cluster # 13507

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Oryza sativa
cluster # 13507 cluster # 13507 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13507#0 length = 1653 sequences # 11

consensus_13507#1 length = 787 sequences # 1
consensus_13507#2 length = 690 sequences # 1

consensusID : consensus_13507#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1653
fasta sequence

                              [CTCAGGCAAGCGAGCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCTAGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAATTCGGCTACACAAACATTTGACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTANATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT-CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA-CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTT-CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATG-AAGCTAATAGATATTTCCTGTTGAATTGTAAAAAAAAAAAAAAAGG]

[+] EMBL CB670321             [CTCAGGCAAGCGAGCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCTAGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAATTCGGCTACACAAACATTTGACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTANATCTTCTTCGGAGAAGAGCAGAGATGAACGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAAATTTATAACCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB643253             [                                                                                                                                                                                                          CCTCCCTTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAATTCGGCTACACAAACATTTGACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTAAATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTC AACGACGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB000468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTTCGGAGAAGAGCAGAGATGAAGGTGAGCCCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTT                                                                                                                                                                                    ]
[+] EMBL CA998751             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAGAGCAGAGATGAAGGTGAGCGCTTTGAGTGTCTCATTGCTGGCTTAAAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT CCTTCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGGAATATCCTCATATTGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB629707             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGATCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCATGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGGATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATG AAGCTAATAGATATTTCCTG                          ]
[-] EMBL CB670322             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTT CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATG AAGCTAATAGATATTTCCTG                          ]
[-] EMBL CB674917             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTT CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATG AAGCTAATAGATATTTCCTGTTGAATT                   ]
[-] EMBL CB683484             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACT CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTT CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATG AAGCTAATAGATATTTCCTGTTGAATTGTAAAAAAAAAAAAAAAGG]
[-] EMBL CB643254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACGCCCACT CCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTTTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTTTAAATGTTTTTGATCCCCATTTTT CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACGGGTACCCTCTACTGTATCAGAGTACAATG AAGCTAATAGATATTTCCTNTTGA                      ]
[-] EMBL CB669490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTGGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAA CAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTTTGATCCCCATTCTT CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATGAAAGGGAATAGATATTTCCTGTTNAA                     ]
[-] EMBL CF311357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAACCAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGT AAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTT CCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATG AAGCTAATAGATATTTCCTGTTGAATTGTATTTAAAAAA       ]




>consensus_13507#0
CTCAGGCAAGCGAGCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCT
AGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCG
GCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGC
CCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCG
GCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGG
GGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCG
CGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGG
TCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGC
GGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAATTCGGCTACACAAACATTTG
ACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAA
GAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGCCTTGTTGCTAGAT
ATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTANATCTTCTTCGGAGAAGAGCA
GAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAATTTTATAA
CCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCTTTCTTATGTGGCC
TGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAA
AGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTG
ATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCAT
ATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAAC
ATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATG
TTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAG
AAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCC
AGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAA
ACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGA
ACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTT
GCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTAT
TTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCATTAACTTAGTTATCACAT
CCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATGAAGCTAATAGATA
TTTCCTGTTGAATTGTAAAAAAAAAAAAAAAGG

consensusID : consensus_13507#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 787
fasta sequence

                              [CCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCAAGACTGTATCAGAGTACAATGAAGCTAATAGATCAAAAAAGGA]

[-] EMBL CB674146             [CCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCATTAACTTAGTTATCACATCCAAAGTGTATCATAACTTGTACCCAAGACTGTATCAGAGTACAATGAAGCTAATAGATCAAAAAAGGA]




>consensus_13507#1
CCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAG
CATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTGAT
GACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATAT
GCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGCCAACAT
GAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTCCATGTT
GATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGATCTTTATGACCCAGAA
GAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAGCTTCCAG
AAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTGGCTAAAC
TCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTCCCTGAAC
TCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCAATTTTGC
TTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCAATTATTT
AGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCATTAACTTAGTTATCACATCC
AAAGTGTATCATAACTTGTACCCAAGACTGTATCAGAGTACAATGAAGCTAATAGATCAA
AAAAGGA

consensusID : consensus_13507#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence

                              [GCGACCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCTAGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGGTGGTGGATCCGTGTTACTGTTTGTTTTTGGTTCATCGCTTTGCTTGTCAGCTCTGATGCAACCTGCTGGCATTTGGCTTGCAGTCGTAAAATTAGCCTGGTTGTTTTTTTTTTTTTTTGCAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCCACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGG]

