|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13548#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1337 fasta sequence
[AGAGAGACACAAGCCAACCTGNAACTCG-AAGCAG-AGCAAACGCG-AAGCAG-A-GCAAGCGCCATGG-ACGCCG-AG-ATGGCCATGGGCGAG-AGCTTCGCCTACTACTGGGAGACGCAGCGCTACCTT-G-AGTCCGAGG-AGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAGTCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGGGACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGCGGCGGCGGCGGCGGTGGCGACGACGCCGGTGGCGCGAACAAGAACATCCTCATGGAGCGCGACCGCCGCCGCAAGCTCAACGAGAAGCTCTACGCGCTCCGCAGTGTCGTGCCCAACATCACCAAGATGGACAAGGCGTCGATCATCAAGGACGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCGCCGCCGCGGCGAGCGCCGCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCACCACCACCCCTCGTCGTCG-TCGG-AGCGGACGAAGAAGGTGAAGCGGGCGCT-GTCCGTGTCGTCCATCAGCGACGCCCTGCTCGCCGCGGCGGCGCC-GGCGCCGCCGGTGGAGATCCAGGAGCTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTGAGCGTGACGTGCAGCAAGCGCCGC-GACGCCATGGCCCGGGTGTGCCGCGCCCTCGAGGAGCTCCGCCTCCGCGTCATCACCGCCAACATCACCTCCGTCGCCGGCTGCCTCATGCACACCCTCTTCGTCGAGGTAGATCACATGGATAGTGTCCAAATGAAGCAGATGGTGGAGGCTGCTCTCTCCCAGCTTGTGGCGACCGGCAGTCCGTTGAGCTCCATGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCATGCG-TTTTGGCCACCTACTTTACCTAGTCTCATTCGCAATAAAGCGCATTTTTATGTATGCTTGGTGATGTTGTTGTTGTCATTTTTGCGACACCCCACTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCAACGATTTAGTGGCTGGATGATAGATTTAAGTATTTTGGAAATTTTGAGTACGCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAGGTGGTCCAGCTTAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU095140 [AGAGAGACACAAGCCAACCTCGAACTCG AAGCAG AGCAAACGCG AA CAG ATGCAAGCGCCATGG ACGCCG AG ATGGCCATGGGCGAG AGCTTCGCCTACTACTGGGAGACGCAGCGCTACCTT G AGTCCGAGG AGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAGTCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGGGACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGNGGCGGCGGCGGCGGTGGCGACGACGCGGTTNGCGCGAACAAGAACATCCTCATG ]
[+] EMBL AB040744 [ AGACACAAGCCAACCTCGAACTCG AAGCAG AGCAAACGCG AAGCAG A GCAAGCGCCATGG ACGCCG AG ATGGCCATGGGCGAG AGCTTCGCCTACTACTGGGAGACGCAGCGCTACCTT G AGTCCGAGG AGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAGTCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGGGACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGCGGCGGCGGCGGCGGTGGCGACGACGCCGGTGGCGCGAACAAGAACATCCTCATGGAGCGCGACCGCCGCCGCAAGCTCAACGAGAAGCTCTACGCGCTCCGCAGTGTCGTGCCCAACATCACCAAGATGGACAAGGCGTCGATCATCAAGGACGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCGCCGCCGCGGCGAGCGCCGCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCACCACCACCCCTCGTCGTCG TCGG AGCGGACGAAGAAGGTGAAGCGGGCGCT GTCCGTGTCGTCCATCAGCGACGCCCTGCTCGCCGCGGCGGCGCC GGCGCCGCCGGTGGAGATCCAGGAGCTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTGAGCGTGACGTGCAGCAAGCGCCGC GACGCCATGGCCCGGGTGTGCCGCGCCCTCGAGGAGCTCCGCCTCCGCGTCATCACCGCCAACATCACCTCCGTCGCCGGCTGCCCCATGCACACCCTCTTCGTCGAGGTAGATCACATGGATAGTGTCCAAATGAAGCAGATGGTGGAGGCTGCTCTCTCCCAGCTTGTGGCGACCGGCAGTCCGTTGAGCTCCATGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCATGCGTTTTTGGGCACCTACTTTACCTAGTCTCATTCGCAATAAAGCGCATTTTTATGTATGCTTGGTGATGTTGTTGTTGTCATTTTTGCGACACCCCACTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCAACGATTTAGTGGCTGGATGATAGATTTAAGTATTTTGGAAATTTTGAGTACGCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAGGTGGTCCAGCTTAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU173901 [ GNAACTCGNAAGCAGNAGCAAACGCG AAGCAG A GCAAGCGCCATGGNACGCCGNAGAATGGCCATGGGCGAGAAGCTTCGCCTACTACTGGGAGACGCAGCGCTACCTTGG AGTCCGAGGNAGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAGTCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGGGACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGCGGCGGCGGCGGCGGTGGCGACGACGCCGGTGGCGCGAACAAGAACATCCTCATGGAGCGCGACCGCCGCCGCAAGCTCAACGAGAAGCTCTACGCGCTCCGCAGTGTCGTGCCCAACATCACCAAGATGGACAAGGCGTCGATCATCAAGGACGCG ]
[+] EMBL AU183245 [ cGNAACTCGNAANCAGNANCAAACGCG AAGCAGAA GCAAGCGCCATGGNACGCCG AA ATGGCCATGGGCGAG AGCTTCGCCTACTACTGGGAAACGCAGCGCTACCTT GNAGTCCGAGGNAGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAGTCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGGGACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGCGGCGGCGGCGGCGGTGGCGACGACGCCGGTGGCGCGAACAAGAACATCCTCATGGAGCGCGACCGCCGCCGCAAGCTCAACGAGAAGCTCTACGCGCTCCGCAGTGTCGTGCCCAACATCACCAAGATGGACAAGGCGTCGATCATCAAGGACGCGATCG ]
[+] EMBL AU183248 [ cGNAACTCGNAANCAGNAGCAAACGCGNAAGCAGNA GCAAGCGCCATGGNACGCCG AGAATGGCCATGGGCGAG AGCTTCGCCTACTACTGGGAAACGCAGCGCTACCTTGG AGTCCGAGG AGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAGTCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGGGACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGCGGCGGCGGCGGCGGTGGCGACGACGCCGGTGGCGCGAACAAGAACATCCTCATGGAGCGCGACCGCCGNCGCAAGCTCAACGAGAAGCTCTACG ]
[+] EMBL BI806589 [ accCCCCCACCCCTCGTCTTCGTTCGGAACCGGACGAAGAA GTGAAACCGGCGCTGGTCCGTGTCGTCCATCA CGACGCCCTGCTCGCCGCGGCGGCGCCGGGCGCCGCC GTGGAGATCCAGGAGCTGCGC TTTCGGAGGTGGGCGACAGGGTGCTGGT GTGAGCGTGACGTGCAGCAAGCGCCGCTGACGCCATGGCCCGGGTGTGCCGCGCCCTCGAGGAGCTCCGCCTCCGCGTCATCACCGCCAACATCACCTCCGTCGCCGGCTGCCTCATGCACACCCTCTTCGTCGAGGTAGATCACATGGATAGTGTCCCAATGAAGCAGATGGTGGAGGCTGCTCTCTCCCAGCTTGTGGCGACCGGCAGTCCGTTGAGCTCCATGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCATGCG TTTTGGCCACCTACTTTACCTAGTCTCATTCGCAATAAAGCGCATTTTTATGTAaaaaaaaaa ]
[+] EMBL AU030787 [ CGGGCGCT GTCCGTGTCGTCCATCAGCGACGCCCTGCTCGCCGC GC GCNCC GCGCCGCCGGTGGAGATCCAGGA CTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTGAGCGTGACGTGCAGCAAGCGCCGC GACGCCATGGCCCGGGTGTGCCGCGCCCTCGAGGA CTCCGCCTCCGCGTCATCACCGCCAACATCACCTCCGTCGCCGGCTGCCTCATGCACACCCTCTTCGTCGAGGTAGATCACATGGATAGTGTCCAAATGAAGCAGATGGTGGAGGCTGCTCTCTCCCAGCTTGTGGCGACCGGCAGTCCGTTGAGCTCCATGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCATGCG TTTTGGCCACCTACTTTACCTAGTCTCATTCGCAATAAAGCGCATTTTTATGTATGCTTGGTGATGTTGTTGTTGTCATTTTTGCGACACNNCNCTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCAACGATTTAGTGGCTGGATGATAGATTTAAGTATTTTGGAAATCTTGAGTACGCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAGGTGGTCCAGCTTAATGAAAAAAA ]
[+] EMBL BF889463 [ CCTCTTCGTCGAGGTAGATCACATGGATAGTGTCCAAATGAAGCAGATGGTGGAGGCTGCTCTCTCCCAGCTTGTGGCGACCGGCAGTCCGTTGAGCTCCATGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCATGCG TTTTGGCCACCTACTTTACCTAGTCTCATTCGCAATAAAGTGCATTTTTATGTATGCTTGGTGATGTTGTTGTTGTCATTTTTGCGACACCCCACTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCAACCATTTAATGGCTGGATGATAGATTTAAGTATTTTGGAAA ]
