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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2933 fasta sequence
[AAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGCGGCGGCGGTGGCCGTCGTCTTCGTCGGCGGCGGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGCGCGCGGAGGCGCTGGTGAAGCACTACGTGGAGCAGCACGTCCCCCTCGCCCCCTCCGTCGCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGGGTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGTCGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCGCTCGCCACCCGCGACGCCATCTCCGTCATCGGCGGGCCGTTCTGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGTAAACTAACTATTCACTCTTCCATATATTAATTTCAGTATTAATTTCACCATCCATTTCAGAGTTCAGACTTCACCATCAATAGTATTTCCTTCGTTCCAAAACAACTATAAGTTTCCGCGCACAACTTTAATCGTCCATCTTATTTAAAATTTTTTTATAATTAGTATTTTTGTTATTATAAGATGATAAAACATGAATAATATTTTACTCGTAACTTATGTTTTTAATTTTTTTCAAAAAAAAATTCAAATAAGACGGACGGTCAAAGTTGAACGCGGAAAACCATGGCTGTACTTAAAATGGGACGGAGGGAGTAAACATTTTTAGACTTTGACATAGTCTTTGAGATGGTATTTTGATCAACAATATCTATAAAAGTGAGATGTTTTAAATAAAAAAAAGTTGTAATAGTTTGTTAATGATAAGTCTAGTAACATCAATTTTACATGATTGATTTTTTTTTATTTTTTTACTATTAATAGTTAAAATTAAAAATGTTTGACTTGACACTATTCTAAAATTGCTTATATTTTGAAAATTAGTTGCGGTCGATCAAAACCCCAGTTTCAGCTTATGACAGCATCGTTTCTGAAAAGAAAAGTAAAACCATTCACCTAAGCTAATGATTGGTTAACTTGACACAAACGGCAGCCAAAGATCGATTTTCACGTTATATCCTAATTAAGTCGATTGATTACTAGTCTTCAGGATACACAACTCGATCAGGTTTGGTGTTTTATCTAGCTTGATGTAGCTAGCTATGTGGTGTTTGCAAATGCGTAGTACAAGCCACCGACAAATAGTGAATTGGTGATGTGATATCGTGCTGCAAAATCTGCAATATGCAGAGAACGATAGTTAACTTTTGCAAATTCTTTGTGTGTTGAGTCGGCAACTAGGACACGCTCTCACTCTCACTCACATCACACCCCAGTAATGCTGTCCCCAAAGATTCAGAAGATGAAAGATATATAGCCTCAATCACACCGATTTCCATGTAGTAACAATACTAACAAACAACGATCCTAATAGGAACACTACAGATGCAGAATTTCTATCCATTATCTAAAAAACTCTCGTGCCACGACAATCCAGAATTGAACAGACAGCTACGTCCAACAGGGAGGGTTGGATCTACTTAATTCATAGAAGGCCAAAACTTAGCTGAATCTTGTTCACGGGTATCGCATCAAATCAAAGTTAAAAACAGTTTAGTAGGTATAGCGATCTAACCAACAGATAACGAGGCTTTTGGTTGACGGCTGGCAAGTCTGTTCCGTGCAATAAAATGCAATTCATAACACTGCACTATAACAAATATATCTTATAGAGATATTTTCATTTTTCTAATACTATAGAGGCATTTTTAAAATGCCTTTACAATGTTATAGAGACATTTTGAAGAGTGTCTCATAAGTGCCTTTTGGTGAATTGTCGCATTTTTAAAATGCCTTTACAGTGTTATAGAGACATTTTGAAGAGTGTCTCATAAATACCTTTTGGTGAATTGTCTCTACAAACTAAGAGGTGAATTGTCTCTACGAACTAAGAGGACATTTTGAAGAGTATCTCATAAGTGCCTTTTGGTGAATTGTTTCTACGAACTAAGAGGCATTTTATAAGATGTCTCTATGCAAATAGAGGCACGCACTAACCATCTCAACCTCATATAATTATATGTAAGTATGTGATTTGTGTTACTTATATCTAGTTACTTGATATATATTAATATTTGAAAAAATGCCTTTACATCGTTTTAAATGCCTTAAGAAAATGCATTTACATATGAGACAAATTTTAAAGTGCCGAAAATGTGTCTCTACGAGATAAACTTAACAAAGTATACTAAAAATGTCTCTAGAGTAAAAATATTTTAGACGATTTTGAAAGTGCCTCTAAAAAGTGTCTCTAGACTATAGAGCTTCAAAACTTAGAGGCATTTTAAAAATTGTCTCTACAAAAGATTCTTTATATAAGGTTTTTGATGTAGTGCTGTTTTATTTAGAGAGTGTAGCACAGATATTGACACACTAACTGACCAAGATTTTTATTAACGTTAGTGGTTAAAGGTGTGCAAAAAATGCCAAGACAAACATTCAGCTCTTGTACTGTCCTGTATCTGTACTTGTGAGTTAGTAGCAAATTAGTAGCTAGCTAGATTCTATAAAAGGGGGGAAGTGATGCAGCTTATATAAGGGAGAAACGTGATGTAACTGGCCTCCTACTTCTCTGAGAGAGTGACTATTTACTAATCCTTAATTTGAAAGATCAAGAAATGAGTTACATTGTATTTATTCAATGTGTAAAAGCTGAAATAATATATACATACA]
