cluster # 13539

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Oryza sativa
cluster # 13539 cluster # 13539 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13539#0 length = 1782 sequences # 7

consensus_13539#1 length = 1360 sequences # 4
consensus_13539#2 length = 1248 sequences # 2

consensusID : consensus_13539#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1782
fasta sequence

                              [AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT-GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC-TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGATGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATAAAAAAAAAAAAAAAAAACTCGAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGGGCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTGAGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGCCAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG]

[+] EMBL AK062107             [AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGCTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGATGATCTTTCTGGT                                                                                                                                                                                                                                                                             ]
[+] EMBL AK099088             [                      CCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACTATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGATGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATA                                                                                                                                                                                                                                                  ]
[+] EMBL CB677908             [                                             GCGTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB677909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGAAAAGGTTTCTGGTATTTATCCTCCGATTTTGGTTTCT                                                                                                                                                                                                                                                     ]
[+] EMBL CA767578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCATCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGTTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTT                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BE040468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACACAGTGGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTAGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTC TTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTAGTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTAGCCTTCTGAATCTTTCGGCTGCCATTGTGAAGGTGCGTGGTCTACATTAAGATAACCAATTACCTTGGCCCAACTTACCATGTTCTCTGACCAATGAATGGTCCCAACGTCGCTAGGCACAGTG ATGGTGATTAGGACGATATTGCTGGTATGTATCCTCCGATTGTGGTTTCTGAAAAAAAAAAAAAAAAAAACTCGAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGGGCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTGAGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGCCAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG]
[+] EMBL BI808813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAGGAGTCTCCACT GCTAAGGTAACTCGGGATAGCTC AAAATTACT GCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTC AAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCC TTGTGAAGGTGCGTGGTCTACGTTAAGATAACC ATTACCTTGGCCCcaaaaaa                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_13539#0
AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTT
GCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA
CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG
CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG
TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG
CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG
GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC
CCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCG
AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT
CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC
AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG
GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC
CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA
AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG
ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA
GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC
AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG
AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG
GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG
CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT
ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT
AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCT
GCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGG
CTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTAC
CATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGA
TGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATAAAAAAAAAAAAAAAAAACTC
GAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGG
GCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTG
AGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGC
CAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG

consensusID : consensus_13539#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1360
fasta sequence

                              [GTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTG-CGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAAAAAAAAAAAAAAA]

[+] EMBL AF072849             [GTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCTG CGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGGCTGCCATTGTGAAAAAAAAAAAAAAAA]
[+] EMBL CA999423             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AA749875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTCTCATGTCACAGGTCATTAAGGATATCCTCTTGAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAG NCACCAGATTCATCCGGGCCTGAG CTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGC                                                                                                                                                                            ]
[+] EMBL AU093614             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAG TGCCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAAaaaaaaa                            ]




>consensus_13539#1
GTTCTAGGGTTTTGCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCG
GCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAAC
ATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCG
GCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGC
GCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACT
ATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGAC
GCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTAC
GAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTT
GGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACT
CAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGG
ACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAG
CCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTT
GGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGAT
TCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCT
CTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAG
CAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAG
AAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCT
GAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCAC
CCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAA
GCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACAT
ACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCA
AAATGCGTTAGCTGCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTT
CTGAATCTTTCGGCTGCCATTGTGAAAAAAAAAAAAAAAA

consensusID : consensus_13539#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1248
fasta sequence

                              [CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAAAAA]

