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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13629#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1366 fasta sequence
[CATCTCGTCCCCACTCTTCCCGGCGCGGCGGTTGCTCTCCAGCCATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA-AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC-TTTACAACTGA-TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACATTTATATCTTAAAATCATTGCATGTGGCATGTATGATC]
[+] EMBL AK069647 [CATCTCGTCCCCACTCTTCCCGGCGCGGCGGTTGCTCTCCAGCCATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACATTTATATCTTAAAATCATTGCATGTGGCATGTATGAT ]
[+] EMBL AK104789 [ ATCTCGTCCCCCCTCTTCCCGGCGCGGCGGTTGCTCTCCAGCCATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACA ]
[+] EMBL AU082266 [ TCTTCCCGGCGCGGCGGTTGCTCTCCAGCCATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGG GTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCA ]
[+] EMBL CB646579 [ CGGTTGCTCTCCAGCCATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCCCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTC ]
[+] EMBL CB682499 [ CAGCCATGGCCGCCGCCGCCGCCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGCCGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAGCGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACTCTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATGAAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGGAGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAAGAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGGCACAAATGTT ]
[+] EMBL CA765514 [ TTGCAAGAGAGGTTGCTTCTGTCACTAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCAATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATTACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTNCACTGGAGCTCTCTGTCGCTAGCTGNGTAGCTGCATTGNCTATTGCTTGGTAACATGNGGATCTCTANAGNTTTTANGCTAGAATAGCTTATCC AATNCTGGTTCCTTGGACAACCTTTGAGC AAAATAAAAAAACCAATGGTAACAGAAATTTT ]
[-] EMBL CB659687 [ ACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACAT ]
[-] EMBL CB656110 [ ACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACAT ]
[-] EMBL CB682500 [ CATTGGCATGTGGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCATTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACAT ]
[-] EMBL CB646580 [ CCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATGTAGAGCAATCTGATAAATCACATT ]
[-] EMBL CF326589 [ CCATACATACGCCGAAGAGCTGTCAGGCATTTAGAGA AAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTC TTTACAACTGA TACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATGCAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACATTTATATCTTAAAATCATTGCATGTGGCAaaaaaaaac]
[+] EMBL AU055914 [ CTGTCAGGCATTTAGAGANAAGGAAGAGTTGTTATATTTGCTGCTGGTACAGGGAACCCATTCTTTTACAACTGATTACAGCTGCTGCTCTTCGTTGTNCAGAAATCAATGCAGAGGTNGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTAACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCTCAGTAATGGACATGACTGCCATTACGCTATGCCAAGAAAACAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCACGTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAGAAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCATTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCAAATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATTTTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTGATAAATCACATTTATATCTTAAAAaaaaaaaaa ]
consensusID : consensus_13629#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 259 fasta sequence
[CCGCCTNCTTGANGCTGTGAGCNAACATCAAGTNCAAACAAAAAACCGNTCNGTTNNGGGACATGACTGCCATTACCCTATGCCAAGNAAAANAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCCAAAGCTATTGTTGGTGAAAANGTTGGCNCCTNTATANGCTGCCCNACACATCAGGACCAGATTGTGGGGAATCCCTGGATCCCAAAAGAACATCGGTGNACGAGTNCTGATTTCACCN]
