cluster # 13547

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 13547 cluster # 13547 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13547#0 length = 1596 sequences # 6
consensus_13547#1 length = 1203 sequences # 2

consensus_13547#2 length = 739 sequences # 2
consensus_13547#3 length = 466 sequences # 3

consensusID : consensus_13547#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1596
fasta sequence

                              [AACCCCTCTCGCGGGTTGCGCTTGCGCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGGTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTTTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACAGACTGTAGTCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGGGGAGAGTCAGGAGATGAGCTCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGTCTGGCACCAATATTTACTCCTCCCCGTTCAGCACCTTCAGCTGAACCATATTCTGCTGCAGCACAGGAAGGGTATCAAGAAATTCCAGATGAAAGTTTTGCGCCAGTCCACGTTGTTCCTGCTGTGCAAGGCAATGAAGCTTTTGAGGTGGCTCGTAATAGCGTTGAAC-TTCTTTCCACGGTGC-TTTCTTCTTCT-CCACAAAAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGTTCAGCAATGCCAACAGTGTCAGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTCTTTGAGGCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTCAAGGAACCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAGCCAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGAGTTGACGGTGTAAATTTATCTGATTTCCCTCCTAATAAAAAGA]

[+] EMBL CB668497             [AACCCCTCTCGCGGGTTGCGCTTGCGCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGGTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTTTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACAGACTGTAGTCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGGGGAGAGTCAGGAGATGAGCTCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGTCTGGCACCAATATTTACTCCTCCCCGTTCAGCACCTTCAGCTGAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL OSS12434A            [       CTCGCGGGTTGCGCTTGCNCAGGCGAAGAAGCGCGGCGGACG CAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTNAGCTGGTGTCAGTAACATGAGTTTCAAGNTGNAAGAATTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB661499             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGTCTGGCACCAATATTTACTCCTCCCCGTTCAGCACCTTCAGCTGAACCATATTCTGCTGCAGCACAGGAAGGGTATCAAGAAATTCCAGATGAAAGTTTTGCGCCAGTCCACGTTGTTCCTGCTGTGCAAGGCAATGAAGCTTTTGAGGTGGCTCGTAATAGCGTTGAAC TTCTTTCCACGGTGC TTTCTTCTTCT CCACAAAAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGATCAGCAATGCCAACAGTGTCGGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTCTTTGAGGCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTCAAGGAACCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAGCCAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTTGTCTGGATTAATGTCTTGGGCATGACTA                                                                                                                                                                                                                                      ]
[-] EMBL CB668498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          cgTGAACTTTCTTTCCACGGTGC TTTCTTCTTCT CCACAAAAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGTTCAGCAATGCCAACAGTGTCAGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTCTTTGAGGCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTCAAGGAACCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAGCCAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGGTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTAGAGTTGACGGTGTAAATTTATCTGATTTCCCTCCTAATAAAAAGA]
[+] EMBL AU082609             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACGGTGCTTTTCTTCTTCTCCCACAACAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGTTCAGCAATGCCAACAGTGTCAGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTCTTTGAGGCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTCAAGGAACCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAGCCAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGAaaaaaaa                                    ]
[-] EMBL CB661500             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                C TTTCTTCTTCT CCACAAAAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGTTCAGCAATGCCAACAGTGTCAGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTCTTTGAGGCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTCAAGGAACCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAGCCAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATTTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTTTGACCCCCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGAtt                                         ]




