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Oryza sativa
cluster # 13514 cluster # 13514       Sequences # 13       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13514#0 length = 3219 sequences # 11  
 consensus_13514#1 length = 809 sequences # 1  
consensus_13514#2 length = 660 sequences # 1  
consensusID : consensus_13514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 3219
fasta sequence 
                              [GCTGTACCACCACCACCGCTGCTAGTGCTCGCGCGCTCTCCTGCTGCTGCTAGAAGCTTCTGGAATCTGGAGCCGAGCCGATGCCATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTTCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTATCCAAGCCCCATCCTTCCCACCTCCCTCCTACCGGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGAAGAAGAAGCAGCAGCAACAAGAGCAGCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCTGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTGGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAG-CCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAG-GCTGAAGGTGATATTCTCCA-AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT-CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAGTACTGTAAAATTCTTGTCCAAAAAAAAAAAA]

[+] EMBL AK067109             [GCTGTACCACCACCACCGCTGCTAGTGCTCGCGCGCTCTCCTGCTGCTGCTAGAAGCTTCTGGAATCTGGAGCCGAGCCGATGCCATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGTCTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTGGTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGGTGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGGCGAGTTTCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCTCGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGAGCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTATCCAAGCCCCATCCTTCCCACCTCCCTCCTACCGGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGAAGAAGAAGCAGCAGCAACAAGAGCAGCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCTGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGAGGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGCTGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCATAAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCTTGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTGGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCAGCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACCTGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCAGCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTATGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGACTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAGCAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTACTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGGAACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAATTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAG CCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAG GCTGAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAA GGGAATTTTGTGGGAATTAAACT                                             ]
[+] EMBL AU032367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            atcgGGCTTGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGATGAGTTGGGTAAAGGTTTGGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTACCAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCAACTTACGAGGAGAAGAGTTTTGACAATGGAGTNGGTATCTGGTGAAAATCCCACAGATTTGCTTTCCTTATCTAAAGGNATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGATCG AGCAACAGCCCGTTTTCTTGACCTGGTCAACAAAGGTGTCGAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK105072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGAGTTTCAGTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAATACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAG CCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAG GCTGAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTT   ATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAA GGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAGTACTGTAA                       ]
[-] EMBL CB627847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GATGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAG CCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAG GCTGAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAGACTGATTTTTGTGAAAGTACTGTAAAATTCTTG               ]
[+] EMBL BI795238             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGACCT  GGCTGTCCAAAGAAGCACCAGCCCTTGGTGACATTCCAGACA CAGTAAGAGATCGCAG GCTGAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTGCTACATTACCACCGCCTGTGCCTCC CCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAaa                              ]
[-] EMBL BU572423             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGCGCCAG CCTTGGTGACATTCCAGACACCAGTAAGAGATCGCAG GCTGAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGATCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTT                                      ]
[+] EMBL BI805200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGCACCAG CCTTGGTGACATTCCAGACAGCAGTAAGAGATCTCAGTGCTGAAGGTGATATTCTCCACAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACC CCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAA GGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAGTACTGTAAAATTCTTGTCCAAAAAAAAAA  ]
[-] EMBL BU673929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGACATTCCAGACACCAGTAAGAGATCGCAG GCTNAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGATCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTT                                      ]
[-] EMBL BU572424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGACATTCCAGACACCAGTAAGAGATCGCAG GCTGAAGGTGATATTCTCCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGATCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTT                                      ]
[+] EMBL CB096251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCA AGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAGTACTGTAAAATTCTTGTC             ]
[+] EMBL AU173824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGT CTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTNTACTATTACAGGCTTCCTTTGAAAA GGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAGTACTGTAAAATTNTTGTCAAAAAAAAAAAAA]




