGCCGCCTCTTCGAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTAAGCGCAGGGGTTACACAGAGCCATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCAGTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCG ACGACGATGAGGAGACTGAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTACAAAATC TTAGC TTTTGGG TTATAG TTTTGC ]
[+] EMBL AU033297 [ tTTACACAGAGCCATACCAACCTCCTGTNAGTGTTGTCGAAGAGCACCAGTGGCCGAGGAATGTNCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATGTTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCGAANGACGATGAGGNGACTNAGGACGANGAATNAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATNATTTACAAAATCTTTAGCTTTTTTGGGTTTATAGNTTTTGCATACNATGTACAATATTTCAAAATTAAGGNTGGGTAGTTGGTCAGAATTNAGAATTTACCCCCNTTTACTTCTTGAAATTATTGCAGTGTTGGTAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13502#0 CCGCAAGCCACCTTGCTCTGCTTGCTACTCTCGTTGTTGGCGCGGCGCGGCCCGGCCTTG 60
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 GGGGGGGATGGATGGGGATGTGGCTGGGGTGGGAGTGGGAGCAGCCATAGATTTCCTCCT 120
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 CCTCCTCCTCCCTTAGCCGCCACCACCACCTCCCTCCACCACCATGCCGTCACCATCCCA 180
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 GCCGTCCTCCTCCTCCTCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAACCCTCCACT 240
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 CCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCGACGATGAT 300
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 GCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGATCTGGT 360
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 CGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCAGCTCT 420
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 CAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACCGAGGT 480
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 TCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCTCTTAG 540
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 GAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGCGACAA 600
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 GAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAGAAGAA 660
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 CTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTAAAGGC 720
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 ACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGTGCTCG 780
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 AAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAGGGTGG 840
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 TCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCCCATAA 900
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 TAGTCACACACCGAAACCGTCAGCAGCTCCACCCACTCCCTCAGCTGATCGCCCATACGT 960
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 CTGTCCTTATGATGGTTGTGCCAAGGCATACATTCATGAGTACAAACTTAACCTCCATCT 1020
consensus_13502#1 ------------------------------------------------------------
consensus_13502#0 GAAGAAAGAGCACCCTAATCACTACCAG-GATGCCGGTGCTCAAGCCGCCTCTTCGAAGA 1079
consensus_13502#1 ----------------------TGGTAGTGATTAGGGTGCTCTAGCCGCCTCTTCGAAGA 38
* ** *** ******* *****************
consensus_13502#0 TGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTA 1139
consensus_13502#1 TGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTCCCTA 98
************************************************************
consensus_13502#0 AGCGCAGGGGTTACACAGAGCCATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCAGT 1199
consensus_13502#1 AGCGCAGGGGTTACACAGAGCCATACCAACCTCCTGTTAGTGTTGTCGAAGAGCACCAGT 158
************************************************************
consensus_13502#0 GGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATG 1259
consensus_13502#1 GGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGATAATG 218
************************************************************
consensus_13502#0 TTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACG 1319
consensus_13502#1 TTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAGGACG 278
************************************************************
consensus_13502#0 AAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTACAA 1379
consensus_13502#1 AAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGATTTACAA 338
************************************************************
consensus_13502#0 AATCTTAGCTTTTGGGTTATAGTTTTGCATACA-TGTACAATATTCAAAA--TAAGGCTG 1436
consensus_13502#1 AATCTTAGCTTTTGGGTTATAGTTTTGCATACNATGTACAATATTTCAAAATTAAGGNTG 398
******************************** *********** *** ***** **
consensus_13502#0 GGTAGTTGGTCAGAATTGAGAATT-ACCCCCCTTC-CTTCT--GAATTAT-GCAG-GTTG 1490
consensus_13502#1 GGTAGTTGGTCAGAATTNAGAATTTACCCCCNTTTACTTCTTGAAATTATTGCAGTGTTG 458
***************** ****** ****** ** ***** ****** **** ****
consensus_13502#0 GTAATGTTGGGCTGCTCCCATTAATCAAATTCAAAAGGACAATCACAGAATACAAAAAAA 1550
consensus_13502#1 GTAA-------------------------------------------------------- 462
****
consensus_13502#0 AAGAAT 1556
consensus_13502#1 ------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||