>consensus_13547#0
AACCCCTCTCGCGGGTTGCGCTTGCGCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGC
CCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGT
GAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAAC
ATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGAT
GAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGAT
ATGGGTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATC
ATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAA
AACTGCGAGAAGGCTTTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAA
CTGATCGATGATCCACAGACTGTAGTCAACAACAGAAACAAGGCACTTATGCTTATTGAA
GCATGGGGAGAGTCAGGAGATGAGCTCCGCTACCTTCCGGTGTATGAAGAGACTTACAAG
AGCTTAAGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGTCTGGCACCAATA
TTTACTCCTCCCCGTTCAGCACCTTCAGCTGAACCATATTCTGCTGCAGCACAGGAAGGG
TATCAAGAAATTCCAGATGAAAGTTTTGCGCCAGTCCACGTTGTTCCTGCTGTGCAAGGC
AATGAAGCTTTTGAGGTGGCTCGTAATAGCGTTGAACTTCTTTCCACGGTGCTTTCTTCT
TCTCCACAAAAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGTTCAGCAATGCCAA
CAGTGTCAGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTC
TTTGAGGCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTC
AAGGAACCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAG
CCAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCT
GATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCT
CAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGAT
ACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGA
ATGTATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTAC
AGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCAT
GACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGC
TGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGAGTTGACG
GTGTAAATTTATCTGATTTCCCTCCTAATAAAAAGA

consensusID : consensus_13547#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1203
fasta sequence

                              [GCGTTGGAGTTGGGACCAAAGCGAAGGGAAAGTGGAACAGCGCTCGCGGGTTGCGCTTGCGCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTTTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACAGACTGTAGTCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGGGGAGAGTCAGGAGATGAGCTCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGCATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGATCTGACGGTGTAAATTTATCTGATTTCCCTCCTAATTATACTGCAAAAAAAAAA]

[+] EMBL AK067871             [GCGTTGGAGTTGGGACCAAAGCGAAGGGAAAGTGGAACAGCGCTCGCGGGTTGCGCTTGCGCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTTTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACAGACTGTAGTCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGGGGAGAGTCAGGAGATGAGCTCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGCATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGAT                                                     ]
[+] EMBL BI805117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGATCTGACGGTGTAAATTTATCTGATTTCCCTCCTAATTATACTGCAAAAAAAAAA]




>consensus_13547#1
GCGTTGGAGTTGGGACCAAAGCGAAGGGAAAGTGGAACAGCGCTCGCGGGTTGCGCTTGC
GCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGG
GTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAG
AAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCT
TCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATG
CTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACA
GCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAAT
ATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTTTCTCTGAGA
TTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACAGACTGTAG
TCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGGGGAGAGTCAGGAGATGAGC
TCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCT
TTCCTGGGCGTGATGATGAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCG
AGCAGGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAA
GGGCGGCACCTCATCTCAGCAGGACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTG
ACCACCAGATCCAGATACAGCAGGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATA
TGCCCATCTTGCTTGAATGCATCCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGAC
TAGTTTCTTGCTGTACAGGAATAGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAG
TCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCG
GTGAAGGGTTTGATGCTGAGTTTTTTTATGGTACATTCTACTGCTAGTATATACTACCAG
TATATTTGATCTGACGGTGTAAATTTATCTGATTTCCCTCCTAATTATACTGCAAAAAAA
AAA

consensusID : consensus_13547#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 739
fasta sequence

                              [ACAGCGCTCGCGGGTTGCGCTTGCGCCGGCGAAAAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTNTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACACACGTGAGTCACCAAACAAACCAAGCCCCTTATTCTTATTGAACCTGGGGAAAGCTGGAGAAAGACCCCCTCCCTTTCGGGTGTAAAAAACTTACAAACCTTAAAACAGGGGAATTCCTTTCTGGGCGTAAAAAGAAGCTGCACAAATTTATTCTCCCGTCAACACTTAGTAAACCATTTTGCTGGCCAAGAGGGTTAAAAATCCAAAAATTTTCCCCCCCACCTTCTCCTGGCAACAAAACT]

[+] EMBL AW155381             [ACAGCGCTCGCGGGTTGCGCTTGCGCCGGCGAAAAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTNTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACACACGTGAGTCACCAAACAAACCAAGCCCCTTATTCTTATTGAACCTGGGGAAAGCTGGAGAAAGACCCCCTCCCTTTCGGGTGTAAAAAACTTACAAACCTTAAAACAGGGGAATTCCTTTCTGGGCGTAAAAAGAAGCTGCACAAATTTATTCTCCCGTCAACACTTAGTAAACCATTTTGCTGGCCAAGAGGGTTAAAAATCCAAAAATTTTCCCCCCCACCTTCTCCTGGCAACAAAACT]
[+] EMBL AU062711             [                                                                                                                                                                              GTAACATGAGTTTCAAGATGAAAGAATTCNTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGNTGGAGACCATGGATGNTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCTTTGNGACCNTTGTGAAAAAC                                                                                                                                                                                                                                                                                                                             ]