>consensus_13514#0
GCTGTACCACCACCACCGCTGCTAGTGCTCGCGCGCTCTCCTGCTGCTGCTAGAAGCTTC
TGGAATCTGGAGCCGAGCCGATGCCATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGT
CTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTG
GTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGG
TGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGG
CGAGTTTCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCT
CGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGA
GCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTATCCAAGCCCCATCCTTCCCACCTCC
CTCCTACCGGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAA
GCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCA
ACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGAAGAA
GAAGCAGCAGCAACAAGAGCAGCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCC
ATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAA
GTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCC
GGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCA
GATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTT
GATCACAGATGCCACCTACAGCTGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACA
ATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAA
AGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACT
CGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGA
GGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGC
TGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCAT
AAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCT
TGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGA
TGAGTTGGGTAAAGGTTTGGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTAC
CAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCA
ACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTT
GCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGAT
CGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCA
GCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACC
TGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCA
GCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTA
TGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGA
CTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAG
CAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTA
CTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGG
AACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAA
TTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCA
GTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAA
TACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGA
TGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAA
TCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGAC
AGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGT
GCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTT
TAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGA
CCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCG
CAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCATCCTGAT
GGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCA
CCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCC
GCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAA
GTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGC
CATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTG
TCTTCTACTATTACAGGCTTCCTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTT
TGTGAAAGTACTGTAAAATTCTTGTCCAAAAAAAAAAAA

consensusID : consensus_13514#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 809
fasta sequence 
                              [CCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGAAGCATCTCGATTGGGCTCCGTTGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCCAATTGGTAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCCCAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGNAGAAAGATGCA]

[+] EMBL CB627846             [CCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGAAGCATCTCGATTGGGCTCCGTTGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCCAATTGGTAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCCCAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGNAGAAAGATGCA]




>consensus_13514#1
CCAAGCCCCATCCTTCCCACCTCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGA
AGCATCTCGATTGGGCTCCGTTGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCC
AATTGGTAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGT
ATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCAACCTC
AGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGAAGAAGCAGCAGCAACAAG
AGCACCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGC
TGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACT
ATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTT
ACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTG
TCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCT
ACAGCGGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGC
TTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCT
CAACAAGGCCTGATATCCCAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAA
AGGTTCCTCCCTTCCCGNAGAAAGATGCA

consensusID : consensus_13514#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 660
fasta sequence 
                              [ACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCACCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCAAAAAAAAAAAAAAA]

[-] EMBL CA759077             [ACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATTTACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAACGATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTAAGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCCACCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCAAAAAAAAAAAAAAA]




>consensus_13514#2
ACTGCAAATCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTT
GTAATGACAGCGAACGCGAAGTCACTTGCTCGTGACCTGATCTCCAAAGATGCATCGATT
TACCGGGTGCTCTTAAGTCGGGTACTTGCCGATGTCATCTTCCAGTGGATGGTGAAGGCA
ACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGACAGCAGGAAAGAAC
GATGAAGACCTGGGGCTGTCCAAAGAAGCACCAGCCTTGGTGACATTCCAGACAGCAGTA
AGAGATCGCAGGCTGAAGGTGATATTCTCCAAGTTCGTCAGGGACATAAGAGAGGACCCC
ACCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTATCTCGGTGGTCTCCGCTGCAATT
GGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAATTTCTGTCTACATTACCACCGCCT
GTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATATGAAGAGCAGCAACTATGCCTTGG
TGCATGAAGTAACTTTTTTACTGGGTATCCCGTAGCTGTATATAAACGTTTTCAGGAGCA
GAATCAGCCATCCTGTAGCTGACAGTAGCTCGATCAGAGTTCTCCAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13514#0      GCTGTACCACCACCACCGCTGCTAGTGCTCGCGCGCTCTCCTGCTGCTGCTAGAAGCTTC 60
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGGAATCTGGAGCCGAGCCGATGCCATGGCGGCGCTCGTGCGGCCCGCCGTGCTGCCCGT 120
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CTGCGCCATGACGGGCGGCGGCGGTAACGACAAGCGGTCGCCGCCGCAGCAGCGGTCGTG 180
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GTGGGGCGGGAACAAGCAGAGATTGCCGCACCAGCCGCGGCGGCAGCCGGGCGGGAATGG 240
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGGCCGAGGAGGAGGAGGAGGGGCGCTGGACCAGGTGCTCGGAGTGCTCCGCCGCGACGG 300
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CGAGTTTCTCCAGGCGGCAGCCGGCGCCCCCCTCCGCGACATCTTCTGGCTCCGCTTCCT 360
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CGAGAAGAAGAAGCAGCAGCGGCGGCGGAAGCAACCAAAACCTAAACCCAAACCTCCGGA 420
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GCAGCAGCAGCAGCAAGAGGAAGCGGCGGCGGCTATCCAAGCCCCATCCTTCCCACCTCC 480
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CTCCTACCGGCCAGGATTATCATGCCTGGATCTTATGACTGCTGATTTCGAAGCCCTGAA 540
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GCTGTATATCGGCTACTCGAAGCATGCAATCGAGCAGCAATTTCTCAAAGGCAAGCGGCA 600
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      ACCTCAGCATCAGCAAACTCCTAAACCAAAACTCCAGCAACAGCAGCAGCAGCAGAAGAA 660
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GAAGCAGCAGCAACAAGAGCAGCAGAATCAGACACTTCAACCTCCGGCCTTCCCTCCCCC 720
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      ATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGATGATGGCTGATATCGAAGCTCTCAA 780
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GTTGTACATCAACTACTATGTAGCCATTCTCACCACTCCTCTACCCCAGCATTACGATCC 840
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GGAGATACTGTCCCGTTACTTCACCTCGCGTCCTCATATTCTCGCATTTCGCACCATTCA 900
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGATGCAAATTTCTAAAAGAACAAACTT 960
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GATCACAGATGCCACCTACAGCTGTAATAGCACCGGAAGCAAAGGTTTCAATGCTTCACA 1020
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      ATACATGGTTGGCCAGCTTCTCAAAGAGACATTTCTAGATCTTGGGCCTACTTTTGTTAA 1080
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      AGTTGGACAGTCCCTCTCAACAAGGCCTGATATCACAGGCTCGGAGATTTCTGAGGCACT 1140
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGAGAAAAGATGCAATGAAGATTATTGA 1200
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GGGAGAATTTGAGCTCCCTGTATCACACATTTTCAGTTACATTTCTGATGAGCCTGTTGC 1260
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGCAGCTTCCTTTGGACAGGTTTATCAGGGACGTACAGTTGATGGTGCTCTTGTGGCCAT 1320
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      AAAGGTTCAACGGCCTAACCTTCTTCCTTCAGTATTGAGGGACATTTATATTCTACGGCT 1380
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGGGCTTTCTTTTGTGAGGAAGGTAGCAAAGAGGAAAAGCAACATTGCCCTCTATGCTGA 1440
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGAGTTGGGTAAAGGTTTGGTTGGCGAGTTGGACTACAATATTGAAGCTGCTAATGCTAC 1500
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CAAATTCCTGGAATATCATTCCAGATATTCATTTATGCTGGTTCCAAAGGTTCTCAAGCA 1560
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      ACTTACGAGGAGAAGAGTTTTGACAATGGAGTGGGTATCTGGTGAAAATCCCACAGATTT 1620
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GCTTTCCTTATCTAAAGGAATTTCATCAGAAATTGCTGAATCGTCAGAGAAGCAGAAGAT 1680
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CGAAGCAACAGCCCGTCTTCTTGACCTGGTCAACAAAGGTGTCGAAGCATCATTAGTGCA 1740
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GCTCCTCGAGACTGGTTTGTTGCATGCTGATCCTCATCCTGGGAATTTGCGTTATACACC 1800
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGAAGGTCGTGTCGGGTTTCTTGATTTTGGTTTGCTTTGTATGATGGAGAAGAAACATCA 1860
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GCATGCTATGCTTGCAAGTATCGTTCACATAGTAAATGGAGATTGGGCTTCTCTTGTTTA 1920
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGATTTGACTGCAATGGATGTTGTTCCACCAAGAACTAATCTACGCCGAGTGACAATGGA 1980
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CTTGGAGGATGCGTTGGGTGAGGTGACCTTTGAAGATGGAATTCCAGATATCAAGTTTAG 2040
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CAGGGTGCTTGGAAAAATATGGTCTGTGGCATTTAAATACCACTTCCGTATGCCGCCGTA 2100
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      CTACACGCTCGTCCTGAGGTCACTTGCCTCTTTGGAAGGGCTGGCCATTGCAGCAGATGG 2160
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      AACTTTTAAAACATTTCAAGCAGCATATCCATATGTTGTGCGGAAGCTTCTATCGGATAA 2220
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TTCAGTTGCAACAAGGAGACTCTTGCATCAGGCTATTTTCAACAAAAGGAAAGAGTTTCA 2280
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      GTGGAACAAGATTACAGTATTTCTAAAATTAGCATCAGCAAGGGGTAACTTCAGGTATAA 2340
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TACTGGCGTTTTGCCTGAGAGGAAGGGTTTGGATGTTGCAAAACTTGTAGAGATCAGTGA 2400
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      ------------------------------------------------------------
                                                                                   

