These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13612#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1216 fasta sequence [GCGAGGAAGAACCGAAGAAGCAGCAGAGCAGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGCTGGTGACCTTCTACGGAGTGAAATTTCAACTGGCAGTGAGAAAGGGGAGTTGATCTTAAATATAATAAAAGAAGGGAAGATTGTTCCATCAGAGATTACTGTTGAACTGATTAGAAAAGCTATGGAATCGAGCGATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTTGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCTGTTGTTGACTACTACACTTCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGTCTATTCTCTCTCATTGAGGGCATTGGGAAGCGTGCAAATGGTGGGAAAAGTTTGCATCTGCAGCATGCATGGACGACGATTGGTCATGATGCTTTTTCTACAGCTGCAGCCCGGCGATAGATTAAGCGCCGGCTACTCTCTCTCTCCTGTTTTCTCACTCTTCCATGTAGGATTTATCTTAGATGAATAGTACTACCGCCTGCTGACTGTAACCTATTATACCTGCTCTTATGCTACCCAATTGCTTATTGGTTATTCTCTAGTACCAAACTGGCTCTGTATGCTTGCCAGTTGCCGTGTACTTAGGATATTTTAATCCTACGAGTCAAACTACTCTCTATATGCCTCCTTGTTTACAGGTCAATAAATTGAGAGATGCTACCAAGTTGTTTTCAAGCAACATTTTGTCATATATTAAAGCTCTC] [+] EMBL AK068066 [GCGAGGAAGAACCGAAGAAGCAGCAGAGCAGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGCTGGTGACCTTCTACGGAGTGAAATTTCAACTGGCAGTGAGAAAGGGGAGTTGATCTTAAATATAATAAAAGAAGGGAAGATTGTTCCATCAGAGATTACTGTTGAACTGATTAGAAAAGCTATGGAATCGAGCGATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTTGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCTGTTGTTGACTACTACACTTCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGTCTATTCTCTCTCATTGAGGGCATTGGGAAGCGTGCAAATGGTGGGAAAAGTTTGCATCTGCAGCATGCATGGACGACGATTGGTCATGATGCTTTTTCTACAGCTGCAGCCCGGCGATAGATTAAGCGCCGGCTACTCTCTCTCTCCTGTTTTCTCACTCTTCCATGTAGGATTTATCTTAGATGAATAGTACTACCGCCTGCTGACTGTAACCTATTATACCTGCTCTTATGCTACCCAATTGCTTATTGGTTATTCTCTAGTACCAAACTGGCTCTGTATGCTTGCCAGTTGCCGTGTACTTAGGATATTTTAATCCTACGAGTCAAACTACTCTCTATATGCCTCCTTGTTTACAGGTCAATAAATTGAGAGATGCTACCAAGTTGTTTTCAAGCAACATTTTGTCATATATTAAAGCTCTC] consensusID : consensus_13612#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1173 fasta sequence [AACTTGGGAGGAGGCGAGGAAGAACCGAAGAAGCAGCAGAGCAGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGC-TGGTGACCTTCTAC-GGAGTGAAATTTCAAC-TGGCAGTGAG-AAAGGGGAGTTGATC-TTAAATATAATAAAA-GAA-GGGAAGATT-GTTCCATCAGAGATTACTG-TT-GAACTGATTAGAAAAGCTATGGAATCGAGCGATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTTGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCT-GTTGTTGACTACTACA-CTTCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCAGGGGCCTTTGGCTGGAAGGACATCTTGTAGGAAGACCCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTGCTA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGT] [+] EMBL AK071444 [AACTTGGGAGGAGGCGAGGAAGAACCGAAGAAGCAGCAGAGCAGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGC TGGTGACCTTCTAC GGAGTGAAATTTCAAC TGGCAGTGAG AAAGGGGAGTTGATC TTAAATATAATAAAA GAA GGGAAGATT GTTCCATCAGAGATTACTG TT GAACTGATTAGAAAAGCTATGGAATCGAGCGATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTTGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAGCAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCT GTTGTTGACTACTACA CTTCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCAGGGGCCTTTGGCTGGAAGGACATCTTGTAGGAAGACCCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAA ] [+] EMBL AU094688 [ AAGAAGCAGCAGAGCAGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGC TGGTGACCTTCTAC GGAGTGAAATTTCAAC TGGCAGTGAG AAAGGGGAGTTGATC TTAAATATAATAAAA GAA GGGAAGATT GTTCCATCAGAGATTACTG TT GAACTGATTAGAAAAGCTATGGAATCGAGCGATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTTGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAG CTAAATATTCCTGGTTGTTGACTACTACA CTTCAAGAGGAAAGG TCACAAGATAAATGCAACCGGAACTGAAG AGNAATCTTTGGAGCAGTCCACAAGCTG TTNCCCCCT ] [+] EMBL AU164177 [ AAGAAGCAGCAGAGCAGAGATCACCTGCNATTGCNAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTNTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTNGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGNTCGCTTCTNATTTTGGGTTTGCTCATTTGAGTGCTTGGTGACCTTCTAC GGAGTGAAATTTCAAC TGGCAGTGAG AAAGGGGAGTTGATC TTAAATATAATAAAN GAAGGGGAAGATT GTTCCATCAGAGATTACTGTTT GACCTGATTAGGAAAa ] [+] EMBL AU064338 [ AAGAAGCAGCAGAGCAGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGNCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTACTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGC TGGTGACCTTCTACGGGAGTGAAATTTCAAC TGG ATNGAGNTTTTTTNTGTTGAGCTTTAAATATAATAAAAGGAA GGGGAGATTGGTTCCATCAGAGATTACTG TTGGAACNG TTAGAAAA ] [+] EMBL AU064298 [ AAGAAGCAGCAGANANGAGATCACCTGCGATTGCGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGATCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCACCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGATGGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTNGGAAAGGTACGCAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGC TGGTGACCTTCTAC GGAGTGAAATTTCAACTTGGCAGTGAG AAAGGGGAGTTGATC TTAAATATAATAAAA GAA GGGAAGATT GTTNCATCAGAGATTACTGTTT GAACTGATTAGGAA ] [+] EMBL CA765781 [ gtGATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTCGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCT GTTGTTGACTACTACA CTTCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCAGGGGCCTTTGGCTGGAAGGACCTCTTGTAGGAAGACCCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTAACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTGTTGTTGCATAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTtgc ] [+] EMBL AU066302 [ TTTGAAAGAATAACTGGAACAGAACCAGACCTTGTGATTTTCTTTGACTGCCCTGAGGATGAGATGGTTAAACGTTTACTAGGCCGTAACCAGGGACGAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCT GTTGTTGACTACTACA CTTCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCAGGGGCCTTTGGCTGGAAGGACATCTTGTAGGAAGA CCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGG AG CTCACGTCTTTAT AAACCATTGTATATATGTTTCACTATTATG ATTCCA CTGNTAATAGCTGGTGCTGACCncac ] [+] EMBL AU161906 [ ACCAGGAACGAGTGGATGATAACATTG AACAATCCAG AGCG CTAAAGGTGTNTGAGAGTCTAAATATTCCTGGTTNTTGACTACTACACCTTCAAGA GAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCTTTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCAGGGGCCTNTGGCTGGAAGGACATCTTGTAGGAAGACCCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTGCTA AAAAAA ] [+] EMBL CF328865 [ GCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTGCTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGT] consensusID : consensus_13612#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 705 fasta sequence [TCNCCCTTTGAAGGAATAACTGGAAACCGGAACCCAGCCCTTGGGATTTTCCTTTGAACTGCCCCTGAGGATGAGATTGGTTAACCGTTTACTAGGCCGTAACCAGGGACGAAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCCTGTTGTTGACTACTACACTTCCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCCTTTGGAGCAGTCCACAAGCTGTTTTCCCCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCCAGGGGCCTTTGGCTGGAAGGACATCTTGTAGGAAGACCCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTGCTATTACCTTGGGTAGTCCTATGGTAGGCGAATGTAGTTCATGTATGACCACTATGATGATGACCGATATTAGGAATAATGTTTGTTTGCTTGAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C99569 [TCNCCCTTTGAAGGAATAACTGGAAACCGGAACCCAGCCCTTGGGATTTTCCTTTGAACTGCCCCTGAGGATGAGATTGGTTAACCGTTTACTAGGCCGTAACCAGGGACGAAGTGGATGATAACATTGAAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCCTGTTGTTGACTACTACACTTCCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCCTTTGGAGCAGTCCACAAGCTGTTTTCCCCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCCAGGGGCCTTTGGCTGGAAGGACATCTTGTAGGAAGACCCACTTTGTCTAGCATCCAAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTGCTATTACCTTGGGTAGTCCTATGGTAGGCGAATGTAGTTCATGTATGACCACTATGATGATGACCGATATTAGGAATAATGTTTGTTTGCTTGAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C99540 [ AGGACANCTTGTGGGAANACCCA TTTGTCTAGCA CCCAAANTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAA GCCACCTGGTAATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCACAGTGCTGTAACGCATTTTGGTCACAATAATCCTACAAACCTTTTGCTATTACCTTGGGTAGTCCTATGGTAGGCGAATGTAGTTCATGTATGACCACTATGATGATGACCGATATTAGGAATAATGTTTGTTTGCTTGAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_13612#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 298 fasta sequence [GTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCCAGGGGCCTTTGGCTGGAAGGACCTCTTGTAGGAAGACCCACTTTGTCTAGCATCCCAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTAACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCATAAAAAAAAAA] [+] EMBL BQ908938 [GTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATAAGCCAGGGGCCTTTGGCTGGAAGGACCTCTTGTAGGAAGACCCACTTTGTCTAGCATCCCAAAGTTCTCTCTATTTCTCTCGTGTTCTTTTGGAAGCCTCACGTCTTTATTAAAACCATTGTATATATGTTTCACTATTATGAATGCCACCTGGTAATGGCTGGTGCTGACCTTAACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACAATAGTATGCTATTGTTGCATAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 AACTTGGGAGGAGGCGAGGAAGAACCGAAGAAGCAGCAGAGCAGAGATCACCTGCGATTG 60 consensus_13612#0 -------------GCGAGGAAGAACCGAAGAAGCAGCAGAGCAGAGATCACCTGCGATTG 47 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 CGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGA 120 consensus_13612#0 CGAGGGGAGGAGGCAGCGATGTGGCGGCGGCAAGTGGGTGCCCTTCTTCTCCGGCACCGA 107 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 TCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCA 180 consensus_13612#0 TCCACGCCTTCCTCCACCCTCCGCCACCATCTCCCCCTCCCCGTCCCCGACCAGAGCCCA 167 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 CCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGAT 240 consensus_13612#0 CCTCTCGCTTCCAATCTTCTGCTCCGCCTCTTCACTTCTCAATCTGGAGAGGGGGGTGAT 227 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 GGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACG 300 consensus_13612#0 GGTGCCACCAAGCCCTTCATTGCTTTCGTCTTAGGGGGTCCCGGGAGTGGGAAAGGTACG 287 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 CAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGCTGGTGACCTTCTA 360 consensus_13612#0 CAATGTGTCCGGATCGCTTCTGATTTTGGGTTTGCTCATTTGAGTGCTGGTGACCTTCTA 347 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 CGGAGTGAAATTTCAACTGGCAGTGAGAAAGGGGAGTTGATCTTAAATATAATAAAAGAA 420 consensus_13612#0 CGGAGTGAAATTTCAACTGGCAGTGAGAAAGGGGAGTTGATCTTAAATATAATAAAAGAA 407 consensus_13612#2 ------------------------------------------------------------ consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 GGGAAGATTGTTCCATCAGAGATTACTGTTGAACTGATTAGAAAAGCTATGGAATCGAGC 480 consensus_13612#0 GGGAAGATTGTTCCATCAGAGATTACTGTTGAACTGATTAGAAAAGCTATGGAATCGAGC 467 consensus_13612#2 ---------------------------------------------------TCNCCCTTT 9 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 GATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTT 540 consensus_13612#0 GATGCTAAAAGGGTTCTTATTGATGGTTTCCCAAGGTGTGAGGAAAACAGGATCGCCTTT 527 consensus_13612#2 GAAGGAATAACTGGAAACCGGAACCCAGCCCTTGGGATTTTCCTTTGAACTGCCCCTGAG 69 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 GAAAGAATAACTGGAAC---AGAACCAGACCTTGTGATTTTCTTTGA---CTGCCCTGAG 594 consensus_13612#0 GAAAGAATAACTGGAAC---AGAACCAGACCTTGTGATTTTCTTTGA---CTGCCCTGAG 581 consensus_13612#2 GATGAGATTGGTTAACCGTTTACTAGGCCGTAACCAGGGACGAAGTGGATGATAACATTG 129 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 GATGAGAT-GGTTAAACGTTTACTAGGCCGTAACCAGGGACGA-GTGGATGATAACATTG 652 consensus_13612#0 GATGAGAT-GGTTAAACGTTTACTAGGCCGTAACCAGGGACGA-GTGGATGATAACATTG 