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Oryza sativa
cluster # 1362 cluster # 1362       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1362#0 length = 1436 sequences # 2  

consensusID : consensus_1362#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1436
fasta sequence
                              [GGCGTACCGGCACCTTCGATGGCGGCCACCAAGCCCCCGAGCTGCTCCACCCGCCTCAGATCTCCGGCCACCACCGCCGCCTGCTTCCTCCCGGCGTCCCTCCTTCTCTTCCTCCTCCTCCTCCTCCTCCGCCGCCCTCCCATGGGCTCCTTCCCTCCCACAATTCCAGGTGGCTCCGTGTCGTCGCGGCGGGCGGAGCTGTACGGGAGGATGGCGAGGGACCTCGACGAGCGCGGCGCGGCGTTCTTGGACGGCGGCGAGACGTCGCAGTCGCTCACGCTGTCGGAGCTCTTCGACACCAGGGACGGCGCCGTCGTGCCCATGCTCAAGGCTGCCAACCCGCCGGTGCGCGCGAATGTGCTCTACCTGGATCCTGAGTTTGCTTCCGTGATATCGAAGGCTGTGAAGGAAGTGTTTCTTCCTTATTTTAATCAAGCTATCTGGTTCCAAAATATGAGCATCTACCACTTCAGTATGTTTCACACGTCGCATCACCTGGAACCAATTGTAGCAACTGAAGATGAGATTGAAGCTGAAGTGGATGCTGTAAAAAGAGTCACCGACGATGTTTGTCCACTTAAAATTATCTTGGATCAAGTGGTTTTGACATCAACTGGAGTGCTTCTTGGCCTGTGGCAGGTTGAATCTGGTACTGATCCCGCTGATATCCGCTCAAGATTGAGAGAAGCTCTTCCTCGTGCACCCCAAAAGCAGCTTTATGATCCTGTTATGCTTCACACCTCTTTGGCACGTATTCTGGGACATCCAAAGCTCCCACAAGAGGGTAATGCACAGTCTCTTGATCATGTCAAGTTCTTCCATGACCTGGTTGCACAGGTTAATTCAAAAATCCGTGGCTTCCAGGCCACGGTAAAAGAGCTATGGTTTGTAGAAGAGTATGATGTACTTGCGCTGGCATTGAACGGAAAGATGAAGGTACGGAGGCTCCAATTCGGTTGCAAAGAAGGTCAAGGCAATGGAAAAATATAGAGAGAATTACCGACGGGAACAGTGCAATATACTTGGAGCACCCAAGGGTAATGTTGTTCGAATGGCTCACCTAAAACATCATCCACGCCGTCATTTGATCTGCCGAGCTATACAATAGATGTGTTGGGCGACTGGGAATGCGACAAAGTGATGACAGATTGCAACACATACTTGTGCAGAAAATCGTATGCAACCATATGTATGTAATTTCTTTCGCTGTGAAGGTATGCCACATTGTGTTGTACCTGTGATGTTCTCTAATTTTTTGTGTCTATTTATGCTCCATTTTCTAGCATATGGAGACAGTGTACCAATAGAAACTCCAAAATTTGCTGTACATTTTTAGGGGAAGAAAGGCCATTCAGGAAGACGAGTCTTCACTTTATATACAGAATTGTTATTCTTCAGGTGTAGGAATACACAAATTTCTCCATACCATTGGGACC]

[+] EMBL AK071278             [GGCGTACCGGCACCTTCGATGGCGGCCACCAAGCCCCCGAGCTGCTCCACCCGCCTCAGATCTCCGGCCACCACCGCCGCCTGCTTCCTCCCGGCGTCCCTCCTTCTCTTCCTCCTCCTCCTCCTCCTCCGCCGCCCTCCCATGGGCTCCTTCCCTCCCACAATTCCAGGTGGCTCCGTGTCGTCGCGGCGGGCGGAGCTGTACGGGAGGATGGCGAGGGACCTCGACGAGCGCGGCGCGGCGTTCTTGGACGGCGGCGAGACGTCGCAGTCGCTCACGCTGTCGGAGCTCTTCGACACCAGGGACGGCGCCGTCGTGCCCATGCTCAAGGCTGCCAACCCGCCGGTGCGCGCGAATGTGCTCTACCTGGATCCTGAGTTTGCTTCCGTGATATCGAAGGCTGTGAAGGAAGTGTTTCTTCCTTATTTTAATCAAGCTATCTGGTTCCAAAATATGAGCATCTACCACTTCAGTATGTTTCACACGTCGCATCACCTGGAACCAATTGTAGCAACTGAAGATGAGATTGAAGCTGAAGTGGATGCTGTAAAAAGAGTCACCGACGATGTTTGTCCACTTAAAATTATCTTGGATCAAGTGGTTTTGACATCAACTGGAGTGCTTCTTGGCCTGTGGCAGGTTGAATCTGGTACTGATCCCGCTGATATCCGCTCAAGATTGAGAGAAGCTCTTCCTCGTGCACCCCAAAAGCAGCTTTATGATCCTGTTATGCTTCACACCTCTTTGGCACGTATTCTGGGACATCCAAAGCTCCCACAAGAGGGTAATGCACAGTCTCTTGATCATGTCAAGTTCTTCCATGACCTGGTTGCACAGGTTAATTCAAAAATCCGTGGCTTCCAGGCCACGGTAAAAGAGCTATGGTTTGTAGAAGAGTATGATGTACTTGCGCTGGCATTGAACGGAAAGATGAAGGTACGGAGGCTCCAATTCGGTTGCAAAGAAGGTCAAGGCAATGGAAAAATATAGAGAGAATTACCGACGGGAACAGTGCAATATACTTGGAGCACCCAAGGGTAATGTTGTTCGAATGGCTCACCTAAAACATCATCCACGCCGTCATTTGATCTGCCGAGCTATACAATAGATGTGTTGGGCGACTGGGAATGCGACAAAGTGATGACAGATTGCAACACATACTTGTGCAGAAAATCGTATGCAACCATATGTATGTAATTTCTTTCGCTGTGAAGGTATGCCACATTGTGTTGTACCTGTGATGTTCTCTAATTTTTTGTGTCTATTTATGCTCCATTTTCTAGCATATGGAGACAGTGTACCAATAGAAACTCCAAAATTTGCTGTACATTTTTAGGGGAAGAAAGGCCATTCAGGAAGACGAGTCTTCACTTTATATACAGAATTGTTATTCTTCAGGTGTAGGAATACACAAATTTCTCCATACCATTGGGACC]
