cluster # 13546

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Oryza sativa
cluster # 13546 cluster # 13546 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13546#0 length = 1868 sequences # 9
consensus_13546#1 length = 831 sequences # 2

consensus_13546#2 length = 638 sequences # 1
consensus_13546#3 length = 471 sequences # 1

consensusID : consensus_13546#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1868
fasta sequence

                              [CCCTCCACCGCTTCGCGAATCTTCCTCCCCAACCACACGAAAACCAAAAAAAACTCACCTTCACCCTCGCCGTCGCGGCGCCCCCCAAAAAAATTCACCCCTTTTTCCCCACGCTCCGGTGGCTCCACGCCGCCCCGCCCGCCGCCGCGACCACCCGTTCCACCGGCGAATCCGCGGATTTAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGGGATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCA---AGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAGGAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGCATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTTTGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAA-TTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATT-AAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATG-AAAGATGGGTTTTTTTCTTATCTGTAGAAGAACAATCCAATGCCCAATGATTTATCTATCCAAAACAAAAAAGA]

[+] EMBL CB683910             [CCCTCCACCGCTTCGCGAATCTTCCTCCCCAACCACACGAAAACCAAAAAAAACTCACCTTCACCCTCGCCGTCGCGGCGCCCCCCAAAAAAATTCACCCCTTTTTCCCCACGCTCCGGTGGCTCCACGCCGCCCCGCCCGCCGCCGCGACCACCCGTTCCACCGGCGAATCCGCGGATTTAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGGGATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCA   AGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C28354               [     CACCGCTTCG GAATCTTCCTCCCCAACCACACGAAAACCAAAAAAAACTCACCTTCACCCTCGCCGTCGCGG GCCCCCCAAAAAAATTCACCCCTTTTTCCCCACGCTCCGGTGGCTCCACGCCGTCCCGCCCGCCGNCGNGACCACCCGTTCCACCGGCGAATCCGCGGATTTAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGGGATGGTGGGCGACCTCTCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK072841             [                                                                                                    CTTTTTCCCCACGCTCCGGTGGCTCCACGCCGCCCCGCCCGCCGCCGCGACCACCCGTTCCACCGGCGAATCCGCGGATTTAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGGGATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCA   AGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAGGAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGCATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTTTGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAA TTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATT AAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGGATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATG AAAGATGGGTTTTTT                                                           ]
[+] EMBL AK099030             [                                                                                                        TTCCCCACGCTCCGGTGGCTCCACGCCGCCCCGCCCGCCGCCGCGACCACCCGTTCCACCGGCGAATCCGCGGCTTTAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGGGATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCA   AGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAGGAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGCATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTTTGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAA TTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATT AAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACGAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAGGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATG AAAGATGGGTTTTTTTCTTATCTGTAGATGAACAATCCAATGCCCAA                           ]
[+] EMBL CB625689             [                                                                                                                                                                                                                                                     TGGGCGACTTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAG   GCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCAAGCAGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACGGGAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGCATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTTTGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAA TTAGCAAGCACAGCAGTTGATGCTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB677530             [                                                                                                                                                                                                                                                                 CCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCA   AGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAGGAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGCATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTTTGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTTAGC AGCACAGCAGTTGATGCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB658157             [                                                                                                                                                                                                                                                                                                                                                                                 GCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCA   AGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAGGAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGCATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTTTGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAA TTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATTAAAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB683515             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCATGCATCCAATTCAAAA TTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATT AAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAAGATGGGTTTTTTTCTTATCTGTAAAAAAAAAAgg                                     ]
[-] EMBL CB677531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCATGCATCCAATTCAAAA TTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATT AAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATG AAAGATGGGTTTTTTTCTTATCTGTAGAAGAGCAATCCAATGCCCAATGATTTATCTATCCAAAACAAAAAAGA]