[+] EMBL CB683937             [GCGACCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCTAGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCCTCGTCGGGAGGTGGTGGATCCGTGTTACTGTTTGTTTTTGGTTCATCGCTTTGCTTGTCAGCTCTGATGCAACCTGCTGGCATTTGGCTTGCAGTCGTAAAATTAGCCTGGTTGTTTTTTTTTTTTTTTGCAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCCACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGG]




>consensus_13507#2
GCGACCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCTAGGTCACCG
AGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCGGCGCCGCCT
CGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGCCCCGCGCCG
TCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCGGCGCGCGGT
GGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGGGGAAGCGGC
CGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGG
AGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGGTCAATGGCC
TCGTCGGGAGGTGGTGGATCCGTGTTACTGTTTGTTTTTGGTTCATCGCTTTGCTTGTCA
GCTCTGATGCAACCTGCTGGCATTTGGCTTGCAGTCGTAAAATTAGCCTGGTTGTTTTTT
TTTTTTTTTGCAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGCGGATGC
CGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAATCGATCCACAGGCAAATCTATCTCT
TGCGGAGTTCAGTTGCTCTCTGAATTGTGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13507#0      CTCAGGCAAGCGAGCCCCCCCTACCTTGCCTCCGAAGTAACCGCCGCCGCCGCGGCAGCT 60
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      AGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCGGATGATCGCCGCCG 120
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      GCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGCCCATTCGCGGTGGC 180
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      CCCGCGCCGTCGCGCGCCTCCGCCTCGCGTTCCGCTCCCCGGCGCCCGCGGCCAGCGGCG 240
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      GCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACCGGCGGCGGTGAAGGAGGCGAAGG 300
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      GGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGGGGCGGAGGGGAGGACGTGTGGAGCG 360
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      CGCAGGCGGAGGCCGAGGTGGCGCAGGGCGGGGGTTTCCCCGAGCACCTCGTCGTCATGG 420
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      TCAATGGCCTCGTCGGGAGCGCGGATGACTGGAAATTCGCGGCGGAGCAGTTCGTGAGGC 480
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      GGATGCCGGAAAAAGTGATCGTGCACCGAAGCCAGTGCAATTCGGCTACACAAACATTTG 540
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      ACGGAGTTGACCTGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAA 600
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      GAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGCCTTGTTGCTAGAT 660
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      ATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTANATCTTCTTCGGAGAAGAGCA 720
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      GAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAATTTTATAA 780
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      CCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGCTCCCTTTCTTATGTGGCC 840
consensus_13507#1      ------------------------------------------------------------
consensus_13507#2      ------------------------------------------------------------
                                                                                   

consensus_13507#0      TGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACAT-TTGCTTGTTGGGAGAACAGGA 899
consensus_13507#1      --CCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACAT-TTGCTTGTTGGGAGAACAGGA 57
consensus_13507#2      -----------------------GCGACCCCCCCCTACCTTGCCTCCGAAGTAACCGCCG 37
                                               **    *  *  *  **** *     *  * *    

consensus_13507#0      AAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTT 959
consensus_13507#1      AAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTT 117
consensus_13507#2      CCGCCGCGGCAGCTAGGTCACCGAGCCCGGGCCCACCCTCCCCTCCCCTCCCCCACGCCG 97
                         **        **     **   *     * *   *  ** **** *   *  * *   

consensus_13507#0      GATGACTGT-GATGATATAAAATTCA-GATCAGCGTTGC-GCTCTTTCAAACGACGTGTG 1016
consensus_13507#1      GATGACTGT-GATGATATAAAATTCA-GATCAGCGTTGC-GCTCTTTCAAACGACGTGTG 174
consensus_13507#2      GATGATCGCCGCCGGCGCCGCCTCGATGGGCCGCGCCACCGCCACTCCAGCCCACGGGGC 157
                       *****  *  *  *        *  * *  * ***   * **   * **  * *** *  

consensus_13507#0      GCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGC 1076
consensus_13507#1      GCATATGCTAATGCAAACTTCGACCATATGGTTGGGTGGAGAACGTCATCAATCCGTCGC 234
consensus_13507#2      CCATTCGCGGTGGCCCCGCGCCGTCGCGCGCCTCCG-------CCTCGCGTTCCGCTCCC 210
                        ***  **    **      *   *    *  *  *       * **      *  ** *

