cluster # 13617

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Oryza sativa
cluster # 13617 cluster # 13617 Sequences # 13 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13617#0 length = 966 sequences # 9

consensus_13617#1 length = 878 sequences # 2
consensus_13617#2 length = 755 sequences # 2

consensusID : consensus_13617#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 966
fasta sequence

                              [GTGTGCTCTCCTCCACCTCCACCCCATAAATATCCCCTTCGTCGTCTTCGTCATCGTCTCCAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG-AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAGGTTTTGAGGAGCAGTTGTCAATGCTGGATTCAGTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTTGTTGACAGGCACCTGCAGTCAATTCTTGTAGCTGAGAAATAACTCAAAAGGTTGAGGGTCAGCTAT]

[+] EMBL CB650139             [GTGTGCTCTCCTCCACCTCCACCCCATAAATATCCCCTTCGTCGTCTTCGTCATCGTCTCCAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAGGTTTTGAGGAGCAGTTG                                                                                                                        ]
[+] EMBL OSS4314A             [                                            TCTTCGTCATCGTCTCCAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGNGAGGAGAAAGGGTCTGATCGGGGTG TTCCTGTGCATGACTCCGAAGTTG TTGCTCATTGCTTGCTCCTGGTG AAGCAACGATTNAAGTTAAGGTTGGAANAAAGCGGCTTGTGGTTtttaangg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSS4333A             [                                            TCTTCGTCATCGTCTCCAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGNGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCANCGATTCAGGTGAGGGTGGGAGCAAGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSS2918A             [                                            TCTTCGTCATCGTCTCCAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTNTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB651145             [                                                                                            GTAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAGGTTTTGAGGAGCAGTTGTCAATGCTGGATTCAGTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTTGTTGACAGGCACCTGCAGTCAATTCTTGTAGCTGAG                              ]
[+] EMBL CB664033             [                                                                                                     TCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGATCTGCAGGAGAATCAACGATGCAGGATACTAGGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAACGTTTATGTACGTTCAGAGTTCAAGAGCTCAGTGCAAGAGGATCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAGACGGAGTTGGAGCACGCAGAGCATGACCCAGATCTCA                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB633981             [                                                                                                       CACTTCTTTAAAATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACCCCTCACGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCTCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGATTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGGTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCATAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATAT                                                                                                                                                                ]
[+] EMBL CB675283             [                                                                                                            CCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAGGTTTTGAGGAGCAGTTGTCAATGCTGGATTCAGTTGACTTAAA                                                                                              ]
[+] EMBL C71938               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTNTGGCTAGCTTTGAAATAGGTTTTGAGGAGCAGTTGTCAATGCTGGATTCAGTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTTGTTGACAGGCACCTGCAGTCAATTCTTGTAGCTGGGAAATAACTCAAAAGGTTGAGGGTCAGCTAT]




>consensus_13617#0
GTGTGCTCTCCTCCACCTCCACCCCATAAATATCCCCTTCGTCGTCTTCGTCATCGTCTC
CAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCC
AGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGA
CGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATC
CGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG
AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCT
CCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGA
GAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGA
GTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACA
TATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGT
TCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCA
GAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTA
ATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACA
GTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAGGTTTTGAGGAG
CAGTTGTCAATGCTGGATTCAGTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTT
GTTGACAGGCACCTGCAGTCAATTCTTGTAGCTGAGAAATAACTCAAAAGGTTGAGGGTC
AGCTAT

consensusID : consensus_13617#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 878
fasta sequence

                              [AGCGCGCTTTTAGAAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACCCCAAAAGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAGAAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGATTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAAGTTTTGAGGAGCACTTGTCAATGCTGGATTCATTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTTGTTGACAGGCACCTGCAGGCGAAGACATTTATGATTATTGAATTAGTTTTCCTTAATTT]

[+] EMBL CB634061             [AGCGCGCTTTTAGAAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACCCCAAAAGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAGAAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGATTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTG                                                                                                                                                             ]
[+] EMBL CB633715             [                                                                                                                                                                                                                                                                aaggccaTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTCCAAGAGAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGTTTATGTAGATTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAAGTTTTGAGGAGCACTTGTCAATGCTGGATTCATTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTTGTTGACAGGCACCTGCAGGCGAAGACATTTATGATTATTGAATTAGTTTTCCTTAATTT]