[+] EMBL CA754058             [                                                                                                                                                                                                                                                                                                                                                                                                                                            TAATCAAGCTATCTGGTTCCAAAATATGAGCATCTACCACTTCAGTATGTTTCACACGTCGCATCACCTGGAACCAATTGTAGCAACTGAAGATGAGATTGAAGCTGAAGTGGATGCTGTAAAAAGAGTCACCGACGATGTTTGTCCACTTAAAATTATCTTGGATCAAGTGGTTTTGACATCAACTGGAGTGCTTCTTGGCCTGTGGCAGGTTGAATCTGGTACTGATCCCGCTGATATCCGCTCAAGATTGAGAGAAGCTCTTCCTCGTGCACCCCAAAAGCAGCTTTATGATCCTGTTATGCTTCACACCTCTTTGGCACGTATTCTGGGACATCCAAAGCTCCCACAAGAGGGTAATGCACAGTCTCTTGATCATGTCAAGTTCTTCCATGACCTGGTTGCACAGGTTAATTCAAAAATCCGTGGCTTCCAGGCCACGGTAAAAGAGCTATGGTTTGTAGAAGAGTATGATGTACTTGCGCTGGCATTGAACGGAAAGATGAAGGTACGGAGGCTCCAATTCGGTTGCAAAGAAGGTCAAGGCAATGGAAAAATATAGAGAGAATTACCGACGGGAACAGTGCAATATACTTGNAGCACCCAA                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_1362#0 GGCGTACCGGCACCTTCGATGGCGGCCACCAAGCCCCCGAGCTGCTCCACCCGCCTCAGA TCTCCGGCCACCACCGCCGCCTGCTTCCTCCCGGCGTCCCTCCTTCTCTTCCTCCTCCTC CTCCTCCTCCGCCGCCCTCCCATGGGCTCCTTCCCTCCCACAATTCCAGGTGGCTCCGTG TCGTCGCGGCGGGCGGAGCTGTACGGGAGGATGGCGAGGGACCTCGACGAGCGCGGCGCG GCGTTCTTGGACGGCGGCGAGACGTCGCAGTCGCTCACGCTGTCGGAGCTCTTCGACACC AGGGACGGCGCCGTCGTGCCCATGCTCAAGGCTGCCAACCCGCCGGTGCGCGCGAATGTG CTCTACCTGGATCCTGAGTTTGCTTCCGTGATATCGAAGGCTGTGAAGGAAGTGTTTCTT CCTTATTTTAATCAAGCTATCTGGTTCCAAAATATGAGCATCTACCACTTCAGTATGTTT CACACGTCGCATCACCTGGAACCAATTGTAGCAACTGAAGATGAGATTGAAGCTGAAGTG GATGCTGTAAAAAGAGTCACCGACGATGTTTGTCCACTTAAAATTATCTTGGATCAAGTG GTTTTGACATCAACTGGAGTGCTTCTTGGCCTGTGGCAGGTTGAATCTGGTACTGATCCC GCTGATATCCGCTCAAGATTGAGAGAAGCTCTTCCTCGTGCACCCCAAAAGCAGCTTTAT GATCCTGTTATGCTTCACACCTCTTTGGCACGTATTCTGGGACATCCAAAGCTCCCACAA GAGGGTAATGCACAGTCTCTTGATCATGTCAAGTTCTTCCATGACCTGGTTGCACAGGTT AATTCAAAAATCCGTGGCTTCCAGGCCACGGTAAAAGAGCTATGGTTTGTAGAAGAGTAT GATGTACTTGCGCTGGCATTGAACGGAAAGATGAAGGTACGGAGGCTCCAATTCGGTTGC AAAGAAGGTCAAGGCAATGGAAAAATATAGAGAGAATTACCGACGGGAACAGTGCAATAT ACTTGGAGCACCCAAGGGTAATGTTGTTCGAATGGCTCACCTAAAACATCATCCACGCCG TCATTTGATCTGCCGAGCTATACAATAGATGTGTTGGGCGACTGGGAATGCGACAAAGTG ATGACAGATTGCAACACATACTTGTGCAGAAAATCGTATGCAACCATATGTATGTAATTT CTTTCGCTGTGAAGGTATGCCACATTGTGTTGTACCTGTGATGTTCTCTAATTTTTTGTG TCTATTTATGCTCCATTTTCTAGCATATGGAGACAGTGTACCAATAGAAACTCCAAAATT TGCTGTACATTTTTAGGGGAAGAAAGGCCATTCAGGAAGACGAGTCTTCACTTTATATAC AGAATTGTTATTCTTCAGGTGTAGGAATACACAAATTTCTCCATACCATTGGGACC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)