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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13618#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1369 fasta sequence
[ACCTCTGTCCGCTCTCGTCGTGAAAGAAAGCGTGTCACCTATACTTTTGATGATTATGAGCGTTCAATAAATGAAGCCATAAAACCAACAAAGAAAAGTGAGAACTCTTCTGAGTTCATTACTACTTCTAACAGAAGAGTACACCCAAAACGAGAGACAGCGACCAATGGTAGGTTAGCTGGTCCTTCGCCATTATGCAATGGATTCTATGGAGAATATCCACTAAGGTCACATGGCTACCAAGGAAGTGAGTGGGAGAAAAAACCTGAGACTCTCGATCGCAGGCAAAGAAAAAGATCTCGAAGGTACACGCAAGATTTTGTTGAGGCTATCTCGGACGTCGACCCAAACTTCGACAGTGATGATGATATCATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGGCCAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAATGATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATTGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACAACTAGTCAAGACCAGGA-GGAAGAA-GGTGCTGAAGTAAATAAAGAGCGGCCACCCCTGCTTTCTCCTAGCAGGAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTG-ATGAAACACAGAGTCGCAACGGCGAAAGGCGACCAC-CTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG-CGTCAACCTG-ATTGGAGG-TGCTTTTGTCAACTTGGAAGAACCA-AGTGA-AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACCATTAGCTGATCCA-GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA-CTGATGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACATTGTTGGTGTGGCTTGGCCGCTTCAGGATGCAAAAAAAAAAAA]
[+] EMBL CF327297 [ACCTCTGTCCGCTCTCGTCGTGAAAGAAAGCGTGTCACCTATACTTTTGATGATTATGAGCGTTCAATAAATGAAGCCATAAAACCAACAAAGAAAAGTGAGAACTCTTCTGAGTTCATTACTACTTCTAACAGAAGAGTACACCCAAAACGAGAGACAGCGACCAATGGTAGGTTAGCTGGTCCTTCGCCATTATGCAATGGATTCTATGGAGAATATCCACTAAGGTCACATGGCTACCAAGGAATTGAGTGGGAGAAAAAACCTGAGACTCTCGATCGCAGGCAAAGAAAAAGATCTCGAAGGTACACGCAAGATTTTGTTGAGGCTATCTCGGACGTCGACCCAAACTTCGACAGTGATGATGATATCATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGGCCAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAAGAATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATCGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTC ]
[+] EMBL AK059670 [ CCATAAAACCAACAAAGAAAAGTGAGAACTCTTCTGAGTTCATTACTACTTCTAACAGAAGAGTACACCCAAAACGAGAGACAGCGACCAATGGTAGGTTAGCTGGTCCTTCGCCATTATGCAATGGATTCTATGGAGAATATCCACTAAGGTCACATGGCTACCAAGGAAGTGAGTGGGAGAAAAAACCTGAGACTCTCGATCGCAGGCAAAGAAAAAGATCTCGAAGGTACACGCAAGATTTTGTTGAGGCTATCTCGGACGTCGACCCAAACTTCGACAGTGATGATGATATCATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGGCCAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAATGATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATTGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACAACTAGTCAAGACCAGGA GGAAGAA GGTGCTGAAGTAAATAAAGAGCGGCCACCCCTGCTTTCTCCTAGCAGGAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTG ATGAAACACAGAGTCGCAACGGCGAAAGGCGACCAC CTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTGGAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACCATTAGCTGATCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA CTGATGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACATTGTTGGTGTGGCTTGGCCGC ]
[+] EMBL CF329793 [ CCACTAAGGTCACATGGCTACCAAGGAAGTGAGTGGGAGAAAAAACCTGAGACTCTCGATCGCAGGCAAAGAAAAAGATCTTGAAGGTACACGCAAGATTTTGTTGAGGCTATCTCGGACGTCGACCCAAACTTCGACAGTGATGATGATATCATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGG CAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAATGATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATTGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCTACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACA ]
[+] EMBL CA757624 [ ACCTGAGACTCTCGATCGCAGGCAAAGAAAAAGATCTCGAAGGTACACGCAAGATTTTGTTGAGGCTATCTCGGACGTCGACCCAAACTTCGACAGTGATGATGATATCATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGGCCAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAATGATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATTGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACGACTAGTCAAGACCAGGA GGAAGAA GGTGCTGAAGTAAATAAAGAGCGGCCACCCCTGCTTTCTCCTAGCAGGAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTGAATG AACACAGAGTCGCAACGGCGAAAGGGGACCAC CTGGATAACAACTGAGGATCATGCCCTGGGGTTTAGATACTGAGTAACATNGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAAAGCGATAC ACATTATTCATGCCGT AATCTGAATTGGAGn gc ]