[+] EMBL AB055495             [CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAAAAA]
[+] EMBL CF306678             [                                                                                                                                                                      GCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTCTGGATATAACTTATTTCANATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_13539#2
CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCACCTCGTCGGCGGCGA
TGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGGCCTCCGACCCGGACG
CCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGGTGCAGCAGGAGAAGC
CCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCGCCCTCGCGCTCCTCA
AGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGGGCCTCATGCAGGGCA
AGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCCCCGTCGAGGGCACCG
AGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCGAGTACTCCACCATCA
ACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACTCACACCCTGGTTATG
GATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATCAGCAATTTCAAGAGC
CATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTGGTAAAGTGGAAATTG
GAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAACCTGTGTCAGAGTATC
AGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCAAACAGTACTATGCTC
TGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTGATCTACTTTGGAATA
AGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACAGGGATTATGTTGCTG
GCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTCAACTGGCACACAGTC
GATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGGAGTCTCCACTGGCTA
AGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATGGTCTCATGTCACAGG
TCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGGCAAGCACAAGCGCAC
CAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCTACAGAATTCCTTCAT
TAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCTAGTTGTTTCATGACT
AAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13539#0      AGATCCCCGAAATCAAACCCCTCCTCTTCTCTTCCCCTTCCTCCTGCGTTCTAGGGTTTT 60
consensus_13539#1      -----------------------------------------------GTTCTAGGGTTTT 13
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      GCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA 120
consensus_13539#1      GCCTCCCAGCGGCGACTCGGCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA 73
consensus_13539#2      ---------------CCGCTCGAGCGAGACCACCGGCAAGCTCGTCGGCGATGGAGCCCA 45
                                      *    ****************************************

consensus_13539#0      CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG 180
consensus_13539#1      CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG 133
consensus_13539#2      CCTCGTCGGCGGCGATGGCGAGGCAGACGTGGGAGCTGGAGAACAACATCCCGGCGGCGG 105
                       ************************************************************

consensus_13539#0      CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG 240
consensus_13539#1      CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG 193
consensus_13539#2      CCTCCGACCCGGACGCCCTGGACGCGATCTACCGCTACGACGAGGCGGCGCAGGCGCGGG 165
                       ************************************************************

consensus_13539#0      TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG 300
consensus_13539#1      TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG 253
consensus_13539#2      TGCAGCAGGAGAAGCCCTGGGCGAACGACCCCCACCCCTTCCGCCGCGCCAAGATCTCCG 225
                       ************************************************************

consensus_13539#0      CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG 360
consensus_13539#1      CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG 313
consensus_13539#2      CCCTCGCGCTCCTCAAGATGGTCGTCCACGCCCGCGCCGGCGGCACTATCGAGGTCATGG 285
                       ************************************************************

consensus_13539#0      GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC 420
consensus_13539#1      GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC 373
consensus_13539#2      GCCTCATGCAGGGCAAGTGCGAGGGCGACGCCATCGTCGTCATGGACGCCTTCGCGCTCC 345
                       ************************************************************

consensus_13539#0      CCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCG 480
consensus_13539#1      CCGTCGAGGGCACCGAGACCAGGGTCAATGCCCAGGCCGACGCCTACGAGTATATGGTCG 433
consensus_13539#2      CCGTCGAGGGCACCGAGACCAGGGTCAACGCCCAGGCCGACGCCTACGAGTATATGGTCG 405
                       **************************** *******************************

consensus_13539#0      AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT 540
consensus_13539#1      AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT 493
consensus_13539#2      AGTACTCCACCATCAACAAGCAGGCTGGAAGGTTGGAGAATGTGGTTGGCTGGTATCACT 465
                       ************************************************************

consensus_13539#0      CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC 600
consensus_13539#1      CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC 553
consensus_13539#2      CACACCCTGGTTATGGATGCTGGTTATCAGGCATTGATGTGTCTACTCAGATGCTTAATC 525
                       ************************************************************

consensus_13539#0      AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG 660
consensus_13539#1      AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG 613
consensus_13539#2      AGCAATTTCAAGAGCCATTCTTGGCTGTTGTGATAGACCCTACAAGGACTGTTTCTGCTG 585
                       ************************************************************

consensus_13539#0      GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC 720
consensus_13539#1      GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC 673
consensus_13539#2      GTAAAGTGGAAATTGGAGCTTTTAGGACATATCCAAAAGATTACAAGCCACCAGATGAAC 645
                       ************************************************************

consensus_13539#0      CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA 780
consensus_13539#1      CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA 733
consensus_13539#2      CTGTGTCAGAGTATCAGACGATACCACTCAACAAGATAGAAGATTTTGGTGTCCACTGCA 705
                       ************************************************************