[+] EMBL AK071908 [AAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGCGGCGGCGGTGGCCGTCGTCTTCGTCGGCGGCGGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGCGCGCGGAGGCGCTGGTGAAGCACTACGTGGAGCAGCACGTCCCCCTCGCCCCCTCCGTCGCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGGGTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGTCGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCGCTCGCCACCCGCGACGCCATCTCCGTCATCGGCGGGCCGTTCTGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGTAAACTAACTATTCACTCTTCCATATATTAATTTCAGTATTAATTTCACCATCCATTTCAGAGTTCAGACTTCACCATCAATAGTATTTCCTTCGTTCCAAAACAACTATAAGTTTCCGCGCACAACTTTAATCGTCCATCTTATTTAAAATTTTTTTATAATTAGTATTTTTGTTATTATAAGATGATAAAACATGAATAATATTTTACTCGTAACTTATGTTTTTAATTTTTTTCAAAAAAAAATTCAAATAAGACGGACGGTCAAAGTTGAACGCGGAAAACCATGGCTGTACTTAAAATGGGACGGAGGGAGTAAACATTTTTAGACTTTGACATAGTCTTTGAGATGGTATTTTGATCAACAATATCTATAAAAGTGAGATGTTTTAAATAAAAAAAAGTTGTAATAGTTTGTTAATGATAAGTCTAGTAACATCAATTTTACATGATTGATTTTTTTTTATTTTTTTACTATTAATAGTTAAAATTAAAAATGTTTGACTTGACACTATTCTAAAATTGCTTATATTTTGAAAATTAGTTGCGGTCGATCAAAACCCCAGTTTCAGCTTATGACAGCATCGTTTCTGAAAAGAAAAGTAAAACCATTCACCTAAGCTAATGATTGGTTAACTTGACACAAACGGCAGCCAAAGATCGATTTTCACGTTATATCCTAATTAAGTCGATTGATTACTAGTCTTCAGGATACACAACTCGATCAGGTTTGGTGTTTTATCTAGCTTGATGTAGCTAGCTATGTGGTGTTTGCAAATGCGTAGTACAAGCCACCGACAAATAGTGAATTGGTGATGTGATATCGTGCTGCAAAATCTGCAATATGCAGAGAACGATAGTTAACTTTTGCAAATTCTTTGTGTGTTGAGTCGGCAACTAGGACACGCTCTCACTCTCACTCACATCACACCCCAGTAATGCTGTCCCCAAAGATTCAGAAGATGAAAGATATATAGCCTCAATCACACCGATTTCCATGTAGTAACAATACTAACAAACAACGATCCTAATAGGAACACTACAGATGCAGAATTTCTATCCATTATCTAAAAAACTCTCGTGCCACGACAATCCAGAATTGAACAGACAGCTACGTCCAACAGGGAGGGTTGGATCTACTTAATTCATAGAAGGCCAAAACTTAGCTGAATCTTGTTCACGGGTATCGCATCAAATCAAAGTTAAAAACAGTTTAGTAGGTATAGCGATCTAACCAACAGATAACGAGGCTTTTGGTTGACGGCTGGCAAGTCTGTTCCGTGCAATAAAATGCAATTCATAACACTGCACTATAACAAATATATCTTATAGAGATATTTTCATTTTTCTAATACTATAGAGGCATTTTTAAAATGCCTTTACAATGTTATAGAGACATTTTGAAGAGTGTCTCATAAGTGCCTTTTGGTGAATTGTCGCATTTTTAAAATGCCTTTACAGTGTTATAGAGACATTTTGAAGAGTGTCTCATAAATACCTTTTGGTGAATTGTCTCTACAAACTAAGAGGTGAATTGTCTCTACGAACTAAGAGGACATTTTGAAGAGTATCTCATAAGTGCCTTTTGGTGAATTGTTTCTACGAACTAAGAGGCATTTTATAAGATGTCTCTATGCAAATAGAGGCACGCACTAACCATCTCAACCTCATATAATTATATGTAAGTATGTGATTTGTGTTACTTATATCTAGTTACTTGATATATATTAATATTTGAAAAAATGCCTTTACATCGTTTTAAATGCCTTAAGAAAATGCATTTACATATGAGACAAATTTTAAAGTGCCGAAAATGTGTCTCTACGAGATAAACTTAACAAAGTATACTAAAAATGTCTCTAGAGTAAAAATATTTTAGACGATTTTGAAAGTGCCTCTAAAAAGTGTCTCTAGACTATAGAGCTTCAAAACTTAGAGGCATTTTAAAAATTGTCTCTACAAAAGATTCTTTATATAAGGTTTTTGATGTAGTGCTGTTTTATTTAGAGAGTGTAGCACAGATATTGACACACTAACTGACCAAGATTTTTATTAACGTTAGTGGTTAAAGGTGTGCAAAAAATGCCAAGACAAACATTCAGCTCTTGTACTGTCCTGTATCTGTACTTGTGAGTTAGTAGCAAATTAGTAGCTAGCTAGATTCTATAAAAGGGGGGAAGTGATGCAGCTTATATAAGGGAGAAACGTGATGTAACTGGCCTCCTACTTCTCTGAGAGAGTGACTATTTACTAATCCTTAATTTGAAAGATCAAGAAATGAGTTACATTGTATTTATTCAATGTGTAAAAGCTGAAATAATATATACATACA]
consensusID : consensus_13621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1314 fasta sequence
[AGAGAAAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGC-GGCGGCGGTGGCCGTCGTCTTCGTCGGCGGC-GGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGC-GCGCGGAGGCGCTGGTGAAGCACTAC-GTGG-AGCAGCAC-GTCCCCCTCGCCCCCTCCGTC-GCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGG-GTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGT-CGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCC-GACATCCTCGCGCTCGCCA-CCCG-CGACGCCATCTCCGTCATCGGCGGGCCGTTC-TGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCACACGATCGGCATCGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT----TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATTTCAATTATAGAAAATAATTCACTTTTTA---ATAGATATTTAATGTTTAGGATAATATTCTTTTAAAGTATCATTAATATTATATTAA]
[+] EMBL AK061308 [AGAGAAAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGC GGCGGCGGTGGCCGTCGTCTTCGTCGGCGGC GGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGC GCGCGGAGGCGCTGGTGAAGCACTAC GTGG AGCAGCAC GTCCCCCTCGCCCCCTCCGTC GCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGG GTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGT CGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCC GACATCCTCGCGCTCGCCA CCCG CGACGCCATCTCCGTCATCGGCGGGCCGTTC TGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCACACGATCGGCATCGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATT ]
[+] EMBL AK070917 [ AAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGC GGCGGCGGTGGCCGTCGTCTTCGTCGGCGGC GGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGC GCGCGGAGGCGCTGGTGAAGCACTAC GTGG AGCAGCAC GTCCCCCTCGCCCCCTCCGTC GCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGG GTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGT CGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCC GACATCCTCGCGCTCGCCA CCCG CGACGCCATCTCCGTCATCGGCGGGCCGTTC TGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCACACGATCGGCATCGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGT CAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATTTCAATTATAGAAAATAA ]
[+] EMBL AK106002 [ AGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGC GGCGGCGGTGGCCGTCGTCTTCGTCGGCGGC GGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGC GCGCGGAGGCGCTGGTGAAGCACTAC GTGG AGCAGCAC GTCCCCCTCGCCCCCTCCGTC GCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGG GTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGT CGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCC GACATCCTCGCGCTCGCCA CCCG CGACGCCATCTCCGTCATCGGCGGGCCGTTC TGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCACACGATCGGCATCGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATTTCAATTATAGAAAATAA ]
[+] EMBL AU064009 [ TAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGTGGC GGCGGCGGTGGCCGTCGTCTTCGTCGGCGGC GGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGC GCGCGGAGGC CTGGTGAAGCACTAC GTGG AGCAGCAC GTCCCCCTCGCCCCCTCCGTC GCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGG GTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCG CTTCATCGACCGCATCAAGAGCGTGGT CGANAACGAGTGCCCCGGCGTCGTCTCCTGCGCC GACATCTTCGCGCTCGCAA CCCG CGAAGCAATCTCCGTAATCGGCGGG CGTTCTTGGCGGTTGcc ]