[+] EMBL BE228731 [CCGCCTNCTTGANGCTGTGAGCNAACATCAAGTNCAAACAAAAAACCGNTCNGTTNNGGGACATGACTGCCATTACCCTATGCCAAGNAAAANAACATTCCTGTTGTCGTGTTTAATTTGCAAAAACCTGGAAATATTGCCAAAGCTATTGTTGGTGAAAANGTTGGCNCCTNTATANGCTGCCCNACACATCAGGACCAGATTGTGGGGAATCCCTGGATCCCAAAAGAACATCGGTGNACGAGTNCTGATTTCACCN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13629#0 CATCTCGTCCCCACTCTTCCCGGCGCGGCGGTTGCTCTCCAGCCATGGCCGCCGCCGCCG 60
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 CCGCCGCCGTCGCCTGCGGCATGTCTACGTCCTTCCTCATCCGCCTCTCGCCTTCGCCGC 120
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 CGGCGTCTTCCCACGTGCCTCTCCCTCGGTCTCCGGCTTCGTCGGCGCGCCCGCGGCGAG 180
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 CGTCTTCCGTCTCCCTCTCCACCGCGCCTAGGCCGAGGGCACGCGCCGCCGGCTCCGACT 240
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 CTCCCTCCAACTTTGGAGGTCAAACATCACTGATGCCACCATTCAGCCTTATGCTTGATG 300
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 AAGGCTCTAGATCTAAAAAGCCATATAGATGGCAAAGGGTGTTGCTTAAAGTAAGTGGGG 360
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 AGGCTCTTGCTGGAGATCACACAGAAAATATTGATCCAAAGATCACGATGGCAATTGCAA 420
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 GAGAGGTTGCTTCTGTCACCAGACTAGGTGTAGAGGTTGCTATTGTTGTTGGTGGCGGCA 480
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 ATATCTTCCGCGGGGCCTCTTGGGCTGGATGTAGTGGACTCGACCGCTCATCAGCAGATT 540
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 ACATTGGCATGTTGGCTACTGTGATGAATGCCATATTTCTTCAAGCAACAATGGAGAGCA 600
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 TTGGAATACCAACCCGTGTCCAAACTGCATTTCGTATGTCAGAAGTTGCAGAACCATACA 660
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 TACGCCGAAGAGCTGTCAGGCATTTAGAGAAAGGAAGAGTTGTTATATTTGCTGCTGGTA 720
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 CAGGGAACCCATTCTTTACAACTGATACAGCTGCTGCTCTTCGTTGTGCAGAAATCAATG 780
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 CAGAGGTAGTACTTAAGGCAACAAATGTTGACGGTGTGTACGACGCAGACCCCAAGCGTA 840
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 ACCCAAATGCCCGCCTTCTTGAGGCTGTGAGCTACCATGAGGTGCAAACAAGAGACCTCT 900
consensus_13629#1 ----------CCGCCTNCTTGANGCTGTGAGCNAACATCAAGTNCAAACAAAAAACCGNT 50
****** ***** ********* * *** * ** ******* * *** *
consensus_13629#0 CAGTAATGG-ACATGACTGCCATTACGCTATGCCAAGAAAA-CAACATTCCTGTTGTCGT 958
consensus_13629#1 CNGTTNNGGGACATGACTGCCATTACCCTATGCCAAGNAAAANAACATTCCTGTTGTCGT 110
* ** ** **************** ********** *** *****************
consensus_13629#0 GTTTAATTTGCAAAAACCTGGAAATATTGCGAAAGCTATTGTTGGTGAGAAGGTTGGCAC 1018
consensus_13629#1 GTTTAATTTGCAAAAACCTGGAAATATTGCCAAAGCTATTGTTGGTGAAAANGTTGGCNC 170
****************************** ***************** ** ****** *
consensus_13629#0 GTTTATAGGCTGCACAAAAGATCAGGACCAGATTGTGGGGAATGCACTGGATCAAGAAAG 1078
consensus_13629#1 CTNTATANGCTGCCCNACACATCAGGACCAGATTGTGGGGAATCC-CTGGATCCCAAAAG 229
* **** ***** * * * *********************** * ******* ****
consensus_13629#0 AAGATTGGTGAACGAGTTATGATTTCACTGGAGCTCTCTGTCGCTAGCTGTGTAGCTGCA 1138
consensus_13629#1 AACATCGGTGNACGAGTNCTGATTTCACCN------------------------------ 259
** ** **** ****** *********
consensus_13629#0 TTGCCTATTGCTTGGTAACATGTGGATCTCTAGAGTTTTTAGGCTAGAATAGCTTATCCA 1198
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 AATCCTGGTTCCTTGTACAACCTTTGAGCAAAAATAAAAAAACCAATGGTAACAGAGATT 1258
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 TTCCAGCTGATATAGCTGCTATGTTGTCATACTATGTACAATGGAATCTAGAGCAATCTG 1318
consensus_13629#1 ------------------------------------------------------------
consensus_13629#0 ATAAATCACATTTATATCTTAAAATCATTGCATGTGGCATGTATGATC 1366
consensus_13629#1 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||