>consensus_13546#0
CCCTCCACCGCTTCGCGAATCTTCCTCCCCAACCACACGAAAACCAAAAAAAACTCACCT
TCACCCTCGCCGTCGCGGCGCCCCCCAAAAAAATTCACCCCTTTTTCCCCACGCTCCGGT
GGCTCCACGCCGCCCCGCCCGCCGCCGCGACCACCCGTTCCACCGGCGAATCCGCGGATT
TAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGG
GATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCT
CGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCC
GCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGC
CGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTT
CCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCAAGACTCTCACCCTGA
CTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAA
ATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTAC
GGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTT
ATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTAT
CTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCC
TGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAG
GAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGC
ATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTT
TGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCAC
AGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAA
GCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAG
TGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACT
GAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGG
AACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCC
TATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTG
GGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAA
CTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAG
AGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATT
TACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCA
CTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAA
AATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGAT
GGGTTTTTTTCTTATCTGTAGAAGAACAATCCAATGCCCAATGATTTATCTATCCAAAAC
AAAAAAGA

consensusID : consensus_13546#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 831
fasta sequence

                              [AGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTT--GGTGTATATGAAAGATGGGTTTTTTTCTTATAAGGAGATGAACAATCCAATGCCCAATGATTTATCTCATTAAAGGA]

[-] EMBL CB625690             [AGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTT  GGTGTATATGAAAGATGGGTTTTTTTCTTATAAGGAGATGAACAATCCAATGCCCAATGATTTATCTCATTAAAGGA]
[-] EMBL CB620336             [                            CCAATTCAAAATTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCCCTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATATATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGGAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCCTTTTTAGGGGTAT                                                                      ]




>consensus_13546#1
AGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCACAGCAGTTGAT
GCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGT
AAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTT
TTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCT
GGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTG
GCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCT
ACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAAC
GGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGAC
GAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACT
ATATTGGCAATCACTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCC
CCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTC
TGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAAC
CGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGATGGGTTTTTTT
CTTATAAGGAGATGAACAATCCAATGCCCAATGATTTATCTCATTAAAGGA

consensusID : consensus_13546#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 638
fasta sequence

                              [TTTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTTTATTGGCATCGCTGGAACTGGCTTGGCTGTTTTTTTTTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTTTTTTGGCTTTCCTGGGCAGTAAACGGATTGCGAGACCCAATTTTTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGCCATTTTTTTCAGAGCTATCACTATATTGGCAATCCCTGCTTTTAAGTTTGGGTAAGGGGTTACATATTAATTTCCCTTTTCCCCGACCCCCCTGTAATATATAATCCCCCATTTTGGTTCAGGAGTACAGCACTAGTGCTTTTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGATGGGTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA]

[-] EMBL CB658158             [TTTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTTTATTGGCATCGCTGGAACTGGCTTGGCTGTTTTTTTTTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTTTTTTGGCTTTCCTGGGCAGTAAACGGATTGCGAGACCCAATTTTTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGCCATTTTTTTCAGAGCTATCACTATATTGGCAATCCCTGCTTTTAAGTTTGGGTAAGGGGTTACATATTAATTTCCCTTTTCCCCGACCCCCCTGTAATATATAATCCCCCATTTTGGTTCAGGAGTACAGCACTAGTGCTTTTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGATGGGTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA]




>consensus_13546#2
TTTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGT
CCTGAGATCAGTGAACTGCTGACAAAATGCTTTATTGGCATCGCTGGAACTGGCTTGGCT
GTTTTTTTTTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACG
CGGCTGGTGAACACTGGTGTTGGACTTGGGCTTTTTTGGCTTTCCTGGGCAGTAAACGGA
TTGCGAGACCCAATTTTTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAA
GAGGTTGCAGTCAGAATACAAAAGAGCATGAACGCCATTTTTTTCAGAGCTATCACTATA
TTGGCAATCCCTGCTTTTAAGTTTGGGTAAGGGGTTACATATTAATTTCCCTTTTCCCCG
ACCCCCCTGTAATATATAATCCCCCATTTTGGTTCAGGAGTACAGCACTAGTGCTTTTGT
AGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGT
TGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGATGGGTTTTTTTTTT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA

consensusID : consensus_13546#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 471
fasta sequence