consensus_13539#0      AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG 840
consensus_13539#1      AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG 793
consensus_13539#2      AACAGTACTATGCTCTGGATATAACTTATTTCAAATCATCCCTGGATTCTCATCTCCTTG 765
                       ************************************************************

consensus_13539#0      ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA 900
consensus_13539#1      ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA 853
consensus_13539#2      ATCTACTTTGGAATAAGTACTGGGTCAATACGTTATCTTCATCACCTCTCCTGGGCAACA 825
                       ************************************************************

consensus_13539#0      GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC 960
consensus_13539#1      GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC 913
consensus_13539#2      GGGATTATGTTGCTGGCCAGATATTTGATTTAGCTGATAAACTAGAGCAAGCTGAGGGTC 885
                       ************************************************************

consensus_13539#0      AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG 1020
consensus_13539#1      AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG 973
consensus_13539#2      AACTGGCACACAGTCGATATGGCATGCTTATGCCATCGCAACGAAAGAAAGAGCAAGAGG 945
                       ************************************************************

consensus_13539#0      AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG 1080
consensus_13539#1      AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG 1033
consensus_13539#2      AGTCTCCACTGGCTAAGGTAACTCGGGATAGCTCAAAAATTACTGCTGAACAGGTCCATG 1005
                       ************************************************************

consensus_13539#0      GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG 1140
consensus_13539#1      GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG 1093
consensus_13539#2      GTCTCATGTCACAGGTCATTAAGGATATCCTCTTCAACTCTGTGCACCCGTCAAACAAGG 1065
                       ************************************************************

consensus_13539#0      CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT 1200
consensus_13539#1      CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT 1153
consensus_13539#2      CAAGCACAAGCGCACCAGATTCATCCGGGCCTGAGCCTATGGTTGAAGCATGAGTGTTCT 1125
                       ************************************************************

consensus_13539#0      ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT 1260
consensus_13539#1      ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT 1213
consensus_13539#2      ACAGAATTCCTTCATTAGTTAGCCTTTTGTTGATGCTGGATTCACATACACTGGGTGCCT 1185
                       ************************************************************

consensus_13539#0      AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCT 1320
consensus_13539#1      AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGCGTTAGCT 1273
consensus_13539#2      AGTTGTTTCATGACTAAAAGCTGTGTCCAGCATAACTACCCGATTCAAAATGAAAAAAAA 1245
                       ****************************************************    *   

consensus_13539#0      GCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGG 1380
consensus_13539#1      GCGTTTTATCGTCAAATCATAACTGATATGTAATTATGAGTTGCCTTCTGAATCTTTCGG 1333
consensus_13539#2      AAA--------------------------------------------------------- 1248
                                                                                   

consensus_13539#0      CTGCCATTGTGAAGGTGCGTGGTCTACGTTAAGATAACCAATTACCTTGGCCCAACTTAC 1440
consensus_13539#1      CTGCCATTGTGAAAAAAAAAAAAAAAA--------------------------------- 1360
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      CATGTTCTCTCAACAATGAATGGTCCCAACGTCGCTAGGCACAGTGTATGTTGATTTGGA 1500
consensus_13539#1      ------------------------------------------------------------
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      TGATCTTTCTGGTATTTATCCTCCGATTTTGGTTTCTATAAAAAAAAAAAAAAAAAACTC 1560
consensus_13539#1      ------------------------------------------------------------
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      GAGGCGGGGCCCGGTGCCCAAATCGGCCTATAGGGAAGTTTATCACCGCGCGCGTCCTGG 1620
consensus_13539#1      ------------------------------------------------------------
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      GCGTGCGGTTAGACTCGTTGGACTGGGAAAAACCCGGCGATGCCCAACTTAGCTCTCGTG 1680
consensus_13539#1      ------------------------------------------------------------
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      AGAAATGACCACCTTGCGCAGTCTGAGTGATAGTGAAGAAGGCCGGCACGTTCGCCCTGC 1740
consensus_13539#1      ------------------------------------------------------------
consensus_13539#2      ------------------------------------------------------------
                                                                                   

consensus_13539#0      CAACGGGTGACCATCTTATATGCGATGGTCCCGCCCAGANCG 1782
consensus_13539#1      ------------------------------------------
consensus_13539#2      ------------------------------------------