[+] EMBL CB654189 [ TGACGTTGGTGGTGGTGGC GGCGGCGGTGGCCGTCGTCTTCCTCGGCGGC GGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGC GCGCGGAGGCCCTGGTGAAGCACTAC TTGG AGCAGCAC GTCCCCCTCGCCCCCTCCGTC GCCGCCACCCTCATCCGCACCCACTTCCACCACTGCTTCGTCAGGGG GTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGT CCAGAGCGAGTGCCCCGGCGTCCTCTCCTGCGCC GACATCCTCGCGCTCGCCA CCCG CGACGCCATCTCCGTCATCGGCGGGCCGTTC TGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCATGAGGCGCTGGACCATATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCA ]
[+] EMBL AU173033 [ TGGTGGTGGTGGCAGGCGGCGGTGGCCGTCGTCTTCGTCGGCGGCAGGCGTGGAGGGGTGGGTGCTCAAGGAGGGGTTCTACGAGCAGAGCTGCCCGCAGCGCGGAGGCGCTGGTGAAGCACTACAGAGGNNTTTTTTCTGTCCCCCTCGCCCCCTCCGTCAGCCGCCACCCTCATCCGCACCCACTTCCACGACTGCTTCGTCAGGGGANAGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGAGAAGGACGCGGCGCCGAACCTGACACTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGTCCGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCCAAACATCCTCGCGCTCGCCACCCCGTAGACGCCAT ]
[+] EMBL CB630359 [ ACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAGCGTGGT CGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCC GACATCCTCGCGCTCGCCA CCCG CGACGCCATCTCCGTCATCGGCGGGCCGTTC TGGCGGGTGGCGACGGGGCGGCGCGACGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTTCACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCACACGATCGGCATCGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAGGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGCCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTGGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTC ]
[-] EMBL CB630360 [ GGGCCTCGACCTCGCCGACCTCATCTGGTTGTCAGGGGCGCACACGATCGGCATCGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAGGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGCCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTGGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTATTCTCTCTCTCTCTCTCTGTAATTTTGTTTCCAAATTGTAACTG AGGATTTTGGAGCAACTGTAACTATTTCTGTAaaaaaaaa ]
[-] EMBL CB666837 [ ggcacgaggGCGCACTGCAACTCGTTCAGCAAGCGGCTGTACAACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCGCCCTTGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGGGGATATTTCAATTATAGAAAATAATTCACTTTTTAGTCATAGATATTTAATGTTTAGGATAATATTCTTTTAAAGTATCATTAATATTATATTA ]
[+] EMBL CB666836 [ AACTCGCTCTGCAAGCGGCTGTACAACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGACGCGGAGTACGCGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGACGATCGTGGAGATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGGCCTCCTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATTTCAATTATAGAAAATAATTCACTTTTTAGTCATAGATATTTAATGTTTAGGATAATATTCAGATTAATTATCATTAATATTATATTAA]
[+] EMBL AU223202 [ CGGTCTCTTCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCATCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATTTCAATTATAGAAAATAATTCACTTTTTA Aaaaaaa ]