consensusID : consensus_13548#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 845 fasta sequence
[AAGGTAAGGGAGAGAGGAGTAGAGGTGTTCGTCCATGGCGGCGACGGCGACATTGCTGACTGACTGCTCGTCGGTGGTTGGGCGCAGATGGACAAGGCGTCGATCATCAAGGACGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCGCCGCCGCGGCGAGCGCCGCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCACCACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTGTCGTCCATCAGCGACGCCCTGTTTTNTCCCGCGTNNNNTNNNNNNNNNNTNNNNTNTNTTNTNTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTCCCTTTTTTTCTTTTTTTTTTTTTTNTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTNTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTNTTTTTTTTNTTTTTTTTTTTCTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTNTNNTTTTNTTTTNTTTTTTTTTTTTTTNTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTCTCTTCTAAT]
[+] EMBL AW155256 [AAGGTAAGGGAGAGAGGAGTAGAGGTGTTCGTCCATGGCGGCGACGGCGACATTGCTGACTGACTGCTCGTCGGTGGTTGGGCGCAGATGGACAAGGCGTCGATCATCAAGGACGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCGCCGCCGCGGCGAGCGCCGCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCACCACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTGTCGTCCATCAGCGACGCCCTGTTTTNTCCCGCGTNNNNTNNNNNNNNNNTNNNNTNTNTTNTNTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTCCCTTTTTTTCTTTTTTTTTTTTTTNTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTTNTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTNTTTTTTTTNTTTTTTTTTTTCTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTNTNNTTTTNTTTTNTTTTTTTTTTTTTTNTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTCTCTTCTAAT]
consensusID : consensus_13548#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 646 fasta sequence
[GGTGAACGNCCTGTCCGGTCGTCCATCAACGACCCCNTGTTNCCCTCGCGGCCCGCCCCCCCCGTGGGAGATCCAGGACTTGCGCTTTCGGAGGTGCCCACCAGGGTCTGGTGGTGAGCTGAGTCCAGCAAGCGCCGCGACCCATGCCCGGGTGTCCGCGCCCTCGAGGAGCTCCCCTCCGCGTCATCACCGCCCACATTCACCTCCGTCGCCGGCTGCCTCATGCACCCCCTNTTCGTCGAGGTAGATCCCCTGGATAGTGTCCCAATGAA-CCGATGGTGGAGGCTGCTCTCTCCCCGCTTGTGGCGACC-GCNGTCCCTTGAGCTCCCTGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCACTGCNTTTTGGCCNCCTACTTTACCTAGTCTCACTTCNCCATAAAGCGCCTTTTTATGTATGCTTGGTGATGTTGTTGTTGTCCNTTTTGCGACCCCCCCCTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCCACGATTTAGTGGCTGGATGATAGATTTAAGTATTTTGGAAATCTTGAGTACCCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAGGTGGTCCCGCTTAATGAAAACGAAAATGTGTGAATTACCTCTNTGAAAAA]
[+] EMBL BI806310 [GGTGAACGNCCTGTCCGGTCGTCCATCAACGACCCCNTGTTNCCCTCGCGGCCCGCCCCCCCCGTGGGAGATCCAGGACTTGCGCTTTCGGAGGTGCCCACCAGGGTCTGGTGGTGAGCTGAGTCCAGCAAGCGCCGCGACCCATGCCCGGGTGTCCGCGCCCTCGAGGAGCTCCCCTCCGCGTCATCACCGCCCACATTCACCTCCGTCGCCGGCTGCCTCATGCACCCCCTNTTCGTCGAGGTAGATCCCCTGGATAGTGTCCCAATGAA CCGATGGTGGAGGCTGCTCTCTCCCCGCTTGTGGCGACC GCNGTCCCTTGAGCTCCCTGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCACTGCNTTTTGGCCNCCTACTTTACCTAGTCTCACTTCNCCATAAAGCGCCTTTTTATGTATGCTTGGTGATGTTGTTGTTGTCCNTTTTGCGACCCCCCCCTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCCACGATTTAGTGGCTGGATGATAGATTTAAGTATTTTGGAAATCTTGAGTACCCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAGGTGGTCCCGCTTA ]
[+] EMBL AU173902 [ CGCCGGCTGCCTCATGCACACCCTNTTCGTCGAGGTAGATCACATGGATAGTGTCCNAATGAAGCAGATGGTGGAGGCTGCTCTCTCCCAGCTTGTGGCGACCGGCAGTCCGTTGAGCTCCATGAGCTATTAGTTATGAGCTGGATAGATATATGGAGTCA TGCGTTTTGGCCACCTACTTTACCTAGTNTCA TTCGCAATAAAGCGCATTTTTATGTATGCTTGGTGATGTTGTTGTTGTCATTTTTGCGACNCCCCNCTACGTGATGGAGGTGGTTGTTTTCTTGCGAGGCAACGATTTAGTGGCTGGATGATAGATTTAAGTATTTTGGAAATCTTGAGTACGCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAGGTGGTCCAGCTTAATGAAAACGAAAATGTGTGAATTACCTCTNTGAAAAA]
consensusID : consensus_13548#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 585 fasta sequence
[GNNGCGCGGNGTGGNAAAACCCGGGGNNGGAAAAGAANNTCTTATGNGGGGCCCNCCCCCGCANTTTAAAGAGAAGTTTNAACGGTTTCGCAAGNTTTGGNCCCCAAACNTCACCAAAGTNAAGGGAGAGAGGAGTAGAGGTNTTNNTCCATGGCGGGGACGGNGAAAATNGCTGNATGATTGTTGTCGGTGGTTGGGCGCAAGATGGACAAGGCTTCAATCATCAAGGANGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCCGCCGCCGCGGCGAGCGCCGCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCACCACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTGTCGTCCATCAGCGACGCCCTGCTCGCCGCGGCGGCGCCGGCGCCGCCGGTGGAGATCCAGGAGCTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTGAGCGTGACGTGCAGCAAGCGCCGCGACGCCATGGCCCGGGT]
[+] EMBL AA753924 [GNNGCGCGGNGTGGNAAAACCCGGGGNNGGAAAAGAANNTCTTATGNGGGGCCCNCCCCCGCANTTTAAAGAGAAGTTTNAACGGTTTCGCAAGNTTTGGNCCCCAAACNTCACCAAAGTNAAGGGAGAGAGGAGTAGAGGTNTTNNTCCATGGCGGGGACGGNGAAAATNGCTGNATGATTGTTGTCGGTGGTTGGGCGCAAGATGGACAAGGCTTCAATCATCAAGGANGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCCGCCGCCGCGGCGAGCGCCGCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCACCACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTGTCGTCCATCAGCGACGCCCTGCTCGCCGCGGCGGCGCCGGCGCCGCCGGTGGAGATCCAGGAGCTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTGAGCGTGACGTGCAGCAAGCGCCGCGACGCCATGGCCCGGGT]
consensusID : consensus_13548#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 241 fasta sequence
[GGTGTAANCCCCTTACTCTATGTTACGTGCGGAGGGAAGGGTTCGCAACCTCTTCAAANAGAACCCAAACCTTTAGCATTGTTAATTTTGGGGGTTTTGGCTGAATAAAGTTGTTTCAAATTCAGGTAGATCACATGGATAGTGTCCCAATGAACAGATGGTGGAGCTGCTCTNTCCCAGCTTGTGGCGACCGCCACGTCCGTTGAGGCTCCCCACTGAGCCTTNATTTTTACGTTATTGA]
[+] EMBL BI805906 [GGTGTAANCCCCTTACTCTATGTTACGTGCGGAGGGAAGGGTTCGCAACCTCTTCAAANAGAACCCAAACCTTTAGCATTGTTAATTTTGGGGGTTTTGGCTGAATAAAGTTGTTTCAAATTCAGGTAGATCACATGGATAGTGTCCCAATGAACAGATGGTGGAGCTGCTCTNTCCCAGCTTGTGGCGACCGCCACGTCCGTTGAGGCTCCCCACTGAGCCTTNATTTTTACGTTATTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13548#0 AGAGAGACACAAGCCAACCTGNAACTCGAAGCAGAGCAAACGCGAAGCAGAGCAAGCGCC 60
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 ATGGACGCCGAGATGGCCATGGGCGAGAGCTTCGCCTACTACTGGGAGACGCAGCGCTAC 120
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 CTTGAGTCCGAGGAGCTCGACAGCATGTACCTGCCGACGCAGGATGACTCCAACTACGAG 180
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 TCGAGCTCGCCGGACGGGTCGCACTCGTCGTCGGCGCCGGCGCCGGCGGCCGTGGGCGGG 240
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 GACGCAGCCGCCGCGGTGGCGGGTAGCGGTGGCGGGATGACGACGATGATGATGGGCGGC 300
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 GGCGGCGGCGGTGGCGACGACGCCGGTGGCGCGAACAAGAACATCCTCATGGAGCGCGAC 360