>consensus_13547#2
ACAGCGCTCGCGGGTTGCGCTTGCGCCGGCGAAAAAGCGCGGCGGACGCCAGATAAAGCC
CTCCCTCCATTGACATCAACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTG
AGCGGCTCAAGGTAAGTGGGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACA
TGAGTTTCAAGATGAAAGAATTCTTCCAAGGCCAGAACATGGCGGACAAGATAGTCGATG
AGGCCACGCTGGAGACCATGGATGCTCCTGATTGGGCCACCAATCTTGAGATATGTGATA
TGGTTAACACTGGAAATGTCAACAGCATTGAGCTGATCCGTGCCATCAAGAGACGCATCA
TGTTGAAGAATCCACGAGTGCAATATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAA
ACTGCGAGAAGGCTNTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAAC
TGATCGATGATCCACACACGTGAGTCACCAAACAAACCAAGCCCCTTATTCTTATTGAAC
CTGGGGAAAGCTGGAGAAAGACCCCCTCCCTTTCGGGTGTAAAAAACTTACAAACCTTAA
AACAGGGGAATTCCTTTCTGGGCGTAAAAAGAAGCTGCACAAATTTATTCTCCCGTCAAC
ACTTAGTAAACCATTTTGCTGGCCAAGAGGGTTAAAAATCCAAAAATTTTCCCCCCCACC
TTCTCCTGGCAACAAAACT

consensusID : consensus_13547#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 466
fasta sequence

                              [TAGGGAAGCGACAGGTTCTGGTGCTGATGATGGCTGTCAGGATCTTGACGACATGATATTTGGCAAGAATGGGCGCACCTCATCTTCAGCAGGACAGGAAGGA-ACCTAAAGGACGATTTCATCAGTGTTCTGACCGACAGATGCCAGATAGCAGCAGGCC-CAGGGGAGACATGTGATATGGATTTGTGTGATATGCCCATCGTGCTTGAATGTATCCCAGGGATTTTGGTTTGGGTTTAATGTCTGTGGGCATGATCTAGTTTCTTGCTGTACACGGAATAGATAGAT-GTAG-CAGT-CCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTC-ATGACTACTATC-AGTGTCAGAGGTTTCATTACTTACTGTACGCTCGGTGAAGGGTTTGAT-GCTGAGGCTTTTATATTGGCATGACTAGGTGCTGATTTTT-GCGAATACATATAAGATTGGTATCAAAAAAAAAA]

[+] EMBL BI810526             [TAGGGAAGCGACAGGTTCTGGTGCTGATGATGGCTGTCAGGATCTTGACGACATGATATTTGGCAAGAATGGGCGCACCTCATCTTCAGCAGGACAGGAAGGA ACCTAAAGGACGATTTCATCAGTGTTCTGACCGACAGATGCCAGATAGCAGCAGGCC CAGGGGAGACATGTGATATGGATTTGTGTGATATGCCCATCGTGCTTGAATGTATCCCAGGGATTTTGGTTTGGGTTTAATGTCTGTGGGCATGATCTAGTTTCTTGCTGTACACGGAATAGATAGATGGTAGCCCCTGCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTC ATGACTACTATC AGTGTCAGAGGTTTCATTACTTACTGTACGCTCGGTGAAGGGTTTGAT GCTGAGGCTTTTATATTGGCATGACTAGGTGCTGATTTTTGGCGAATACATATAAGATTGGT             ]
[+] EMBL BI807783             [                                                     TGATATTTGGCAAGAA  GGCGCACCTCATC TCAGCAGG CAGGAAGGATACACAAAGGACGATTTCATCAGT TTCTGACC ACAGAT CCAGATA CAGCAGGCCGCA GGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTATCCCAGGGATTTT GTTT GGTTTAATGTCT TGGGCATGA CTAGTTTCTTGCTGTACA GGAATAGATAGAT GTAG CAGT CCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTC ATGACTACTATC AGTGTCAGAGGTTTCATTACTTACTGTACGCTCGGTGAAGGGTTTGAT GCTGAGGCTTTTATATTGGCATGACTAGGTGCTGATTTTT GCGAATACATATAAGATTGGTATCAAAAAAAAAA]
[+] EMBL BI809488             [                                                                                                                                                                                                                                                                                       AATAGATAGAT GTAC AAGT CCCCCGTACTGTGTCAAGCCAGTCAGATTTTGGCTCAATGACTACTATCAAGTGTCAGAGGTTTCATTACTTACTGTACGCTCGGTGAAGGGTTTGATCGCTGAGGCTTTTATATTGGCATGACTAGGTGCTGATTTTT GCGAATACATATAAGATTGGTATCAAAAAAA   ]