consensus_13507#0      CAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTC 1136
consensus_13507#1      CAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATATCCTCATATTGTC 294
consensus_13507#2      CGGCGCCCGCGGCCAG--CGGCGGCGCGCGGTGGATAGGCTGCTTCCGCCCGGCGCCACC 268
                       *  *    **  ***   *  ** *     **   *     *      **         *

consensus_13507#0      CATGTTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGATCTT-TATGA 1195
consensus_13507#1      CATGTTGATAAAGGAGCAACGAACAGTAATGAAGCAGAAGCTCGTTCTGATCTT-TATGA 353
consensus_13507#2      GGCGGCGGTGAAGGAG--GCGAAGGGGAAGCGGCCGGAGGTGGAGAAGGAGCCTGCGCGG 326
                          *  * * ******   ****  * **     * ** *        ** * *    * 

consensus_13507#0      CCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAG 1255
consensus_13507#1      CCCAGAAGAGGAGATGATTAGAGGCCTTACACAAGTACCGTGGGAACGTGTTGATGTGAG 413
consensus_13507#2      GGCGGAGGGGAGGACGTGTGGAGCGCGCAGGCGGAGGCCGAGGTGGCGCAG-GGCGGGGG 385
                         * ** * *  ** *  * ***  *  *  *     *** **   **    *  * * *

consensus_13507#0      CTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTG 1315
consensus_13507#1      CTTCCAGAAAAGTAGTCAAAGATTGGTTGCGCATAACACCATCCAGGTGAAGAGCTATTG 473
consensus_13507#2      TTTCC---------------------CCGAGCACCTCGTCGTCATGGTCAATGGCC-TCG 423
                        ****                       * ***   *  * **  *** **  **  * *

consensus_13507#0      GCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTC 1375
consensus_13507#1      GCTAAACTCAGACGGCGCGGACGTTATCAATCACATGATGGATAATTTTATCGTCTAGTC 533
consensus_13507#2      TCGGGAGGTGGTGGATCCG--TGTTACTGTTTGTTT------TTGGTTCATCGCTTTGCT 475
                        *   *    *  *   **   ****    *    *      *   ** ****  * *  

consensus_13507#0      CCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCA 1435
consensus_13507#1      CCTGAACTCTACGTGCTGCACTGTACCAATATTCAGAGAATTTTAGCGATTGGCAATTCA 593
consensus_13507#2      TGTCAGCTCT----GATGCAACCTGCTGGCATTTGG------CTTGCAGTCG-----TAA 520
                         * * ****    * ****   * *    ***  *       * **  * *     * *

consensus_13507#0      ATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCA 1495
consensus_13507#1      ATTTTGCTTAGGTATTTTTTTTCCCTTGTAGGTTACAGTTCTCATAGATAATGTGATTCA 653
consensus_13507#2      AATTAGCCTGGTTGTTTTTTTTTTTTT-----TTGCAGCGCGGATGACTGGAAATTCGCG 575
                       * ** ** * * * ********   **     ** ***  *  **   *         * 

consensus_13507#0      ATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCATTAACTTAGTTAT 1555
consensus_13507#1      ATTATTTAGGTTTCACTCTAAATGTTTCTGATCCCCATTCTTCCCCATTAACTTAGTTAT 713
consensus_13507#2      GCGGAGCAGTTCGTGAGGCGGATGCCGGAAAAAGTGATCGTGCACCGTGAGTACCCCCAA 635
                              ** *          ***      *     **  * * ** * *        * 

consensus_13507#0      CACATCCAAAGTGTATCATAACTTGTACCCTCTACTGTATCAGAGTACAATGAAGCTAAT 1615
consensus_13507#1      CACATCCAAAGTGTATCATAACTTGTACCCAAGACTGTATCAGAGTACAATGAAGCTAAT 773
consensus_13507#2      TCGATCCACAGGCAAATCTATCTCTTGCGGAGTTCAGTTGCTCTCTGAATTGTGG----- 690
                          ***** **   *   ** **  * *      * **  *    *  * **  *     

consensus_13507#0      AGATATTTCCTGTTGAATTGTAAAAAAAAAAAAAAAGG 1653
consensus_13507#1      AGAT----------------CAAAAAAGGA-------- 787
consensus_13507#2      --------------------------------------