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 CGCCGCCGCAAGCTCAACGAGAAGCTCTACGCGCTCCGCAGTGTCGTGCCCAACATCACC 420
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 AAGATGGACAAGGCGTCGATCATCAAGGACGCGATCGAGTACATCCAGCGCCTGCAGGCG 480
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 GAGGAGCAGCAGATGCTCCGGGAGGTCGCCGCGCTCGAGTCCGCCGCCGCGGCGAGCGCC 540
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 ---------------------------GNNGCGCGGNGTGGNAAAACCCGGGGNNGGAAA 33
consensus_13548#0 GCCCCGGCCGCGGCGAACCCGTTCGCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGC 600
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 ------------------------------------------------------------
consensus_13548#3 AGAANNTCTTATGNGGGGCCCNCCCCCGCANTTTAAAGAGAAGTTTNAACGGTTTCGCAA 93
consensus_13548#0 CACCACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTG 660
consensus_13548#2 --------------------------------------GGTGAA---CGNCCTGTCCG-G 18
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 -----------------------AAGGTAAGGGAGAGAGGAGTAGAGGTGTTCGTCCATG 37
consensus_13548#3 GNTTTGGNCCCCAAACNTCACCAAAGTNAAGGGAGAGAGGAGTAGAGGTNTTNNTCCATG 153
consensus_13548#0 TCGTCCATCAGCGAC-GCCCTGCTCGCCGCGGCGGCGCCGGCGCCGCCGGTGGAGATCCA 719
consensus_13548#2 TCGTCCATCAACGAC-CCCNTGTTNCCCTCG-CGGC-CCGCCCCCCCCGTGGGAGATCCA 75
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 GCGGCGACGGCGACA-TTGCTGACTGACTGCTCGTCGGTGGTTGGGCGCA-GATGGACAA 95
consensus_13548#3 GCGGGGACGGNGAAAATNGCTGNATGATTGTT-GTCGGTGGTTGGGCGCAAGATGGACAA 212
consensus_13548#0 GGAGCTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTG-AGCGTGACGTGCAGCA 778
consensus_13548#2 GGACTTGCGC-TTTCGGAGGTGCCCACCAGGGT-CTGGTGGTG-AGC-TGA-GTCCAGCA 130
consensus_13548#4 ------------------------------------GGTG-TA-ANCCCCT--TACTCTA 20
consensus_13548#1 GGCGTCGATCATCAAGGACGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCA 155
consensus_13548#3 GGCTTCAATCATCAAGGANGCGATCGAGTACATCCAGCGCCTGCAGGCGGAGGAGCAGCA 272
* * * * *
consensus_13548#0 --AGCGCCGCGACGCCATGGCCCGGGTGTGCCGCGCCCTCGAGGAGCTCCGCCTCCGCGT 836
consensus_13548#2 --AGCGCCGCGAC-CCATG-CCCGGGTGT-CCGCGCCCTCGAGGAGCTCC-CCTCCGCGT 184
consensus_13548#4 --TGTTACGTG---CGGAGGGAAGGGTTCGCAACCTCTTCAAANAGAACC--CAAACCTT 73
consensus_13548#1 GATGCTCCGGGAGGTCGCCGCGCTCGAGTCC-GCCGCCGCGGCGAGCGCCGCCCCGGCCG 214
consensus_13548#3 GATGCTCCGGGAGGTCGCCGCGCTCGAGTCCCGCCGCCGCGGCGAGCGCCGCCCCGGCCG 332
* ** * * * * * * ** ** * *
consensus_13548#0 CATCACCGCCAACAT-CACCTCCGTCGCCGGCTGCCTCATGCACACCCTCTTCGTCGAGG 895
consensus_13548#2 CATCACCGCCCACATTCACCTCCGTCGCCGGCTGCCTCATGCACCCCCTNTTCGTCGAGG 244
consensus_13548#4 TAGCATTGTTAATTT----TGGGGGTTTTGGCTG---AATAAAGTTGTTTCAAATTCAGG 126
consensus_13548#1 CGGCGA-ACCCGTTC-----GCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCAC- 267
consensus_13548#3 CGGCGA-ACCCGTTC-----GCCGGCCTCGGCGCCGACGAGGAACACGAGTACGGCCAC- 385
* * *** * *
consensus_13548#0 TAGATCACATGGATAGTGTCCAAATGAAGCA-GATGGTGGAGGCTGCTCTCTCCCAGCTT 954
consensus_13548#2 TAGATCCCCTGGATAGTGTCCCAATGAACC--GATGGTGGAGGCTGCTCTCTCCCCGCTT 302
consensus_13548#4 TAGATCACATGGATAGTGTCCCAATGAACA--GATGGTGGAG-CTGCTCTNTCCCAGCTT 183