>consensus_13547#3
TAGGGAAGCGACAGGTTCTGGTGCTGATGATGGCTGTCAGGATCTTGACGACATGATATT
TGGCAAGAATGGGCGCACCTCATCTTCAGCAGGACAGGAAGGAACCTAAAGGACGATTTC
ATCAGTGTTCTGACCGACAGATGCCAGATAGCAGCAGGCCCAGGGGAGACATGTGATATG
GATTTGTGTGATATGCCCATCGTGCTTGAATGTATCCCAGGGATTTTGGTTTGGGTTTAA
TGTCTGTGGGCATGATCTAGTTTCTTGCTGTACACGGAATAGATAGATGTAGCAGTCCCC
CTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAGGTTTCA
TTACTTACTGTACGCTCGGTGAAGGGTTTGATGCTGAGGCTTTTATATTGGCATGACTAG
GTGCTGATTTTTGCGAATACATATAAGATTGGTATCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13547#1      GCGTTGGAGTTGGGACCAAAGCGAAGGGAAAGTGGAACAGCGCTCGCGGGTTGCGCTTGC 60
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      GCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATCAACATGG 120
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      GTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGTGGGGCAG 180
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      AAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAAAGAATTCT 240
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      TCCAAGGCCAGAACATGGCGGACAAGATAGTCGATGAGGCCACGCTGGAGACCATGGATG 300
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      CTCCTGATTGGGCCACCAATCTTGAGATATGTGATATGGTTAACACTGGAAATGTCAACA 360
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      GCATTGAGCTGATCCGTGCCATCAAGAGACGCATCATGTTGAAGAATCCACGAGTGCAAT 420
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ATCTTGCTCTTGTCCTCCTTGAGACCGTTGTGAAAAACTGCGAGAAGGCTTTCTCTGAGA 480
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      TTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGATCGATGATCCACAGACTGTAG 540
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      TCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGGGGAGAGTCAGGAGATGAGC 600
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------------------------
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      TCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTAAGATCAAGGGGAATTCGCT 660
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      ------------------------------------------AACCCCTCTCGCGGGTTG 18
consensus_13547#2      -------------------------------------------ACAGCGCTCGCGGGTTG 17
                                                                                   

consensus_13547#1      TTCCTGGGCGTGATGATGAGAGAACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCG 720
consensus_13547#3      --------------------------------------------------TAGGGAAGCG 10
consensus_13547#0      CGCTTGCGCCGGCGAAGAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATC 78
consensus_13547#2      CGCTTGCGCCGGCGAAAAAGCGCGGCGGACGCCAGATAAAGCCCTCCCTCCATTGACATC 77
                                                                          *  **    

consensus_13547#1      AGCA-GGTTCTGGTGCTGATGAGTTGCTTCAGGATCTTGACGACATGATATTTGGCAAGA 779
consensus_13547#3      A-CA-GGTTCTGGTGCTGATGATGGCTGTCAGGATCTTGACGACATGATATTTGGCAAGA 68
consensus_13547#0      AACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGT 138
consensus_13547#2      AACATGGGTGACAATCTGATGGATAAGGTCAATGCCTTGGGTGAGCGGCTCAAGGTAAGT 137
                       * ** ** *      ******       ***    ****       *      ** *** 