[+] EMBL AU173034 [ TCCAGTCCGACGCCGCCCTCGTCACCGACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGAGGTGTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGGCTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTATCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAAATATATATACATGTAACTTAATTCGATCGTCANCCTGTTTAT TCTCTCTCTCTATGTAATTTTGTTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGTAACTATTTCTGTATGTGCCCATGAATATATTTCAATTATAGAAAATAATTCACTTTTTAgtcaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13621#0 -----AAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGT 55
consensus_13621#1 AGAGAAAGCAGCTTTGAGCTTAGCTATGGCAATGGCCGCGCCGCTGACGTTGGTGGTGGT 60
*******************************************************
consensus_13621#0 GGCGGCGGCGGTGGCCGTCGTCTTCGTCGGCGGCGGCGTGGAGGGGTGGGTGCTCAAGGA 115
consensus_13621#1 GGCGGCGGCGGTGGCCGTCGTCTTCGTCGGCGGCGGCGTGGAGGGGTGGGTGCTCAAGGA 120
************************************************************
consensus_13621#0 GGGGTTCTACGAGCAGAGCTGCCCGCGCGCGGAGGCGCTGGTGAAGCACTACGTGGAGCA 175
consensus_13621#1 GGGGTTCTACGAGCAGAGCTGCCCGCGCGCGGAGGCGCTGGTGAAGCACTACGTGGAGCA 180
************************************************************
consensus_13621#0 GCACGTCCCCCTCGCCCCCTCCGTCGCCGCCACCCTCATCCGCACCCACTTCCACGACTG 235
consensus_13621#1 GCACGTCCCCCTCGCCCCCTCCGTCGCCGCCACCCTCATCCGCACCCACTTCCACGACTG 240
************************************************************
consensus_13621#0 CTTCGTCAGGGGGTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGA 295
consensus_13621#1 CTTCGTCAGGGGGTGCGACGCGTCGGTGTTGCTGAACGGGACGGACGGGGCGGAGGCGGA 300
************************************************************
consensus_13621#0 GAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAG 355
consensus_13621#1 GAAGGACGCGGCGCCGAACCTGACGCTGCGGGGGTTCGCCTTCATCGACCGCATCAAGAG 360
************************************************************
consensus_13621#0 CGTGGTCGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCGCTCGCCAC 415
consensus_13621#1 CGTGGTCGAGAGCGAGTGCCCCGGCGTCGTCTCCTGCGCCGACATCCTCGCGCTCGCCAC 420
************************************************************
consensus_13621#0 CCGCGACGCCATCTCCGTCATCGGCGGGCCGTTCTGGCGGGTGGCGACGGGGCGGCGCGA 475
consensus_13621#1 CCGCGACGCCATCTCCGTCATCGGCGGGCCGTTCTGGCGGGTGGCGACGGGGCGGCGCGA 480
************************************************************
consensus_13621#0 CGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTT 535
consensus_13621#1 CGGGAGGGTGTCGATCAAGCAGGAGGCGCTGGACCAGATCCCGGCGCCGACCATGAACTT 540
************************************************************
consensus_13621#0 CACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTT 595
consensus_13621#1 CACCGACCTCCTCTCCTCCTTCCAGAGCAAGGGCCTCGACCTCGCCGACCTCATCTGGTT 600
************************************************************
consensus_13621#0 GTCAGGTAAACTAACTATTCACTCTTCCATATATTAATTTCAGTATTAATTTCACCATCC 655