[+] EMBL CA765844 [ TATCATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGGCCAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAATGATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATTGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACGACTAGTCAAGACCAGGA GGAAGAA GGTGCTGAAGTAAATAAAGAGCGGCCACCCCTGCTTTCTCCTAGCAGGAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTG ATGAAACACAGAGTCGCAACGGCGAAAGGTGACCAC CTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTTGAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACAATTAGCTGATCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA CTGATGTCTGGCACGCGT ]
[+] EMBL CF330545 [ ATTGGTGAAGCAGTCTATGATGAGGAATATCTTAGAAGTCGAAAGCAATATAAGGCCAGACTTTTAGAACTCGATAAAGAGTTCCAATTGGAACAAGTTGCCGATGATGGTAATGATGAAGTGGAATATCCTTCGAGTACCAGTGAAGATGAAAAGGAGCCCCAACGGTACAAAAGATTGGCTACTTGCAATCCTCGAGGGACCAACTTGAGAACTATCGATGGATTCCAAACATGCATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACAACTAGTCAAGACCAGGAGGGAAGAAGGGTGCTGAAGTAAATAAAGAGCGGCCACCCCTGTTTTCTCCTAGCAGGAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGA ]
[-] EMBL CB629750 [ ATCACACGAAGTAAGCGTTCCACCCGCCCACACATGAAGTATCATCAGTATGATCTTTCTGGCACAGATACAGAATTGGGAAAGCCAGGTAAAATAAAGGTACCAGATCCAGATGCTGGTTCTGATGCACTAAATGACATGGAGCTCTCGACGACTAGTCAAGACCAGGA GGAAGAA GGTGCTGAAGTAAATAAAGAGCGGCCACCCCTGCTTTCTCCTAGCAGGAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTG ATGAAACACAGAGTCGCAACGGCGAAAGGTGACCAC CTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTTGAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACAATTAGCTGATCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA CTGATGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAAgg ]
[+] EMBL AA749704 [ gcnGGCCACCCCTGCTTTCTCCTAGCATTAATAATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTG ATGAAACACAGAGTCGCAACNGCGAAAGGTGACCAC CTGGATAACAACTGAGNATCATGCCCTTNGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGNCCAATGAGCACCCATGAGAGAGCGATAC ]
[-] EMBL CF329792 [ ATGGAAGCGATGGGAGAAGATTTCTTGACTTAAACGAGGTTGCGCCTGTAGGCGGTTTTG ATGAAACACAGAGTCGCAACGGCGAAAGGCGACCAC CTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTGGAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACCATTAGCTGATCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA CTGATGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACATTGTTGGTGTGGCTTGGCCGCTTCAGGATGCAAAAAAAA ]
[-] EMBL CF330546 [ TGCGCCTGTAGGCGGTTTTG ATGAAACACAGAGTCGCAACGGCGAAAGGCGACCAC CTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTGGAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAGTTACCATTAGCTGATCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGAA AAAAAGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATG AAAAAAAATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTTTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACATTGTTGGTGTGGCTTGGCCGCTTCAGGAGGCAAAAAAAAAAAA]
[-] EMBL CF327298 [ CGGTTTTG ATGAAACACAGAGTCGCAACGGCGAAAGGCGACCACTCTGGATAACAACTGAGGATCATGCCCTTGGGTTTAGATACTGAGTAACATTGTTGATCCATCAGGGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTGGAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACCATTGGCTGATCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA CTGATGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACATTGTTGGTGTGGCTTGGCCGCTTCAGGATGCAAAA ]
[+] EMBL C96817 [ GCCCTTGGNTTTAGATACTGAGTAACATTGTTGATCCATCAGAGGCCAATGAGCACCCATGAGAGAGCGATACAACATCATTCATG CGTCAACCTG ATTGNAGG TGCTTTTGTCAACTTGGAAGAACCA AGTGA AGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACCATTAGCTGANCCA GTCTGATGATTGTAGACCATGGTGAGATGTGTGCA CTGATGTCTGGCACGCGTCAACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTNATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACATTGTTGGTGTGGCTTGGCCGCTTCAGGATGCAttctctg ]
[+] EMBL BI796429 [ TCATG CGTCAACCTG ATTTGAGGTTGCTTTTGTCAACTTGGAAGAACCACAGTGATAGAAACGATATGGTCCATCATAAGTGCAGCTGTAGAATTACCATTAGCTGATCCACGTCTGATGATTGTAGACCCTGGTGAGATGTGTGCACCTGATGTCTGGCACGCGTCCACTGATAGCGTATTAGCGTATGCGTGTTAGATTGCCATTTTTCTTCTTCTTTTTGAGTCATTGTCACATTGTTGTTTCACCCCGGCTACATATGCTTGCGAAATCGCGAGGCCTAAATGAGTAACCTTGTTGGTGTGGCTTGCCCGCTTCAGGATGCCAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||