consensus_13547#1      AGGGCGGCACCTCATCT-CAGCAGGACAGGAAGGAACA-AAAGGACGATTTCATCA---- 833
consensus_13547#3      ATGGGCGCACCTCATCTTCAGCAGGACAGGAAGGAACCTAAAGGACGATTTCATCA---- 124
consensus_13547#0      G-GGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAA 197
consensus_13547#2      G-GGGCAGAAGTTAGCCGGAAGATGTCAGCTGGTGTCAGTAACATGAGTTTCAAGATGAA 196
                         **    *  * * *   *  * * ***   *   *   **      *****  *    

consensus_13547#1      -GT-TTCT-----GACCACCAGAT-CCAGATA-CAGCAGGGCCGCAGGGAGACACTTGA- 883
consensus_13547#3      -GTGTTCT-----GACCGACAGATGCCAGATAGCAGCAGGCCCA-GGGGAGACATGTGA- 176
consensus_13547#0      AGAATTCTTCCAAGGCCAGAACATGGCGGACA--AGATAGTCGATGAGGCCACGCTGGAG 255
consensus_13547#2      AGAATTCTTCCAAGGCCAGAACATGGCGGACA--AGATAGTCGATGAGGCCACGCTGGAG 254
                        *  ****     * **   * **  * ** *  **   * *     **  **    ** 

consensus_13547#1      --TATGGATTTGTGTGATATGCCCATCTTGCTTGAATGCATCCCAGGGATTTTGTTT--G 939
consensus_13547#3      --TATGGATTTGTGTGATATGCCCATCGTGCTTGAATGTATCCCAGGGATTTTGGTTTGG 234
consensus_13547#0      ACCATGGATGCTCCTGATTGGGCCACCAATCTTGAG-ATATGTGATATGGGTAACACTGG 314
consensus_13547#2      ACCATGGATGCTCCTGATTGGGCCACCAATCTTGAG-ATATGTGATATGGTTAACACTGG 313
                          ******     ****  * *** *   *****    **   *      *       *

consensus_13547#1      GTTTAATGTCT-TGGGCATGA-CTAGTTTCTTGCTGTACA-GGAATAGATAGATGTAGCA 996
consensus_13547#3      GTTTAATGTCTGTGGGCATGATCTAGTTTCTTGCTGTACACGGAATAGATAGATGTAGCA 294
consensus_13547#0      A---AATGTCAACAGCATTGAGCTGATC-CGTGCCAT-CAAGAGACGCATC-ATGTTGAA 368
consensus_13547#2      A---AATGTCAACAGCATTGAGCTGATC-CGTGCCAT-CAAGAGACGCATC-ATGTTGAA 367
                           ******    *   *** **  *  * ***  * ** *  *   **  **** * *

consensus_13547#1      GTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAG 1056
consensus_13547#3      GTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTACTATCAGTGTCAGAG 354
consensus_13547#0      GAATCCACGAGTGCAATATCTTGCTCTTGTCCTC-CTTGAGACCGTTGTGAAAAACTGCG 427
consensus_13547#2      GAATCCACGAGTGCAATATCTTGCTCTTGTCCTC-CTTGAGACCGTTGTGAAAAACTGCG 426
                       *   **   * **    *      **   *  *  **   ***   * * *    * * *

consensus_13547#1      GTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAG--TTTTTTTATGGTAC 1114
consensus_13547#3      GTTTCATTACTTACTGTACGCTCGGTGAAGGGTTTGATGCTGAGGCTTTTATATTGGCAT 414
consensus_13547#0      AGAAGGCTTTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGAT-C 486
consensus_13547#2      AGAAGGCTNTCTCTGAGATTGCTGCTGAGCGGGTCCTTGATGAGATGGTAAAACTGAT-C 485
                              *   *     *     * ***  ** *   ** ****    *     **    