consensus_13621#1 GTCAGGGGCGCACACGATCGGCA-TCGCGCACTGCAACTCG---------TTCAGCAAGC 650
****** * ** ** * * * * ** * **** ** *
consensus_13621#0 ATTTCAGAGTTCAGACTTCACCATCAATAGTATTTCCTTCGTTCCAAAACAACTATAAGT 715
consensus_13621#1 GGCT----GTACA-ACTTCACCGGGAAAGGCGGCCCCGGCGACGCGGACCCGTCGCTGGA 705
* ** ** ******** ** * ** ** * * * *
consensus_13621#0 TTCCGCGCACAACTTTAATCGTCCATCTTATTTAAAATTTTTTTATAATTAGTATTTTTG 775
consensus_13621#1 CGCGGAGTACG-CGGCGAACCTGCGGCGGAGCAAGTGCGCGGCGCCGTCGGACAACACGA 764
* * * ** * * * * * * * * *
consensus_13621#0 TTATTATAAGATGATAAAACATGAATAATATTTTACTCGTAACTTATGTTTTTAATTTTT 835
consensus_13621#1 CGATCGTGGA--GATGGACCCGGGCAGCTTCCTCACCTTCGACCTGGGCTACTACCGCGG 822
** * *** * * * * * ** ** * * * **
consensus_13621#0 TTCAAAAAAAAATTCAAATAAGACGGACGGTCAAAGTTGAACGCGGAAAACCATGGCTGT 895
consensus_13621#1 CCTC--------CTCAGGCGCCGCGGTCTCTTCCAGTCCGACGCCG----CCCTCGTCAC 870
*** *** * * *** **** * ** * *
consensus_13621#0 ACTTAAAATGGGACGGAGGGAGTAAACATTTTTAGACTTTGACATAGTCTTTGAGATGGT 955
consensus_13621#1 C-----GACGCCGCCGCGGAGGCCAACATCGCCAGCGTGGTGTCCAGCCCGCCGGA-GGT 924
* * * * ** * ***** ** * ** * ** ***
consensus_13621#0 ATTTTGATCAACAATATCTATAAAAGTGAGATGTTTTAAATAAAAAAAAGTTGTAATAGT 1015
consensus_13621#1 GTTCTTCCAGGTGTTCGCGAGGTCCATGGCGAAGCTGGGCATGGTCGGCGTCAAGACCGG 984
** * * * * ** * ** * *
consensus_13621#0 TTGTTAATGATAAGTCTAGTAACATCAATTTTACATGATTGATTTTTTTTTATTTTTTTA 1075
consensus_13621#1 CTCCGAGGGCGAGATCAGGAAGCACTGCGCCCTCGTCAACGACATCCACTACTAGTATTA 1044
* * * * ** * * ** * * * ** * * * * ***
consensus_13621#0 CTATTAATAGTTAAAATTAAAAATGTTTGA--CTTGACACTATTCTAAAATTGCTTATAT 1133
consensus_13621#1 TCACTAGCTCATCGATCTTCAGCTCCTCGGTGCTTGATAAAATTTCAGTAGAA---ATAT 1101
* ** * * * * * * * ***** * *** * * ****
consensus_13621#0 TTTGAAAATTAGTTGCGGTCGATCAAAACCCCAGTTTCAGCTTATGACAGCATCGTTTCT 1193
consensus_13621#1 ATATACATGTAACTTAATTCGATCGTCATCCTGTTTATTCTCTCTCTCTATGTAATTTTG 1161
* * * ** * ****** * ** ** * * * * ***
consensus_13621#0 GAAAAGAAAAGTAAAACCATTCACCTAAGCTAATGATTGGTTAACTTGACACAAACGGCA 1253
consensus_13621#1 TTTCCAAATTGTAACTGTTTTATTTTGGAGCAACTGT-AACTATTTCTGTATGTGC---- 1216
** **** ** * ** * ** * * *
consensus_13621#0 GCCAAAGATCGATTTTCACGTTATATCCTAATTAAGTC---GATTGATTACTAGTCTTCA 1310
consensus_13621#1 -CCATGAATATATTTCAATTATAGAAAATAATTCACTTTTTAATAGATATTTAATGTTTA 1275
*** ** **** * ** * ***** * * ** *** ** * ** *
consensus_13621#0 GGATACACAACTCGATCAGGTTTGGTGTTTTATCTAGCTTGATGTAGCTAGCTATGTGGT 1370
consensus_13621#1 GGATA-ATATTCTTTTAAAGTATCAT-TAATAT-TATATTAA------------------ 1314
***** * * * * ** * * * *** ** ** *
consensus_13621#0 GTTTGCAAATGCGTAGTACAAGCCACCGACAAATAGTGAATTGGTGATGTGATATCGTGC 1430
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TGCAAAATCTGCAATATGCAGAGAACGATAGTTAACTTTTGCAAATTCTTTGTGTGTTGA 1490
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 GTCGGCAACTAGGACACGCTCTCACTCTCACTCACATCACACCCCAGTAATGCTGTCCCC 1550