consensus_13514#0      TGCATCTTCTTCACTCCATCTTAACCGTGCTACACCAGAAAGAGCACTACATACTGCAAA 2460
consensus_13514#2      ----------------------------------------------------ACTGCAAA 8
consensus_13514#1      ---------------------------------------CCAAGCCCCATCCTTCCCACC 21
                                                                               **  

consensus_13514#0      TCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGAC 2520
consensus_13514#2      TCTGTGCTTGCGGCTTTTACTATCGAAGGAGAGCATTGTGATAAGGAGACTTGTAATGAC 68
consensus_13514#1      TCCCTCCTACCAGCCAGGTTTGTCGCCGCGCGGCAGAGAAGCATCTCGATTGGGCTCCGT 81
                       **  * **  * **      * ***  *    ***  *    *    ** * *       

consensus_13514#0      AGCGAACGCGAAGTCACT--TGCTCGTGA-------CCTGATCTCCAAAG-----ATGCA 2566
consensus_13514#2      AGCGAACGCGAAGTCACT--TGCTCGTGA-------CCTGATCTCCAAAG-----ATGCA 114
consensus_13514#1      TGCGCACGCATTGTTCCTGTTGCTGATGGGGATTCTCCCAATTGGTAGGATTATCATGCC 141
                        *** ****   **  **  ****  **        **  **    *        **** 

consensus_13514#0      TCGATTTACCGGGTGCTCTT----AAGTCGGGTACTTGCCGAT-GTCATCTTCCAGTGGA 2621
consensus_13514#2      TCGATTTACCGGGTGCTCTT----AAGTCGGGTACTTGCCGAT-GTCATCTTCCAGTGGA 169
consensus_13514#1      TGGATCTTATGACTGCTGATTTCGAAGCCCTGAAGCTGTATATCGGCTACTCGAAGCATG 201
                       * *** *   *  ****  *    *** *  * *  **   ** * *  **   **    

consensus_13514#0      TGGTGAAG--GCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGAC 2679
consensus_13514#2      TGGTGAAG--GCAACTGGTTTTAAACGAGCCGGACAGCTCGAGCCTCACCCACGCGTGAC 227
consensus_13514#1      CAATCGAGCAGCAATTTCTCAAAGGCAAGC--GGCAACCTCAGCATCAGCAAACTCCTAA 259
                          *  **  **** *  *   *  * ***  * ** *   *** *** * *      * 

consensus_13514#0      AGCAGGAAAGAACGATGAAGACCTGGGGCTGT--CCAAAGAAGCACCAGCCTTGGTGACA 2737
consensus_13514#2      AGCAGGAAAGAACGATGAAGACCTGGGGCTGT--CCAAAGAAGCACCAGCCTTGGTGACA 285
consensus_13514#1      ACCAAAACTCCAGCAACAGCAGAAGAAGCAGCAGCAACAAGAGCACCAGAATCAGACACT 319
                       * **  *    *  *  *  *   *  ** *   * * *  ********  *  *  ** 