consensus_13547#1      ATTCTACTGCTAGTATATACTACCAG-TATATTTGATCTGACGGTGTAAATTTATCTGAT 1173
consensus_13547#3      GACTAGGTGCTGATTTTTGCGAATA--CATATAAGAT-TGGTATCAAAAAAAAAA----- 466
consensus_13547#0      GATGATCCACAGACTGTAGTCAACAACAGAAACAAGGCACTTATGCTTATTGAAGCATGG 546
consensus_13547#2      GATGATCCACACACGTGAGTCACCAAACAAACCAAGCCCCTTATTCTTATTGAA-CCTGG 544
                                *           *  *     *                 *    *      

consensus_13547#1      TTCCCTCCTAATTATACTGCAAAAAAAAAA------------------------------ 1203
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      GGAGAGTCAGGAGATGAGCTCCGCTACCTTCCGGTGTATGAAGAGACTTACAAGAGCTTA 606
consensus_13547#2      GGAAAGCT-GGAGAAAGACCCCCTCCCTTTCGGGTGTA---AAAAACTTACAA-ACCTTA 599
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      AGATCAAGGGGAATTCGCTTTCCTGGGCGTGATGATGAGAGTCTGGCACCAATATTTACT 666
consensus_13547#2      AAAC--AGGGGAATTC--CTTTCTGGGCGTAAAAAGAAG----CTGCACAAA--TTTATT 649
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      CCTCCCCGTTCAGCACCTTCAGCTGAACCATATTCTGCTGCAGCACAGGAAGGGTATCAA 726
consensus_13547#2      CTCCCG---TCAACACTT---AGTAAACCA--TTTTGCTG--GC-CAAGAGGGTTA---- 694
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      GAAATTCCAGATGAAAGTTTTGCGCCAGTCCACGTTGTTCCTGCTGTGCAAGGCAATGAA 786
consensus_13547#2      -AAAATCCA----AAAATTTTCCCCC---CCACCTTCTCCTGGCAACAAAACT------- 739
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      GCTTTTGAGGTGGCTCGTAATAGCGTTGAACTTCTTTCCACGGTGCTTTCTTCTTCTCCA 846
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      CAAAAAGAGGCTCTCAAGGATGACCTGACTACCACCCTGGTTCAGCAATGCCAACAGTGT 906
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      CAGCGCACCATCCAGAGAATCATTGAGACGGCTGGTGACAACGAGGCTCAGCTCTTTGAG 966
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      GCATTGAGTGTCCACGATGAACTTGAGAAGGTTCTCTCCAAGTATAAAGAACTCAAGGAA 1026
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      CCTGTTGTTGCAGAGCCTGAGGCAGAGCCAGCCATGATTCCAGTCACCGTGGAGCCAGAG 1086
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      AACTCCCCCCGCACTAAAGATGGCACTGTAGGGAAGCGAGCAGGTTCTGGTGCTGATGAG 1146
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      TTGCTTCAGGATCTTGACGACATGATATTTGGCAAGAAGGGCGGCACCTCATCTCAGCAG 1206
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      GACAGGAAGGAACAAAAGGACGATTTCATCAGTTTCTGACCACCAGATCCAGATACAGCA 1266
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      GGGCCGCAGGGAGACACTTGATATGGATTTGTGTGATATGCCCATCTTGCTTGAATGTAT 1326
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      CCCAGGGATTTTGTTTGGTTTAATGTCTTGGGCATGACTAGTTTCTTGCTGTACAGGAAT 1386
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      AGATAGATGTAGCAGTCCCCCTTACTGTGTCAAGCCAGTCAGATTTTGGCTCATGACTAC 1446
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      TATCAGTGTCAGAGGTTTCATTACTTGCTGTACGCTCGGTGAAGGGTTTGATGCTGAGTT 1506
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------------------------------------
consensus_13547#3      ------------------------------------------------------------
consensus_13547#0      TTTTTATGGTACATTCTACTGCTAGTATATACTACCAGTATATTTGAGTTGACGGTGTAA 1566
consensus_13547#2      ------------------------------------------------------------
                                                                                   

consensus_13547#1      ------------------------------
consensus_13547#3      ------------------------------
consensus_13547#0      ATTTATCTGATTTCCCTCCTAATAAAAAGA 1596
consensus_13547#2      ------------------------------