                              [TGGCGACTTGGCTCTTTTGGCTCTCCTGGCAGTACACGGATTGCGAGACACATTTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTCCAGTCAGAATACAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGCAATCACCTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTCCATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGATGGGTTTTTTTCTTATCTGTAGATGAACATCCATGCCCATGATTTATCTATCCAGCAGACAGGTTCCATATTTTAGCTACTTAAAAAA]

[+] EMBL BI813574             [TGGCGACTTGGCTCTTTTGGCTCTCCTGGCAGTACACGGATTGCGAGACACATTTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTCCAGTCAGAATACAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGCAATCACCTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTCCATTGAGCAAATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGATGGGTTTTTTTCTTATCTGTAGATGAACATCCATGCCCATGATTTATCTATCCAGCAGACAGGTTCCATATTTTAGCTACTTAAAAAA]




>consensus_13546#3
TGGCGACTTGGCTCTTTTGGCTCTCCTGGCAGTACACGGATTGCGAGACACATTTACTAG
CATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTCCAGTCAGAATACA
AAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGCAATCACCTGCTTTTAAG
TTTGCGTAAGTGGTTACATACTAATTTACCTTTTCCCCGACCCACCTGTAATATATAATC
CACCATTTTGGTTCAGGAGTACAGCACTAGTGCTTCTGTAGGATTAAGTCCATTGAGCAA
ATGATCCCCGGTAATTTTGTAGAAAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCT
GGCAGCTTGGTGTATATGAAAGATGGGTTTTTTTCTTATCTGTAGATGAACATCCATGCC
CATGATTTATCTATCCAGCAGACAGGTTCCATATTTTAGCTACTTAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13546#0      CCCTCCACCGCTTCGCGAATCTTCCTCCCCAACCACACGAAAACCAAAAAAAACTCACCT 60
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      TCACCCTCGCCGTCGCGGCGCCCCCCAAAAAAATTCACCCCTTTTTCCCCACGCTCCGGT 120
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      GGCTCCACGCCGCCCCGCCCGCCGCCGCGACCACCCGTTCCACCGGCGAATCCGCGGATT 180
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      TAATCTCCCACAGCTCCCCGTGAGATCACAAAGACCGGGCGGGCGTGGGCTGTGGGCTGG 240
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      GATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCT 300
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      CGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCC 360
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      GCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGC 420
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      CGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTT 480
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      CCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCAAGACTCTCACCCTGA 540
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      CTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAA 600
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      ATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTAC 660
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      GGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTT 720
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      ATCAGCTCTTCCAATCAGCATGGCCAGTCAACCATATATCCCTGACGATAAGTTATCTAT 780
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      CTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCC 840
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      TGATCCTCTTGTGGAGTTTTTCCAGTCCCATGGTTCTGCCCTTACCATAGATCAAAACAG 900
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      GAGAATCCTCTTCAATGGAAATGGAGATGATATGAGATATTTACTTTCGATTGTCTTGGC 960
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      ATTCAATATGTCTAAACGAGAAATAAGCAGTTGCAAGACAGCATATCTAGTTCCATATTT 1020
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ------------------------------------------------------------
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      TGAAAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCAC 1080
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      ----------AGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCAC 50
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      AGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAA 1140
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      AGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAA 110
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      GCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAG 1200
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      GCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAG 170
consensus_13546#2      ------------------------------------------------------------
                                                                                   

consensus_13546#0      TGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACT 1260
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      TGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACT 230
consensus_13546#2      -------------TTTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACT 47
                                                                                   

consensus_13546#0      GAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGG 1320
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      GAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGG 290
consensus_13546#2      GAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTTTATTGGCATCGCTGG 107
                                                                                   

consensus_13546#0      AACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCC 1380
consensus_13546#3      ------------------------------------------------------------
consensus_13546#1      AACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCC 350
consensus_13546#2      AACTGGCTTGGCTGTTTTTTTTTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCC 167
                                                                                   

