cluster # 1360

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Oryza sativa
cluster # 1360 cluster # 1360 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1360#0 length = 787 sequences # 2

consensusID : consensus_1360#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 787
fasta sequence

                              [CCTCGAGAGTGTTTCCCCTTTTTTGTTGGATCCAATAATCCGGAGGTTTTTTTAACCGGAATCGTCTCAAGATCCATAACGAGCAAACGATAGTTGTTTCCGACACCAACATTAGACCATATCGAGTCAACTGACAACCATAGACTACACCAAAAATACGGCGGACTGCATAGATAAAACATCAGTGTCGAGCAGAAGGAACCGCTCATCACTTGACCTCCTTCAGCCCATGAGAGAAGTAAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGGAAACACCAAGCCGCCATCATCATGGATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGGTGGCACCCTCAATGTTCTTCTTGAATTCCTCTTGCTTTTCCGCATCCAGCTTGGCGGAGAGGTTCTTGATGTAGCGCTTCATGAAGGTCACAAACTGCTTCTTGTCAAAAGGAGGGTGCTCCTGAAGACGGAAGGTGTCCACAATGTCGACCACCTTCACAGCTTGGGCATCAACACCCTCATCATCACCACCACCCTCAGCAGATGGGTTGGCACCAATGTCCACATCAATAGCTCCTTGAACGACCCACTTGCCATCGACTTCCCAGAGGATGCCGTTCTCGATCTCTCTGTAGGGGAACGAATCCGACAGGAGCTCGTCACCGGTAAGCAGATCCTGGTAGACCAACATGGTGCCGCCTCTTCAAATCTCTCCCCCCGAATTAAAAAAAAATCGGCAGCGGAAACACTCCTCGTGCCGAATTCC]

[+] EMBL CB683312             [CCTCGAGAGTGTTTCCCCTTTTTTGTTGGATCCAATAATCCGGAGGTTTTTTTAACCGGAATCGTCTCAAGATCCATAACGAGCAAACGATAGTTGTTTCCGACACCAACATTAGACCATATCGAGTCAACTGACAACCATAGACTACACCAAAAATACGGCGGACTGCATAGATAAAACATCAGTGTCGAGCAGAAGGAACCGCTCATCACTTGACCTCCTTCAGCCCATGAGAGAAGTAAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGGAAACACCAAGCCGCCATCATCATGGATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGGTGGCACCCTCAATGTTCTTCTTGAATTCCTCTTGCTTTTCCGCATCCAGCTTGGCGGAGAGGTTCTTGATGTAGCGCTTCATGAAGGTCACAAACTGCTTCTTGTCAAAAGGAGGGTGCTCCTGAAGACGGAAGGTGTCCACAATGTCGACCACCTTCACAGCTTGGGCATCAACACCCTCATCATCACCACCACCCTCAGCAGATGGGTTGGCACCAATGTCCACATCAATAGCTCCTTGAACGACCCACTTGCCATCGACTTCCCAGAGGATGCCGTTCTCGATCTCTCTGTAGGGGAACGAATCCGACAGGAGCTCGTCACCGGTAAGCAGATCCTGGTAGACCAACATGGTGCCGCCTCTTCAAATCTCTC                                                    ]
[+] EMBL CB635086             [                                    AATCCGGAGGTTTTTTTAAAACGTCTCAGCTCAACATCCATAACAAGCAAACGATAGTTGTTTCCGACACCAACATTGGACCATAACGAGTCAACTGACAACCATAGACTAGACCAAAAATACCGCGGACTGCATAGATAAAACATCAGTGTCGAGCAGAAGGAACCGCTCAGCACTTGACCTCCTTCAGCCCATGAGAGAAGTAAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGCAAACACCAAGCCGCCATCATCATGCATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGGTGGCACCCTCAATGTTCTTCTTGAATTCCTCTTGCTTTTCCGCATCCAGCTTGGCGGAGAGGTTCTTGATGTAGCGCTTCATGAAGGTCACAAACTGCTTCTTGTCAAAAGGAGGTTGCTCCTGAAGACGGAAGGTGTCCACAATGTCGACCACCTTCACAGCTTGGTCATCAACACCCTCATCATCACCACCACCCTCAGCAGATGGGTTGGCACCAATGTCCACATCAATAGCTCCTTGAACGACCCACTTGCCATCGACTTCCCAGAGGATGCCGTTCTCGATCTCTCTGTAGGGGAACGAATCCGACAGGAGCTCGTCACCGGTAAGCAGATCCTGGTAGACCAACATGGTGCCGCCTCTTCAAATCTCTCCCCCCGAATTAAAAAAAAATCGGCAGCGGAAACACTCCTCGTGCCGAATTCC]




>consensus_1360#0
CCTCGAGAGTGTTTCCCCTTTTTTGTTGGATCCAATAATCCGGAGGTTTTTTTAACCGGA
ATCGTCTCAAGATCCATAACGAGCAAACGATAGTTGTTTCCGACACCAACATTAGACCAT
ATCGAGTCAACTGACAACCATAGACTACACCAAAAATACGGCGGACTGCATAGATAAAAC
ATCAGTGTCGAGCAGAAGGAACCGCTCATCACTTGACCTCCTTCAGCCCATGAGAGAAGT
AAAGGAAGGTTGGGTCGGTGGCTCCGTCCTTGTAGTAGGGAAACACCAAGCCGCCATCAT
CATGGATGCTCTCACCAACAAAGAACTGAAGGTCCTTGAGCTTTCCAAGCAAGTACTTGG
TGGCACCCTCAATGTTCTTCTTGAATTCCTCTTGCTTTTCCGCATCCAGCTTGGCGGAGA
GGTTCTTGATGTAGCGCTTCATGAAGGTCACAAACTGCTTCTTGTCAAAAGGAGGGTGCT
CCTGAAGACGGAAGGTGTCCACAATGTCGACCACCTTCACAGCTTGGGCATCAACACCCT
CATCATCACCACCACCCTCAGCAGATGGGTTGGCACCAATGTCCACATCAATAGCTCCTT
GAACGACCCACTTGCCATCGACTTCCCAGAGGATGCCGTTCTCGATCTCTCTGTAGGGGA
ACGAATCCGACAGGAGCTCGTCACCGGTAAGCAGATCCTGGTAGACCAACATGGTGCCGC
CTCTTCAAATCTCTCCCCCCGAATTAAAAAAAAATCGGCAGCGGAAACACTCCTCGTGCC
GAATTCC

clustalw multiple alignements is not computed in this case