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Oryza sativa
cluster # 1364 cluster # 1364       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1364#0 length = 780 sequences # 2  

consensusID : consensus_1364#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 780
fasta sequence
                              [ATGCCATGGCCGCCGTCGCTGCCACCGCGCCGGCGACCTCCGTGACCGCCGCTACCTTCTCGCCATCCCTCCCATTGCTCTCTCGCTACCAACTCCCCCGCGCCCACCGGGCCGCGTCCACCGTGGCGTTCGCCGCGCGCCGCTTCCGCGGCGTAAACCCTAGCAGCGACCGCCCCCGCGGGAGGCGCGCCTCCGTCCCGGCCGCTCCCACCACCTCCGCCGCCCGCGACGACGGCGGCGGCGGCGGCGGCATCGATGCCCTCGAGGCGGAGCTCTGGCGCCTCCATCGCCGGGCGGAGCTGCGCCTTCACCGCCTCGCCGCCGAGGCCGACGAGGCCTACCGCGACCTCCGCTACTCCGCCCGCGTCGTCGGCGGGGACCGCGTCGTCCTCACCTTCCGCCGCTCGTCCCTGCGCTTCGCCGCCGCCGCGCTCCTCTGGTCGCTCGCGCTCTCCGCCGCGGCGTGGGCGCTGCTGGGGTGGGCCGTCCGCGCCTGGCAGCGGCGGGGCCTGGGGTGGCGCGGAGGGGAAGGCGCGGCCGTAGTGCGGAGGAGGGACCGCAGCCTGGGTGGCAAGGAGGTGGTGGTCGCTGTGTCGTCGTCCCCGGTGGCGGCTCCAGTCAGCCGTGTGCCTGAGCCGGCAAGAGAGGTCAAGAGGAGGGAACCAAAGGCAAGGCTTCCGGAATGGTGGCCGGAATTGAGAGAGGAGGTGGTGGTGGATCATGGGCCAGGGATGGAAAAGTGGGCGAGATTAGCGAATAGATTGGTCCGAGGTAATTTAT]

[+] EMBL CB644317             [ATGCCATGGCCGCCGTCGCTGCCACCGCGCCGGCGACCTCCGTGACCGCCGCTACCTTCTCGCCATCCCTCCCATTGCTCTCTCGCTACCAACTCCCCCGCGCCCACCGGGCCGCGTCCACCGTGGCGTTCGCCGCGCGCCGCTTCCGCGGCGTAAACCCTAGCAGCGACCGCCCCCGCGGGAGGCGCGCCTCCGTCCCGGCCGCTCCCACCACCTCCGCCGCCCGCGACGACGGCGGCGGCGGCGGCGGCATCGATGCCCTCGAGGCGGAGCTCTGGCGCCTCCATCGCCGGGCGGAGCTGCGCCTTCACCGCCTCGCCGCCGAGGCCGACGAGGCCTACCGCGACCTCCGCTACTCCGCCCGCGTCGTCGGCGGGGACCGCGTCGTCCTCACCTTCCGCCGCTCGTCCCTGCGCTTCGCCGCCGCCGCGCTCCTCTGGTCGCTCGCGCTCTCCGCCGCGGCGTGGGCGCTGCTGGGGTGGGCCGTCCGCGCCTGGCAGCGGCGGGGCCTGGGGTGGCGCGGAGGGGAAGGCGCGGCCGTAGTGCGGAGGAGGGACCGCAGCCTGGGTGGCAAGGAGGTGGTGGTCGCTGTGTCGTCGTCCCCGGTGGCGGCTCCAGTCAGCCGTGTGCCTGAGCCGGCAAGAGAGGTCAAGAGGAGGGAACCAAAGGCAAGGCTTCCGGAATGGTGGCCGGAATTGAGAGAGGAGGTGGTGGTGGATCATGGGCCAGGGATGGAAAAGTGGGCGAGATTAGCGAATAGATTGGTCCGAGGTAATTTAT]
[+] EMBL CB644312             [                                                                                                                                                                                                                                                                 GCCCTCGAGGCGGAGCTGTGGCGCCTCCATCGCCGGGCGGAGCTGCGCCTTCACCGCCTCGCCGCCGAGGCCGACGAGGCCTACCGCGACCTCCGCTACTCCGCCCGCGTCGTCGGCGGGGACCGCGTCGTCCTCACCTTCCGCCGCTCGTCCCTGCGCTTCGCCGCCGCCGCGCTCCTCTGGTCGCTCGCGCTCTCCGCCGCGGCGTGGGCGCTGCTGGGGTGGGCCGTCCGCGCCTGGCAGCGGCGGGGCCTGGGGTGGCGCGGAGGGGAAGGCGCGGCCGTAGTGCGGAGGAGGGACCGCAGCCTGGGTGGCAAGGAGGTGGTGGTCGCTGTGTCGTCGTCCCCGGTGGCGGCTCCAGTCAGCCGTGTGCCTGAGCCGGCAAGAGAGGTCAAGAGGAGGGAACC                                                                                                                    ]


>consensus_1364#0 ATGCCATGGCCGCCGTCGCTGCCACCGCGCCGGCGACCTCCGTGACCGCCGCTACCTTCT CGCCATCCCTCCCATTGCTCTCTCGCTACCAACTCCCCCGCGCCCACCGGGCCGCGTCCA CCGTGGCGTTCGCCGCGCGCCGCTTCCGCGGCGTAAACCCTAGCAGCGACCGCCCCCGCG GGAGGCGCGCCTCCGTCCCGGCCGCTCCCACCACCTCCGCCGCCCGCGACGACGGCGGCG GCGGCGGCGGCATCGATGCCCTCGAGGCGGAGCTCTGGCGCCTCCATCGCCGGGCGGAGC TGCGCCTTCACCGCCTCGCCGCCGAGGCCGACGAGGCCTACCGCGACCTCCGCTACTCCG CCCGCGTCGTCGGCGGGGACCGCGTCGTCCTCACCTTCCGCCGCTCGTCCCTGCGCTTCG CCGCCGCCGCGCTCCTCTGGTCGCTCGCGCTCTCCGCCGCGGCGTGGGCGCTGCTGGGGT GGGCCGTCCGCGCCTGGCAGCGGCGGGGCCTGGGGTGGCGCGGAGGGGAAGGCGCGGCCG TAGTGCGGAGGAGGGACCGCAGCCTGGGTGGCAAGGAGGTGGTGGTCGCTGTGTCGTCGT CCCCGGTGGCGGCTCCAGTCAGCCGTGTGCCTGAGCCGGCAAGAGAGGTCAAGAGGAGGG AACCAAAGGCAAGGCTTCCGGAATGGTGGCCGGAATTGAGAGAGGAGGTGGTGGTGGATC ATGGGCCAGGGATGGAAAAGTGGGCGAGATTAGCGAATAGATTGGTCCGAGGTAATTTAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)