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 AAAGATTCAGAAGATGAAAGATATATAGCCTCAATCACACCGATTTCCATGTAGTAACAA 1610
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TACTAACAAACAACGATCCTAATAGGAACACTACAGATGCAGAATTTCTATCCATTATCT 1670
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 AAAAAACTCTCGTGCCACGACAATCCAGAATTGAACAGACAGCTACGTCCAACAGGGAGG 1730
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 GTTGGATCTACTTAATTCATAGAAGGCCAAAACTTAGCTGAATCTTGTTCACGGGTATCG 1790
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 CATCAAATCAAAGTTAAAAACAGTTTAGTAGGTATAGCGATCTAACCAACAGATAACGAG 1850
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 GCTTTTGGTTGACGGCTGGCAAGTCTGTTCCGTGCAATAAAATGCAATTCATAACACTGC 1910
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 ACTATAACAAATATATCTTATAGAGATATTTTCATTTTTCTAATACTATAGAGGCATTTT 1970
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TAAAATGCCTTTACAATGTTATAGAGACATTTTGAAGAGTGTCTCATAAGTGCCTTTTGG 2030
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TGAATTGTCGCATTTTTAAAATGCCTTTACAGTGTTATAGAGACATTTTGAAGAGTGTCT 2090
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 CATAAATACCTTTTGGTGAATTGTCTCTACAAACTAAGAGGTGAATTGTCTCTACGAACT 2150
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 AAGAGGACATTTTGAAGAGTATCTCATAAGTGCCTTTTGGTGAATTGTTTCTACGAACTA 2210
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 AGAGGCATTTTATAAGATGTCTCTATGCAAATAGAGGCACGCACTAACCATCTCAACCTC 2270
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 ATATAATTATATGTAAGTATGTGATTTGTGTTACTTATATCTAGTTACTTGATATATATT 2330
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 AATATTTGAAAAAATGCCTTTACATCGTTTTAAATGCCTTAAGAAAATGCATTTACATAT 2390
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 GAGACAAATTTTAAAGTGCCGAAAATGTGTCTCTACGAGATAAACTTAACAAAGTATACT 2450
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 AAAAATGTCTCTAGAGTAAAAATATTTTAGACGATTTTGAAAGTGCCTCTAAAAAGTGTC 2510
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TCTAGACTATAGAGCTTCAAAACTTAGAGGCATTTTAAAAATTGTCTCTACAAAAGATTC 2570
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TTTATATAAGGTTTTTGATGTAGTGCTGTTTTATTTAGAGAGTGTAGCACAGATATTGAC 2630
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 ACACTAACTGACCAAGATTTTTATTAACGTTAGTGGTTAAAGGTGTGCAAAAAATGCCAA 2690
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 GACAAACATTCAGCTCTTGTACTGTCCTGTATCTGTACTTGTGAGTTAGTAGCAAATTAG 2750
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 TAGCTAGCTAGATTCTATAAAAGGGGGGAAGTGATGCAGCTTATATAAGGGAGAAACGTG 2810
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 ATGTAACTGGCCTCCTACTTCTCTGAGAGAGTGACTATTTACTAATCCTTAATTTGAAAG 2870
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 ATCAAGAAATGAGTTACATTGTATTTATTCAATGTGTAAAAGCTGAAATAATATATACAT 2930
consensus_13621#1 ------------------------------------------------------------
consensus_13621#0 ACA 2933
consensus_13621#1 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||