>consensus_13617#1
AGCGCGCTTTTAGAAATCCCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAG
GTGCGTGGCCATGGCGGACCCCAAAAGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTC
CGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGT
GTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAGAAGGGTCTGATCGGGGTGCTC
CCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCTCCTGGTGTAGGCAGCGATTCA
GGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGAGAATCAACGAAGCAGGATACT
AAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGAGTAGCTGCTAGGGCTTTGCAC
CTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACATATATTGTCGTCCTTGAAGGT
TTATGTAGATTCAGTGTTCAAGAGCTCAGTGCAAGAGGTTCATATCATGTCGCTCGTGTC
TCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGCAGAGCAGGACCCAGATCTCATT
GCTCTTTCTAGGCAGTTCAAAGCTACTGCAATGGAACTAATTTCCGTTCTTGAACAGAAG
CAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAGACAGTTCCTGTGTACAGACTAGCT
GATATTTTTGTGGCTAGCTTTGAAATAAGTTTTGAGGAGCACTTGTCAATGCTGGATTCA
TTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAACTTGTTGACAGGCACCTGCAGGCG
AAGACATTTATGATTATTGAATTAGTTTTCCTTAATTT

consensusID : consensus_13617#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 755
fasta sequence

                              [GAGCCGTCCTCTCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGGTAAGTAGTGGGGGCGGCGTCGTCGTCGGCGCCCCTCGAGCGGATTCCGCGCACCGCGAGATTGGGGGGTTTCACGGTCTCGGGTTGTGTGGGTTTTCTAGGGTGGAATTTTGGGTGGTGGCCGATGGGCTGATTGGGCGCGCGGGGGTTTGGGTGGTGGATGGATTATTAGTCCAAGTTAGGTTTAATCAGCGTGTGGTTGGTAAAATCGCAGTAGCTTAGCTTTGTTTGATGCTATTGTATTGGCT-TAGTCAGCTTAGCTCATGATTCGTGAGGCCTTTTTCTTCGATTTCGTCTGTGGTTTTGTGAATTTGTGTGGAGCAAGTAGAAATTGCTTTTTCTTCTTTTTCTTTTTCTGCTTTTTTGTATTGTAGTCGTCACTTGTTGTTTTCTCGATGGGATGATCTCGTCTGTGATGTGAACAGTTAAAAAGTTTCCAGCGCAGTTTGATGAACTCGCTGAATCCAAAGTGGTTTAGAGCGGCTTTGGTTGCTTTATGGTTGACTAATTCAGCTCCTAATTATATCTGTTTGGTGTTCAAACCTTCTAGGCGTGTTGTACTTACTTGTGGTTCAGATTAGT]

[+] EMBL CB669021             [GAGCCGTCCTCTCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGGTAAGTAGTGGGGGCGGCGTCGTCGTCGGCGCCCCTCGAGCGGATTCCGCGCACCGCGAGATTGGGGGGTTTCACGGTCTCGGGTTGTGTGGGTTTTCTAGGGTGGAATTTTGGGTGGTGGCCGATGGGCTGATTGGGCGCGCGGGGGTTTGGGTGGTGGATGGATTATTAGTCCAAGTTAGGTTTAATCAGCGTGTGGTTGGTAAAATCGCAGTAGCTTAGCTTTGTTTGATGCTATTGTATTGGCT TAGTCAGCTTAGCTCATGATTCGTGAGGCCTTTTTCTTCGATTTCGTCTGTGGTTTTGTGAATTTGTGTGGAGCAAGTAGAAATTGCTTTTTCTTCTTTTTCTTTTTCTGCTTTTTTGTATTGTAGTCGTCACTTGTTGTTTTCTCGATGGGATGATCTCGTCTGTGATGTGAACAGTTAAAAAGTTTCCAGCGCAGTTTGATGAACTCGCTGAATCCAAAGTGGTTTAGAGCGGCTTTGGTTGCTTTATGGTTGACTAATTCAGCTCCTAATTATATCTGTTTGGTGTTCAAACCTTCTAGGCGTGTTGTACTTACTTGTGGTTCAGATTAGT]
[+] EMBL CB631528             [                                                                      ACGCGGCGGAGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGGTAAGTAGTGGGGGCGGCGTCGTCGTCCGCGCCCCTCAAGCGGATTCCGCGCACCGCGAGATTGGGGGGTTTCACGGTCTCGGGTTGTGTGGGTTTTCTATGGTGGAATTATGGGTGGTGGCCGATGGGCTGATTGGGCGCGCGGGGGATTGGGTGGTGGATGGATTATTAGACAAACTTACGCTTAATCAACGTGCGGTTGGTAAAATCTCAGAACCTTAGCTTTGGTTGATGCTATTGTATTGGCTATCATCAGCTTAGCTCATGATTCCTGAG                                                                                                                                                                                                                                                                                                                   ]