consensus_13548#1 CACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTGTCG 327
consensus_13548#3 CACCACCCCTCGTCGTCGTCGGAGCGGACGAAGAAGGTGAAGCGGGCGCTGTCCGTGTCG 445
* * * * * *** * * * ** **** ** ** ** *** *
consensus_13548#0 GTGGCGACCGGCA-GTCCGTTGAG----CTCCATGAGCTATTAGTTATGAGCTGGATAGA 1009
consensus_13548#2 GTGGCGACCG-CN-GTCCCTTGAG----CTCCCTGAGCTATTAGTTATGAGCTGGATAGA 356
consensus_13548#4 GTGGCGACCGCCACGTCCGTTGAGGCTCCCCACTGAGCCTTNATTTTTACGTT--ATTGA 241
consensus_13548#1 TCCATCAGCGACGCCCTGTTTTNTCCCGCGTNNNNTNNNNNNNNNNTNNNNTNTNTTNTN 387
consensus_13548#3 TCCATCAGCGACGCCCTGCTCGCCGCGGCGGCGCCGGCGCCGCCGGTGGAGATCCAGGAG 505
* ** * * *
consensus_13548#0 TATATGGAGTCA-TGCGTTTTGGCCACCTACTTTACCTAGTCTCA-TTCGCAATAAAGCG 1067
consensus_13548#2 TATATGGAGTCACTGCNTTTTGGCCNCCTACTTTACCTAGTCTCACTTCNCCATAAAGCG 416
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTCCCTT 447
consensus_13548#3 CTGCGCGTGTCGGAGGTGGGCGACAGGGTGCTGGTGGTGAGCGTGACGTGCAGCAAGCGC 565
consensus_13548#0 CATTTTTATGTATGCTTGGTGATGTTGTTGTTGTCATTTTTGCGACACCCCACTACGTGA 1127
consensus_13548#2 CCTTTTTATGTATGCTTGGTGATGTTGTTGTTGTCCNTTTTGCGACCCCCCCCTACGTGA 476
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTCTTTTTTTTTTTTTTNTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTNNTT 507
consensus_13548#3 CGCGACGCCATGGCCCGGGT---------------------------------------- 585
consensus_13548#0 TGGAGGTGGTTGTTTTCTTGCGAGGCAACGATTTAGTGGCTGGATGATAGATTTAAGTAT 1187
consensus_13548#2 TGGAGGTGGTTGTTTTCTTGCGAGGCCACGATTTAGTGGCTGGATGATAGATTTAAGTAT 536
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTTTTNTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTT 567
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 TTTGGAAATTTTGAGTACGCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAG 1247
consensus_13548#2 TTTGGAAATCTTGAGTACCCTGACTTGTTTATGTAGCTATTAATATTGATGAATAATAAG 596
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTNTTTTTTTTTTTTTTTTT 627
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 GTGGTCCAGCTTAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA 1307
consensus_13548#2 GTGGTCCCGCTTAATGAAAACGAAAATGTGTGAATTACCTCTNTGAAAAA---------- 646
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTNTTTTTTTTNTT 687
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------------------ 1337
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTTTTTCTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTNTNNTTTTNTTTTNTT 747
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 ------------------------------------------------------------
consensus_13548#2 ------------------------------------------------------------
consensus_13548#4 ------------------------------------------------------------
consensus_13548#1 TTTTTTTTTTTTNTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 807
consensus_13548#3 ------------------------------------------------------------
consensus_13548#0 --------------------------------------
consensus_13548#2 --------------------------------------
consensus_13548#4 --------------------------------------
consensus_13548#1 TTTTTTTTTNTTTTTTTTTTTTTTTTTTCTCTTCTAAT 845
consensus_13548#3 --------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||