consensus_13546#0      TATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTG 1440
consensus_13546#3      --------------------------------TGGCGACTTGGCTCTTTTGGCTCTCCTG 28
consensus_13546#1      TATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTG 410
consensus_13546#2      TATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTTTTTTGGCTTTCCTG 227
                                                       * *    * **** ******** *****

consensus_13546#0      GGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAA 1500
consensus_13546#3      G-CAGTACACGGATTGCGAGACACATTTACTAGCATATTTAGAAGCCCAGGTGACATGAA 87
consensus_13546#1      GGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAA 470
consensus_13546#2      GGCAGTAAACGGATTGCGAGACCCAATTTTTAGCATATTTAGAAGCCCAGGTGACATGAA 287
                       * ***** ************** ** **  ******************************

consensus_13546#0      CTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAG 1560
consensus_13546#3      CTTGAAGGACGAAGAGGTTCCAGTCAGAATACAAA-GAGCATGAACGACATTCTCTTCAG 146
consensus_13546#1      CTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAG 530
consensus_13546#2      CTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGCCATTTTTTTCAG 347
                       ******************* *************** *********** **** * *****

consensus_13546#0      AGCTATCACTATATTGGCAATCAC-TGCTTTTAAGTTTGCGTAAGTGGTTACATACTAAT 1619
consensus_13546#3      AGCTATCACTATATTG-CAATCACCTGCTTTTAAGTTTGCGTAAGTGGTTACATACTAAT 205
consensus_13546#1      AGCTATCACTATATTGGCAATCAC-TGCTTTTAAGTTTGCGTAAGTGGTTACATACTAAT 589
consensus_13546#2      AGCTATCACTATATTGGCAATCCC-TGCTTTTAAGTTTGGGTAAGGGGTTACATATTAAT 406
                       **************** ***** * ************** ***** ********* ****

consensus_13546#0      TTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGC 1679
consensus_13546#3      TTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGC 265
consensus_13546#1      TTACCTTTTCCCCGACCCACCTGTAATATATAATCCACCATTTTGGTTCAGGAGTACAGC 649
consensus_13546#2      TTCCCTTTTCCCCGACCCCCCTGTAATATATAATCCCCCATTTTGGTTCAGGAGTACAGC 466
                       ** *************** ***************** ***********************

consensus_13546#0      ACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGA 1739
consensus_13546#3      ACTAGTGCTTCTGTAGGATTAAGT--CCATTGAGCAAATGATCCCCGGTAATTTTGTAGA 323
consensus_13546#1      ACTAGTGCTTCTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGA 709
consensus_13546#2      ACTAGTGCTTTTGTAGGATTAAGTGCCAATTGAGCAAATGATCCCCGGTAATTTTGTAGA 526
                       ********** *************  * ********************************

consensus_13546#0      AAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGA 1799
consensus_13546#3      AAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGA 383
consensus_13546#1      AAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGA 769
consensus_13546#2      AAATGAGAAACCGTTGTGAACTGTACAGAATTTTGCTGGCAGCTTGGTGTATATGAAAGA 586
                       ************************************************************

consensus_13546#0      TGGGTTTTTTTCTTATCTGTAGAAGAACAATCCAATGCCCAATGATTTATCTATCCAAAA 1859
consensus_13546#3      TGGGTTTTTTTCTTATCTGTAGATGAACA--TCCATGCCCA-TGATTTATCTATCCAGCA 440
consensus_13546#1      TGGGTTTTTTTCTTATAAGGAGATGAACAATCCAATGCCCAATGATTTATCTCATTAAAG 829
consensus_13546#2      TGGGTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA-------- 638
                       *********** ***     * *  ** *     *     *   *   *           

consensus_13546#0      CAAAAAAGA---------------------- 1868
consensus_13546#3      GACAGGTTCCATATTTTAGCTACTTAAAAAA 471
consensus_13546#1      GA----------------------------- 831
consensus_13546#2      -------------------------------