639 consensus_13612#2 AAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCCCTGTTGTTGACTAC 189 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 AAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCC-TGTTGTTGACTAC 711 consensus_13612#0 AAACAATCAAGAAGCGCCTAAAGGTGTTTGAGAGTCTAAATATTCC-TGTTGTTGACTAC 698 consensus_13612#2 TACACTTCCAAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATCCT 249 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 TACACTTC-AAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATC-T 769 consensus_13612#0 TACACTTC-AAGAGGAAAGGTTCACAAGATAAATGCAACCGGAACTGAAGAAGAAATC-T 756 consensus_13612#2 TTGGAGCAGTCCACAAGCTGTTTTCCCCCTTAAGGTTTTGAGACTTTTGTCTTCCACATA 309 consensus_13612#3 --------GTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATA 52 consensus_13612#1 TTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGGTTTTGAGACTTTTGTCTTCCACATA 829 consensus_13612#0 TTGGAGCAGTCCACAAGCTGTTTTCCTCCTTAAGTCTATTCT-CTCTCATTGAGGGCATT 815 ****************** ******* * * ** * * *** consensus_13612#2 AGCCAGGG-GCCTTTGGCTGGAAGGACAT---CTTGTAGGAAG-ACCCACTTTGTCTAGC 364 consensus_13612#3 AGCCAGGG-GCCTTTGGCTGGAAGGACCT---CTTGTAGGAAG-ACCCACTTTGTCTAGC 107 consensus_13612#1 AGC-AGGG-GCCTTTGGCTGGAAGGACAT---CTTGTAGGAAG-ACCCACTTTGTCTAGC 883 consensus_13612#0 GGGAAGCGTGCAAATGGTGGGAAAAGTTTGCATCTGCAGCATGCATGGACGACGATTGG- 874 * ** * ** *** **** * ** ** * * * ** * * * consensus_13612#2 ATCCAAAAGTTCTCTCTATTTCT-----CTCGTGTTCTTTTGGAAGCC----------TC 409 consensus_13612#3 ATCCCAAAGTTCTCTCTATTTCT-----CTCGTGTTCTTTTGGAAGCC----------TC 152 consensus_13612#1 ATCCAAAAGTTCTCTCTATTTCT-----CTCGTGTTCTTTTGGAAGCC----------TC 928 consensus_13612#0 -TCATGATGCTTTTTCTACAGCTGCAGCCCGGCGATAGATTAAGCGCCGGCTACTCTCTC 933 ** * * * * **** ** * * * * ** *** ** consensus_13612#2 ACGTCTTTATTAAAACCATTGTATATATGTTTCACT----ATTATGAATGCCACCTGGTA 465 consensus_13612#3 ACGTCTTTATTAAAACCATTGTATATATGTTTCACT----ATTATGAATGCCACCTGGTA 208 consensus_13612#1 ACGTCTTTATTAAAACCATTGTATATATGTTTCACT----ATTATGAATGCCACCTGGTA 984 consensus_13612#0 TCTCCTGTTTTCTCACTCTTCCATGTAGGATTTATCTTAGATGAATAGTACTACCGCCTG 993 * ** * ** ** ** ** ** * ** * ** * * * * *** * consensus_13612#2 ATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACA 525 consensus_13612#3 ATGGCTGGTGCTGACCTTAACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACA 268 consensus_13612#1 ATGGCTGGTGCTGACCTTCACGTTATCCTTGTCATGCCACAGCATGAAGAAGCATGAACA 1044 consensus_13612#0 CTGACTGTAACCTATTATACCTGCTCTTATGCTACCCAATTGCTTATTGGTTATTCTCTA 1053 ** *** * * * * ** * * * ** * * * * consensus_13612#2 ATAGTATGCTATTGTTGCACAG-----TGCTGTAACGCATTTTGGTCACAATAATCCTAC 580 consensus_13612#3 ATAGTATGCTATTGTTGCATAA-----AAAAAAAA------------------------- 298 consensus_13612#1 ATAGTATGCTATTGTTGCACAG-----TGCTGTAACGCATTTTGGTCACAATAATCCTAC 1099 consensus_13612#0 GTACCAAACTGGCTCTGTATGCTTGCCAGTTGCCGTGTACTTAGGATATTTTAATCCTAC 1113 ** * ** ** * consensus_13612#2 AAACCTTTTGCTATTACCTTGGGTAGTCCTATGGTAGGCGAATGTAGTTC-ATGTATGAC 639 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 AAACCTTTTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-AAAAAAAAA 1158 consensus_13612#0 GAGTCAAACTACTCTCTATATGCCTCCTTGTTTACAGGTCAATAAATTGAGAGATGCTAC 1173 consensus_13612#2 CACTATGATGATGACCGATATTAGGAATAATGTTTGTTTGCTTGAAAAAAAAAAAAAAAA 699 consensus_13612#3 ------------------------------------------------------------ consensus_13612#1 AAAAAAAACCCCTGT--------------------------------------------- 1173 consensus_13612#0 CAAGTTGTTTTCAAGCAACATTTTGTCATATATTAAAGCTCTC----------------- 1216 consensus_13612#2 AAAAAA 705 consensus_13612#3 ------ consensus_13612#1 ------ consensus_13612#0 ------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||