>consensus_13617#2
GAGCCGTCCTCTCCTCCACTTCCGTACGATTCCAGCGCGGTGGGGTGGGCGAGGTGCGTG
GCCATGGCGGACGCGGCGGTGGAGCTGCCTGGACGGCTCGCGATACTGCCGTTCCGCAAC
AAGGTGCTCCTCCCGGGGGCCATCGTGCGGATCCGCTGCACCAACCCCAGCAGGTAAGTA
GTGGGGGCGGCGTCGTCGTCGGCGCCCCTCGAGCGGATTCCGCGCACCGCGAGATTGGGG
GGTTTCACGGTCTCGGGTTGTGTGGGTTTTCTAGGGTGGAATTTTGGGTGGTGGCCGATG
GGCTGATTGGGCGCGCGGGGGTTTGGGTGGTGGATGGATTATTAGTCCAAGTTAGGTTTA
ATCAGCGTGTGGTTGGTAAAATCGCAGTAGCTTAGCTTTGTTTGATGCTATTGTATTGGC
TTAGTCAGCTTAGCTCATGATTCGTGAGGCCTTTTTCTTCGATTTCGTCTGTGGTTTTGT
GAATTTGTGTGGAGCAAGTAGAAATTGCTTTTTCTTCTTTTTCTTTTTCTGCTTTTTTGT
ATTGTAGTCGTCACTTGTTGTTTTCTCGATGGGATGATCTCGTCTGTGATGTGAACAGTT
AAAAAGTTTCCAGCGCAGTTTGATGAACTCGCTGAATCCAAAGTGGTTTAGAGCGGCTTT
GGTTGCTTTATGGTTGACTAATTCAGCTCCTAATTATATCTGTTTGGTGTTCAAACCTTC
TAGGCGTGTTGTACTTACTTGTGGTTCAGATTAGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13617#0      GTGTGCTCTCCTCCACCTCCACCCCATAAATATCCCCTTCGTCGTCTTCGTCATCGTCTC 60
consensus_13617#1      ------------------------------------------------------------
consensus_13617#2      ------------------------------------------------------------
                                                                                   

consensus_13617#0      CAACCTCCGATTTCAATTCCAGCGCGGGAGCCGTAATCCCCTCCACTTCCGTACGATTCC 120
consensus_13617#1      --------------------AGCGCGCTTTTAGAAATCCCCTCCACTTCCGTACGATTCC 40
consensus_13617#2      ---------------------------GAGCCGTCCTCTCCTCCACTTCCGTACGATTCC 33
                                                       *   ** *********************

consensus_13617#0      AGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGA 180
consensus_13617#1      AGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACCCCA-AAAGGAGCTGCCTGGA 99
consensus_13617#2      AGCGCGGTGGGGTGGGCGAGGTGCGTGGCCATGGCGGACGCGGCGGTGGAGCTGCCTGGA 93
                       *************************************** *      *************

consensus_13617#0      CGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATC 240
consensus_13617#1      CGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATC 159
consensus_13617#2      CGGCTCGCGATACTGCCGTTCCGCAACAAGGTGCTCCTCCCGGGGGCCATCGTGCGGATC 153
                       ************************************************************

consensus_13617#0      CGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG 300
consensus_13617#1      CGCTGCACCAACCCCAGCAGTGTGAAGCTTGTGGAGCAGGAACTCTGGCAACGGGAGGAG 219
consensus_13617#2      CGCTGCACCAACCCCAGCAG-GTAAGTAGTG-GGGGCGGCGTCGTCGTCGGCG------- 204
                       ******************** ** *    ** ** ** *   *   * *  **       

consensus_13617#0      AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCT 360
consensus_13617#1      AAGGGTCTGATCGGGGTGCTCCCTGTGCATGACTCCGAAGCTGCTGGCTCATTGCTGTCT 279
consensus_13617#2      ------CCCCTCGAGCGGATTCC-GCGC---ACCGCGAGATTGGGGGGTT-TCACGGTCT 253
                             *   *** *  * * ** * **   **  ***   **  ** *  *  * ****

consensus_13617#0      CCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGA 420
consensus_13617#1      CCTGGTGTAGGCAGCGATTCAGGTGAGGGTGGGAGCAAGGCGCCTGGTGGTTCTGCAGGA 339
consensus_13617#2      CGGGTTGTGTG----GGTTTT--CTAGGGTGGAATTTTGGG---TGGTGGC-CGATGGGC 303
                       *  * ***  *    * **      ******* *    **    ******  *    ** 