consensus_13514#0      T-----TCCAGACAGCAGTAAGAGATCGCAGGCTGAAGG--TGATATTCTCCAAGTTCGT 2790
consensus_13514#2      T-----TCCAGACAGCAGTAAGAGATCGCAGGCTGAAGG--TGATATTCTCCAAGTTCGT 338
consensus_13514#1      TCAACCTCCGGCCTTCCCTCCCCCATCGTACCCTCCAGGGCTGTCTTGTATGGAGCTGAT 379
                       *     *** * *  *  *     **** *  **  ***  **   *      ** *  *

consensus_13514#0      CAGGGACATAAGAGAGGACCCCATCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTAT 2850
consensus_13514#2      CAGGGACATAAGAGAGGACCCCACCCTGATGGTCAGAGTGAGCTGGAACATGTTTGCTAT 398
consensus_13514#1      GATGGCTGATATCGAAGCTCTCAAGTTGTACATCAACTACTATGTAGCCATTCTCACCAC 439
                        * **     *  ** *  * **   **    ***             ***  *  * * 

consensus_13514#0      CTCGGTGGTCTC-CGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAAT 2909
consensus_13514#2      CTCGGTGGTCTC-CGCTGCAATTGGCGTTCACCGTTTCATCGTCGTCTTGTCGGAGGAAT 457
consensus_13514#1      TCCTCTACCCCAGCATTACGATCCGGAGATACTGTCCCGTTA-CTTCACCTCGCGTCCTC 498
                         *  *   *   *  * * **  *     ** **  * *   * **   ***       

consensus_13514#0      TTCTGTCTACATTAC-CACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATA 2968
consensus_13514#2      TTCTGTCTACATTAC-CACCGCCTGTGCCTCCGCCGCGGCTAGTTCAGATTCAGAGCATA 516
consensus_13514#1      ATATTCTCGCATTTCGCACCATTCAGATAATCTTCGCATTTGTCTCGGCTGCAGTAAAGA 558
                        * *     **** * ****           *  ***   *   ** * * ***   * *

consensus_13514#0      TGAAGAGC----AGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCG 3024
consensus_13514#2      TGAAGAGC----AGCAACTATGCCTTGGTGCATGAAGTAACTTTTTTACTGGGTATCCCG 572
consensus_13514#1      TGCAAATTTCTAAAAGAACAAACTTGATCACAGATGCCACCTACAGCGGTAATAGCACCG 618
                       ** * *      *   *  *  * *     **      * **       *       ***

consensus_13514#0      TAGCTGTA--TATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACA-GTAGC 3081
consensus_13514#2      TAGCTGTA--TATAAACGTTTTCAGGAGCAGAATCAGCCATCCTGTAGCTGACA-GTAGC 629
consensus_13514#1      GAAGCAAAGGTTTCAATGCTTCACAATACATGGTTGGCCAGCTTCTCAAAGAGACATTTC 678
                        *     *  * * ** * **       **   *  **** * * *    ** *  *  *

consensus_13514#0      TCGATCAGAGTTCTCCATGGCTAGTTCTCCGTAAATTTGTCTTCTACTATTACAGGCTTC 3141
consensus_13514#2      TCGATCAGAGTTCTCCAAAAAAAAAA----AAAAA------------------------- 660
consensus_13514#1      TAGATCTTGGGCCTACTTTTGTTAAAGTTGGACAGTCCCTCTCAACAAGGCCTGATATCC 738
                       * ****   *  ** *                 *                          

consensus_13514#0      CTTTGAAAAGGGGAATTTTGTGGGAATTAAACTGATTTTTGTGAAAGTACTGTAAAATTC 3201
consensus_13514#2      ------------------------------------------------------------
consensus_13514#1      CAGGCTCGGAGATTTCTGAGGCACTCGCCGAGTTACATGAAAAGGTTCCTCCCTTCCCGN 798
                                                                                   

consensus_13514#0      TTGTCCAAAAAAAAAAAA 3219
consensus_13514#2      ------------------
consensus_13514#1      AGAAAGATGCA------- 809


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)