consensus_13617#0      GAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGA 480
consensus_13617#1      GAATCAACGAAGCAGGATACTAAGAATGGGAAGGAGACCATTCACTGGCACAGCCGGGGA 399
consensus_13617#2      TGATTGGGCGCGCGGGG------GTTTGGGTGGTGGATGGATTATTAGTCCAA------- 350
                         **       ** **       *  ****  *  **    * * * *  **        

consensus_13617#0      GTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACA 540
consensus_13617#1      GTAGCTGCTAGGGCTTTGCACCTTTCCAGAGGTGTGGAGAAACCAAGTGGAAGGGTTACA 459
consensus_13617#2      ------GTTAGGTTTAATCAGCGT----GTGGTTGGTAAAATCGCAGTAGCTTAGCTTTG 400
                             * ****  *   ** * *    * ***  * * ** *  *** *    * *   

consensus_13617#0      TATATTGTCGTCCTTGAAGGTTTATGTAGGTTCAGTGTTCAAGAGCTCAGTGCAAGAGGT 600
consensus_13617#1      TATATTGTCGTCCTTGAAGGTTTATGTAGATTCAGTGTTCAAGAGCTCAGTGCAAGAGGT 519
consensus_13617#2      TTTGATGCTATTGT-ATTGGCTTA-GTCAGCTTAG--CTCATGA--TTCGTGAGGCCTTT 454
                       * *  **   *  *    ** *** **    * **   *** **  *  ***       *

consensus_13617#0      TCATATCATGTCGCTCGTG-TCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGC 659
consensus_13617#1      TCATATCATGTCGCTCGTG-TCTCACGTCTTGATATGACAAAAACGGAGTTGGAGCACGC 578
consensus_13617#2      TTCTTCGATTTCGTCTGTGGTTTTGTGAATTTGTGTGGAGCAAGTAGAAATTGCTTTTTC 514
                       *  *   ** ***   *** * *   *  **  * **    **   **  * *      *

consensus_13617#0      AGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCA--GTTCAAAGCTACTGCAATGGAA 717
consensus_13617#1      AGAGCAGGACCCAGATCTCATTGCTCTTTCTAGGCA--GTTCAAAGCTACTGCAATGGAA 636
consensus_13617#2      TTCTTTTTCTTTTTCTGCTTTTTTGTATTGTAGTCGTCACTTGTTGTTTTCTCGATGGGA 574
                                      *    **     ** *** *     *    * *    * **** *

consensus_13617#0      CTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAG 777
consensus_13617#1      CTAATTTCCGTTCTTGAACAGAAGCAGAAGACAGTTGGTAGGACTAAGGTGCTTCTTGAG 696
consensus_13617#2      TGA--TCTCGTCTGTGATGTGAA--------CAGTTAAAAAGTTTCCAGCGCAGTTTGAT 624
                         *  *  ***   ***   ***        *****   * *  *   * **   **** 

consensus_13617#0      ACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAGGTTTTGAG 837
consensus_13617#1      ACAGTTCCTGTGTACAGACTAGCTGATATTTTTGTGGCTAGCTTTGAAATAAGTTTTGAG 756
consensus_13617#2      GAACTCGCTGAATCCAAAGTGGTTTAGAGCGGCTTTGGTTGCTTTATGGTTGACT----A 680
                         * *  ***  * ** * * * * * *      * * * *****    *    *     

consensus_13617#0      GAGCAGTTGTCAATGCTGGATTCAGTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAA 897
consensus_13617#1      GAGCACTTGTCAATGCTGGATTCATTTGACTTAAAAGTTAGACTTTCCAAGGCAACCGAA 816
consensus_13617#2      ATTCAGCTCCTAAT--TATATCTGTTTGGTGT-----TCAAACCTTCTAGGCGTGTTGTA 733
                          **  *   ***  *  **    ***   *     * * ** *** * *      * *

consensus_13617#0      CTTGTTGACAGGCACCTGCAGTCAATTCTTGTAGCTGAGAAATAACTCAAAAGGTTGAGG 957
consensus_13617#1      CTTGTTGACAGGCACCTGCAGGCGA-----AGACATTTATGATTATTGAATTAGTTTTCC 871
consensus_13617#2      CTTACTTGTGGTTCAGATTAGT-------------------------------------- 755
                       ***  *    *        **                                       

consensus_13617#0      GTCAGCTAT 966
consensus_13617#1      TTAATTT-- 878
consensus_13617#2      ---------